FFCP PHASE1:Hg19::chr1:155100387..155100398,+: Difference between revisions
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{{FFCP | 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246740773428,1.03423011972439,0,0.347249989866585,0,1.32656082487949,0,0.221158519862449,0.886642856860642,0.658156191461918,1.30726156222788,8.08657716815899,1.23120413606075,2.39278317278703,4.84184199214926,14.6304960387929,7.17072654685253,7.97502899329799,1.4655614944298,12.2597998484286,0,0.156980256395025,0,0,0,0,0,0.158936578980379,4.21996129056054,3.26465616318295,1.55488378577335,1.08194319871046,0,4.0690479671536,12.8316330436061,0,0,0,1.7524294574976,0,0.468528891450678,0,1.9566461893209,0.485560759068186,1.18375320854817,2.41981432097328,0,1.83241080922615,0,0.103688191397247,1.32930774541437,0.661983911750998,0.313932918407225,0,0.569219092059585,1.24807205711825,1.90915712168644,1.86185555087318,1.48000651186684,2.62090002363045,0.343972064943233,1.83837029449262,3.06975131761979,1.39596276990456,1.45483524732629,0.706049013532002,2.48578814858586,0,0.596143835108969,0.443175571691151,4.10657903743086,3.28651163031288,1.06726497369676,3.9961921916426,1.00863292007874,0.114536596165916,1.71594997861965,0.432164393964449,0.745515213392595,2.12124631155116,2.03856309110421,0.836822770498666,0.611989305817931,0.577901179803038,0,0.684526894459965,0,0,0,2.23425921017803,0.458320848023367,0,4.3929380109778,0.858452096273142,1.33902874465124,0.739018197353989,0,4.65983798109815,2.91497774536727,4.45045635258299,3.16796656114669,0.393709926058995,0,0,0.272406812223151,0,0.275078873194468,0.415440338029185,0.2249738915515,9.2856234546954,0.789744236554321,3.01891218839339,2.52178263357434,2.15063811353492,0.105600336519406,12.729401092632,1.15149118391667,2.1440859791201,0,0.25426853765475,0,0,0,0,0,0,0.566560457600628,9.96555189010961,6.62534444561107,1.0342636508924,0.92562821219883,0,3.52407511158336,3.31040978959853,2.67247318669432,4.97086866416635,0.992332043623902,0,0,0.638341257770182,0,1.5041393641362,0.306345576763462,0.327872630709804,0.628216385000937,0,0.122026264901963,1.001527445652,1.14681839138014,0.443716206147409,0.745156835296601,0.553394539744923,0.74988244777264,0.151649117541648,0.285465333544967,0.705797459094515,0.936669811613763,2.75349954360568,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0.859284456339908,0,0,0,0,0,0,0.385239660814607,5.78992296712299,0,1.81364740409818,0,1.71315693154527,0,2.77921302444875,4.82424909073156,0,1.54331230616732,0.506827321959218,0.512483037175893,0.690860683462397,0.303859956177382,0.414775308455192,0,0,0,0,0.245772908753719,1.05656061679314,0,0,0,0,0,1.11903606175556,0,0,0,0.157265941855896,0,0.33946505990805,0,0.123935764259002,1.11728983594649,0,0.157723490002507,0.80057074828547,0.705351887381368,0,0.385375350578757,0,0.478901577171454,0.205116364240755,0,0.553258019713743,0.322951291263702,2.85538840518309,2.45369296252564,0.353909170043221,3.85200056895526,3.00366731990879,0.381382095467167,0,2.78482710962785,1.20336525358812,0.40341013740704,2.34454203369928,8.1191075289241,3.11166643269184,3.54854606920909,0.337687923091973,0.781078098613847,1.2401207790071,0.317079050969534,0,1.64477330057155,1.98484471355718,0,4.21616011210664,0,0.336283722218824,0,0.455324382702595,3.10458295569236,0,0.857440047187092,1.35939465953663,0.460409414939944,1.89110145414349,0.444925607568277,1.41287567130925,0.785577949580009,1.12108865325516,4.56579360254748,0.431855182437243,0,0.929195074296532,0,0.116241425368125,0.347716544605159,0,1.65772931330429,2.0486217251274,2.76503864725637,1.72090943528111,0,0,1.27016115057279,14.4337327182752,11.4776362695798,0.955538938977433,9.95513343000352,1.27595303699816,1.46301509978723,0.647428837187895,1.7452677165562,1.1598144313382,1.94284397223656,0,4.3769170535501,0.713520544665411,0,0.109940516745429,0.452888530700021,4.47610117026079,4.15263164957519,4.23285566725371,0.245148321753905,2.59244201811789,0.981542335574726,0.891139200981258,1.6906229103336,0,0.563903507879121,0.709036767709349,0,2.14264726326789,2.11736923029415,1.20362050033752,3.65168194123259,0.917458566809082,0.430018749454354,1.73548718412503,1.08786384305464,0.436350690340377,0.5290268405154,0,0,0,0,0,1.14028650910293,0.305966489225945,0,1.56221329209236,0,1.06090177505535,0.267964130156178,0.829169439458779,0.827463966895162,1.49263787330687,2.14257988317366,0.387533459016037,0.620747142958579,0.448527450322454,4.39165392119338,1.41482032270754,0.870866991587845,3.08009970976753,0.80822463617505,2.7254438049217,1.66330178273007,0.244209805832924,1.70763753404345,0,0.179650404213174,0,1.22241444182866,1.62758471326295,0,1.00636896795513,0|short_description=p3@EFNA1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1942 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3221 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=23bp_to_ENST00000469878_5end | |||
