FFCP PHASE1:Hg19::chr1:150230182..150230198,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23632|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1372|TSSclassifier=S|UniProt=Q9ULX7|association_with_transcript=13bp_to_ENST00000369111_5end|coexpression_cluster_id=C1249|description=CAGE_peak_7_at_CA14_5end|id=chr1:150230182..150230198,+|ontology_enrichment_celltype=CL:0000148!3.82e-17!10;CL:0000541!3.82e-17!10;CL:0000147!4.44e-17!14;CL:0002322!6.87e-12!5;CL:0000710!1.74e-07!20;CL:0000133!8.35e-07!59|ontology_enrichment_celltype_v019=CL:0000148;2.31e-45;10!CL:0000147;5.39e-32;14!CL:0002322;4.43e-30;5!CL:0000710;5.88e-22;20!CL:0000075;7.05e-16;27!CL:0002321;5.55e-14;15!CL:0002077;1.38e-11;34!CL:0000540;1.01e-09;6!CL:0000404;1.01e-09;6!CL:0002567;2.74e-08;3!CL:0002566;7.95e-07;1|ontology_enrichment_celltype_v019_2=CL:0000148,1.53e-45,10;CL:0000541,1.53e-45,10;CL:0000147,4.02e-32,14;CL:0002322,4.18e-30,5;CL:0000710,4.81e-22,20;CL:0000075,6.09e-16,27;CL:0000133,1.21e-13,59;CL:0002077,2.37e-12,34;CL:0000333,9.21e-12,41;CL:0000221,8.72e-11,72;CL:0000540,9.93e-10,6;CL:0000031,9.93e-10,6;CL:0000404,9.93e-10,6;CL:0002567,2.64e-08,3;CL:0000047,2.12e-07,8;CL:0002566,6.12e-07,1|ontology_enrichment_development_v019=CL:0000031;1.01e-09;6!CL:0000133;1.52e-07;59!UBERON:0005754;4.57e-07;1!UBERON:0004140;4.57e-07;1!UBERON:0010227;7.95e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.24e-27!115;UBERON:0005743!5.98e-25!86;UBERON:0000073!1.39e-24!94;UBERON:0001016!1.39e-24!94;UBERON:0001017!6.57e-22!82;UBERON:0001049!1.88e-20!57;UBERON:0005068!1.88e-20!57;UBERON:0006241!1.88e-20!57;UBERON:0007135!1.88e-20!57;UBERON:0003075!2.34e-20!86;UBERON:0007284!2.34e-20!86;UBERON:0002346!3.07e-20!90;UBERON:0002616!2.11e-16!59;UBERON:0000955!3.80e-15!69;UBERON:0006238!3.80e-15!69;UBERON:0000924!3.57e-14!173;UBERON:0006601!3.57e-14!173;UBERON:0004121!5.27e-14!169;UBERON:0001893!7.38e-14!34;UBERON:0002020!8.98e-14!34;UBERON:0003528!8.98e-14!34;UBERON:0002791!7.05e-13!33;UBERON:0002780!3.35e-12!41;UBERON:0001890!3.35e-12!41;UBERON:0006240!3.35e-12!41;UBERON:0003080!8.49e-12!42;UBERON:0001869!1.93e-11!32;UBERON:0002298!5.11e-11!8;UBERON:0003076!6.86e-11!15;UBERON:0003057!6.86e-11!15;UBERON:0003056!7.30e-11!61;UBERON:0000033!1.31e-09!123;UBERON:0000153!1.76e-09!129;UBERON:0007811!1.76e-09!129;UBERON:0004733!5.95e-09!12;UBERON:0002028!5.95e-09!12;UBERON:0007277!5.95e-09!12;UBERON:0002308!9.38e-09!9;UBERON:0000125!9.38e-09!9;UBERON:0004732!3.77e-08!13;UBERON:0003135!9.38e-08!11;UBERON:0000956!1.26e-07!25;UBERON:0000203!1.26e-07!25;UBERON:0002619!1.93e-07!22;UBERON:0006947!6.35e-07!3;UBERON:0004054!6.35e-07!3;UBERON:0001950!8.36e-07!20|ontology_enrichment_uberon_v019=UBERON:0006947;1.06e-08;3!UBERON:0004054;1.06e-08;3!UBERON:0001896;1.92e-08;3!UBERON:0005290;1.92e-08;3!UBERON:0001000;3.20e-07;1!UBERON:0005352;3.20e-07;1!UBERON:0000998;4.57e-07;1!UBERON:0006868;4.57e-07;1!UBERON:0002336;7.95e-07;1!UBERON:0002079;7.95e-07;1!UBERON:0011215;7.95e-07;1!UBERON:0001018;7.95e-07;1!UBERON:0002473;7.95e-07;1!UBERON:0005340;7.95e-07;1!UBERON:0003544;7.95e-07;1!UBERON:0005970;7.95e-07;1!UBERON:0002316;7.95e-07;1!UBERON:0001020;7.95e-07;1!UBERON:0002437;7.95e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.10e-08,3;UBERON:0004054,1.10e-08,3;UBERON:0001896,2.03e-08,3;UBERON:0005290,2.03e-08,3;UBERON:0010096,2.03e-08,3;UBERON:0001000,2.84e-07,1;UBERON:0005352,2.84e-07,1;UBERON:0000998,5.45e-07,1;UBERON:0006868,5.45e-07,1;UBERON:0002079,6.49e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46460642486856,5.30119073285941,6.73924868643207,4.45742536566093,3.5324919122588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927443239800615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46045156871989,1.14596527667483,1.17217447210047,0,2.46785982487976,4.50514586765876,4.28739648945867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,3.52519434720661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,16.2566564258555,0,0.276283915531148,0,0,0,0,0,0,0,0.887790650732402,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23632 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1372 | |||
|TSSclassifier=S | |||
|UniProt=Q9ULX7 | |||
|association_with_transcript=13bp_to_ENST00000369111_5end | |||
|coexpression_cluster_id=C1249 | |||
|description=CAGE_peak_7_at_CA14_5end | |||
|id=chr1:150230182..150230198,+ | |||
|ontology_enrichment_celltype=CL:0000148!3.82e-17!10;CL:0000541!3.82e-17!10;CL:0000147!4.44e-17!14;CL:0002322!6.87e-12!5;CL:0000710!1.74e-07!20;CL:0000133!8.35e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.31e-45;10!CL:0000147;5.39e-32;14!CL:0002322;4.43e-30;5!CL:0000710;5.88e-22;20!CL:0000075;7.05e-16;27!CL:0002321;5.55e-14;15!CL:0002077;1.38e-11;34!CL:0000540;1.01e-09;6!CL:0000404;1.01e-09;6!CL:0002567;2.74e-08;3!CL:0002566;7.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.53e-45,10;CL:0000541,1.53e-45,10;CL:0000147,4.02e-32,14;CL:0002322,4.18e-30,5;CL:0000710,4.81e-22,20;CL:0000075,6.09e-16,27;CL:0000133,1.21e-13,59;CL:0002077,2.37e-12,34;CL:0000333,9.21e-12,41;CL:0000221,8.72e-11,72;CL:0000540,9.93e-10,6;CL:0000031,9.93e-10,6;CL:0000404,9.93e-10,6;CL:0002567,2.64e-08,3;CL:0000047,2.12e-07,8;CL:0002566,6.12e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000031;1.01e-09;6!CL:0000133;1.52e-07;59!UBERON:0005754;4.57e-07;1!UBERON:0004140;4.57e-07;1!UBERON:0010227;7.95e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.24e-27!115;UBERON:0005743!5.98e-25!86;UBERON:0000073!1.39e-24!94;UBERON:0001016!1.39e-24!94;UBERON:0001017!6.57e-22!82;UBERON:0001049!1.88e-20!57;UBERON:0005068!1.88e-20!57;UBERON:0006241!1.88e-20!57;UBERON:0007135!1.88e-20!57;UBERON:0003075!2.34e-20!86;UBERON:0007284!2.34e-20!86;UBERON:0002346!3.07e-20!90;UBERON:0002616!2.11e-16!59;UBERON:0000955!3.80e-15!69;UBERON:0006238!3.80e-15!69;UBERON:0000924!3.57e-14!173;UBERON:0006601!3.57e-14!173;UBERON:0004121!5.27e-14!169;UBERON:0001893!7.38e-14!34;UBERON:0002020!8.98e-14!34;UBERON:0003528!8.98e-14!34;UBERON