|coexpression_cluster_id=C3876 | |||
|description=CAGE_peak_3_at_EFNA1_5end | |||
|id=chr1:155100387..155100398,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.05e-49!254;CL:0000223!1.03e-18!59;CL:0002139!7.09e-15!24;CL:0000076!5.06e-14!62;CL:0000115!5.97e-14!35;CL:0002078!5.52e-13!44;CL:0002076!1.50e-12!43;CL:0000213!6.41e-12!57;CL:0000215!6.41e-12!57;CL:0000071!5.64e-11!18;CL:0002546!5.64e-11!18;CL:0002321!1.65e-07!248;CL:0000220!1.66e-07!246;CL:0000181!5.01e-07!12;CL:0000417!5.01e-07!12;CL:0000668!5.01e-07!12;CL:0000414!5.01e-07!12;CL:0000412!5.01e-07!12;CL:0000182!5.01e-07!12;CL:0002251!8.81e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.24e-20;24!CL:0000115;3.78e-16;36!CL:0000071;1.39e-14;18!CL:0002076;9.60e-12;42!CL:0002078;1.23e-11;45!CL:0002251;1.97e-09;20!CL:0000213;1.68e-08;58!CL:0000215;1.68e-08;58!CL:1000413;1.30e-07;9!CL:1000449;2.64e-07;15!CL:0000076;2.70e-07;63!CL:0000182;3.29e-07;12!CL:0002138;6.01e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.33e-49,253;CL:0000223,1.31e-21,58;CL:0002139,6.47e-20,24;CL:0000115,5.19e-19,36;CL:0002078,2.86e-17,45;CL:0002076,9.75e-16,42;CL:0000071,1.56e-14,18;CL:0002546,1.56e-14,18;CL:0000213,2.54e-13,58;CL:0000215,2.54e-13,58;CL:0000076,1.25e-12,63;CL:0002251,1.82e-09,20;CL:0002321,1.36e-07,250;CL:1000413,1.66e-07,9;CL:0000182,2.43e-07,12;CL:1000449,3.65e-07,15;CL:0005020,5.51e-07,6;CL:0002138,5.51e-07,6;CL:0005022,5.51e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.39e-14;18!CL:0000223;3.11e-12;58!UBERON:0008947;5.58e-09;29!CL:0005022;6.01e-07;6 | |||
|ontology_enrichment_disease=DOID:305!1.59e-22!106;DOID:0050687!1.60e-17!143;DOID:299!2.18e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;7.87e-08;25!DOID:305;4.05e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.64e-19,106;DOID:0050687,2.13e-13,143;DOID:299,1.21e-07,25 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;1.39e-14;18!UBERON:0001986;1.39e-14;18!UBERON:0004852;1.39e-14;18!UBERON:0000487;2.59e-12;22!UBERON:0006914;5.05e-11;25!UBERON:0000490;1.66e-10;33!UBERON:0002365;8.42e-10;31!UBERON:0002330;8.42e-10;31!UBERON:0000065;6.62e-09;44!UBERON:0002423;1.61e-08;25!UBERON:0001737;2.66e-08;9!UBERON:0001557;2.66e-08;9!UBERON:0003915;1.30e-07;9!UBERON:0004700;1.30e-07;9!UBERON:0001917;1.30e-07;9!UBERON:0000353;1.51e-07;15!UBERON:0006555;2.64e-07;15!UBERON:0004819;2.64e-07;15!UBERON:0001285;2.64e-07;15!UBERON:0007684;2.64e-07;15!UBERON:0000072;8.29e-07;37 | |||
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| |||
|short_description=p3@EFNA1 | |||
}} |
Revision as of 00:42, 12 September 2013
Short description: | p3@EFNA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_EFNA1_5end |
Coexpression cluster: | C3876_colon_liver_Hepatocyte_choriocarcinoma_chorionic_Renal_serous |
Association with transcript: | 23bp_to_ENST00000469878_5end |
EntrezGene: | EFNA1 |
HGNC: | 3221 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.33e-49 | 253 |
endodermal cell | 1.31e-21 | 58 |
endothelial cell of vascular tree | 6.47e-20 | 24 |
endothelial cell | 5.19e-19 | 36 |
meso-epithelial cell | 2.86e-17 | 45 |
endo-epithelial cell | 9.75e-16 | 42 |
blood vessel endothelial cell | 1.56e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.56e-14 | 18 |
lining cell | 2.54e-13 | 58 |
barrier cell | 2.54e-13 | 58 |
squamous epithelial cell | 1.25e-12 | 63 |
epithelial cell of alimentary canal | 1.82e-09 | 20 |
embryonic cell | 1.36e-07 | 250 |
endothelial cell of artery | 1.66e-07 | 9 |
hepatocyte | 2.43e-07 | 12 |
epithelial cell of nephron | 3.65e-07 | 15 |
lymphangioblast | 5.51e-07 | 6 |
endothelial cell of lymphatic vessel | 5.51e-07 | 6 |
vascular lymphangioblast | 5.51e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.64e-19 | 106 |
cell type cancer | 2.13e-13 | 143 |
adenocarcinoma | 1.21e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.