:0002791!7.05e-13!33;UBERON:0002780!3.35e-12!41;UBERON:0001890!3.35e-12!41;UBERON:0006240!3.35e-12!41;UBERON:0003080!8.49e-12!42;UBERON:0001869!1.93e-11!32;UBERON:0002298!5.11e-11!8;UBERON:0003076!6.86e-11!15;UBERON:0003057!6.86e-11!15;UBERON:0003056!7.30e-11!61;UBERON:0000033!1.31e-09!123;UBERON:0000153!1.76e-09!129;UBERON:0007811!1.76e-09!129;UBERON:0004733!5.95e-09!12;UBERON:0002028!5.95e-09!12;UBERON:0007277!5.95e-09!12;UBERON:0002308!9.38e-09!9;UBERON:0000125!9.38e-09!9;UBERON:0004732!3.77e-08!13;UBERON:0003135!9.38e-08!11;UBERON:0000956!1.26e-07!25;UBERON:0000203!1.26e-07!25;UBERON:0002619!1.93e-07!22;UBERON:0006947!6.35e-07!3;UBERON:0004054!6.35e-07!3;UBERON:0001950!8.36e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.06e-08;3!UBERON:0004054;1.06e-08;3!UBERON:0001896;1.92e-08;3!UBERON:0005290;1.92e-08;3!UBERON:0001000;3.20e-07;1!UBERON:0005352;3.20e-07;1!UBERON:0000998;4.57e-07;1!UBERON:0006868;4.57e-07;1!UBERON:0002336;7.95e-07;1!UBERON:0002079;7.95e-07;1!UBERON:0011215;7.95e-07;1!UBERON:0001018;7.95e-07;1!UBERON:0002473;7.95e-07;1!UBERON:0005340;7.95e-07;1!UBERON:0003544;7.95e-07;1!UBERON:0005970;7.95e-07;1!UBERON:0002316;7.95e-07;1!UBERON:0001020;7.95e-07;1!UBERON:0002437;7.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.10e-08,3;UBERON:0004054,1.10e-08,3;UBERON:0001896,2.03e-08,3;UBERON:0005290,2.03e-08,3;UBERON:0010096,2.03e-08,3;UBERON:0001000,2.84e-07,1;UBERON:0005352,2.84e-07,1;UBERON:0000998,5.45e-07,1;UBERON:0006868,5.45e-07,1;UBERON:0002079,6.49e-07,1 | |||
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|short_description=p7@CA14 | |||
}} |
Revision as of 00:13, 12 September 2013
Short description: | p7@CA14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_CA14_5end |
Coexpression cluster: | C1249_Melanocyte_anaplastic_Wilms_retina_heart_optic_teratocarcinoma |
Association with transcript: | 13bp_to_ENST00000369111_5end |
EntrezGene: | CA14 |
HGNC: | 1372 |
UniProt: | Q9ULX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.53e-45 | 10 |
melanoblast | 1.53e-45 | 10 |
pigment cell | 4.02e-32 | 14 |
embryonic stem cell | 4.18e-30 | 5 |
neurecto-epithelial cell | 4.81e-22 | 20 |
columnar/cuboidal epithelial cell | 6.09e-16 | 27 |
neurectodermal cell | 1.21e-13 | 59 |
ecto-epithelial cell | 2.37e-12 | 34 |
migratory neural crest cell | 9.21e-12 | 41 |
ectodermal cell | 8.72e-11 | 72 |
neuron | 9.93e-10 | 6 |
neuroblast | 9.93e-10 | 6 |
electrically signaling cell | 9.93e-10 | 6 |
light melanocyte | 2.64e-08 | 3 |
neuronal stem cell | 2.12e-07 | 8 |
dark melanocyte | 6.12e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.10e-08 | 3 |
internal male genitalia | 1.10e-08 | 3 |
medulla oblongata | 2.03e-08 | 3 |
myelencephalon | 2.03e-08 | 3 |
future myelencephalon | 2.03e-08 | 3 |
vas deferens | 2.84e-07 | 1 |
spermatic cord | 2.84e-07 | 1 |
seminal vesicle | 5.45e-07 | 1 |
seminal fluid secreting gland | 5.45e-07 | 1 |
left cardiac atrium | 6.49e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.