FFCP PHASE1:Hg19::chr1:158985536..158985545,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3428|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5395|TSSclassifier=S|UniProt=|association_with_transcript=73bp_to_ENST00000474473_5end|coexpression_cluster_id=C1841|description=CAGE_peak_18_at_IFI16_5end|id=chr1:158985536..158985545,+|ontology_enrichment_celltype=CL:0000839!4.55e-17!70;CL:0000766!5.06e-17!76;CL:0000557!1.14e-16!71;CL:0002057!1.52e-13!42;CL:0002194!3.40e-13!63;CL:0000576!3.40e-13!63;CL:0000040!3.40e-13!63;CL:0000559!3.40e-13!63;CL:0000763!4.57e-13!112;CL:0000049!4.57e-13!112;CL:0002009!1.64e-12!65;CL:0000860!3.76e-12!45;CL:0002031!2.62e-10!124;CL:0002032!1.80e-09!165;CL:0000837!1.80e-09!165;CL:0002274!5.13e-09!5;CL:0000457!5.13e-09!5;CL:0002191!5.13e-09!5;CL:0000097!5.13e-09!5;CL:0000831!5.13e-09!5;CL:0002028!5.13e-09!5;CL:0000738!5.56e-09!140;CL:0000037!1.54e-08!172;CL:0000566!1.54e-08!172;CL:0000988!2.99e-08!182;CL:0002087!2.03e-07!119|ontology_enrichment_celltype_v019=CL:0000097;4.21e-33;5!CL:0000860;5.29e-20;33!CL:0002057;5.29e-20;33!CL:0000163;2.43e-18;9!CL:0000473;1.72e-17;39!CL:0000234;1.72e-17;39!CL:0000148;8.76e-16;10!CL:0000766;1.07e-11;69!CL:0000147;3.15e-11;14!CL:0000576;3.61e-10;48!CL:0002573;4.29e-10;2!CL:0002566;6.97e-08;1!CL:0000710;8.49e-08;20!CL:0000151;2.34e-07;36|ontology_enrichment_celltype_v019_2=CL:0000097,3.47e-33,5;CL:0002028,3.47e-33,5;CL:0000839,1.33e-24,66;CL:0000557,3.43e-24,67;CL:0000766,2.68e-22,72;CL:0000163,2.19e-18,9;CL:0000473,4.32e-17,48;CL:0000234,4.32e-17,48;CL:0000860,1.18e-16,42;CL:0002057,1.18e-16,42;CL:0000148,1.32e-15,10;CL:0000541,1.32e-15,10;CL:0000763,8.47e-14,108;CL:0000049,8.47e-14,108;CL:0002194,3.18e-13,59;CL:0000576,3.18e-13,59;CL:0000040,3.18e-13,59;CL:0000559,3.18e-13,59;CL:0002009,1.00e-12,61;CL:0002031,4.32e-12,120;CL:0000147,4.20e-11,14;CL:0000738,2.79e-10,136;CL:0002573,4.20e-10,2;CL:0002032,3.56e-08,161;CL:0000837,3.56e-08,161;CL:0000151,3.83e-08,36;CL:0002566,7.97e-08,1;CL:0000710,1.03e-07,20;CL:0000037,1.07e-07,168;CL:0000988,3.85e-07,177|ontology_enrichment_development_v019=CL:0002057;9.89e-14;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;4.50e-08;1!DOID:4549;4.50e-08;1!DOID:5861;4.50e-08;1!DOID:6496;4.50e-08;1|ontology_enrichment_disease_v019_2=DOID:3371,4.07e-08,1;DOID:4549,4.07e-08,1;DOID:5861,4.07e-08,1;DOID:6496,4.07e-08,1|ontology_enrichment_uberon=UBERON:0002371!1.54e-14!80;UBERON:0001474!7.48e-14!86;UBERON:0002193!3.50e-12!112;UBERON:0002405!7.60e-12!115;UBERON:0002390!8.80e-12!102;UBERON:0003061!8.80e-12!102;UBERON:0004765!3.55e-10!101;UBERON:0001434!3.55e-10!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001474,8.71e-22,82;UBERON:0002405,4.60e-21,93;UBERON:0002371,5.82e-21,76;UBERON:0004765,1.50e-19,90;UBERON:0002193,1.23e-17,108;UBERON:0001434,2.97e-17,100;UBERON:0002390,1.54e-15,98;UBERON:0003061,1.54e-15,98;UBERON:0002204,6.30e-09,167|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0.647787332037959,0,0.436194716338694,1.13362783106643,0.485168122375632,0,0.411167888021826,0,1.43846196161075,1.7931249457037,2.36482229888585,0,0.645484683583826,2.70852973188684,0,0,0,0.612167784741805,0.641858054152187,0,1.9791078011203,2.59302754908121,2.55734850319616,0.290209238628584,0.56738522469114,0,3.51748131359441,3.12889751052121,3.9093992046921,0.605399502633369,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.398873881556595,0,0,0,0,0,0,0,0,0,0,1.55050055501597,1.77883131343355,0.33472061276467,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.794455084879313,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.468008530278475,0.594524649154913,0,0,0,0,0,0,10.3459279958148,1.67292024625129,6.01251535068239,3.45887888200707,2.65109110195398,2.41291998310242,0,1.17217447210047,0,1.02827492703324,2.70308752059526,1.14330573052231,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.112085143993527,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3428 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=73bp_to_ENST00000474473_5end | |||
|coexpression_cluster_id=C1841 | |||
|description=CAGE_peak_18_at_IFI16_5end | |||
|id=chr1:158985536..158985545,+ | |||
|ontology_enrichment_celltype=CL:0000839!4.55e-17!70;CL:0000766!5.06e-17!76;CL:0000557!1.14e-16!71;CL:0002057!1.52e-13!42;CL:0002194!3.40e-13!63;CL:0000576!3.40e-13!63;CL:0000040!3.40e-13!63;CL:0000559!3.40e-13!63;CL:0000763!4.57e-13!112;CL:0000049!4.57e-13!112;CL:0002009!1.64e-12!65;CL:0000860!3.76e-12!45;CL:0002031!2.62e-10!124;CL:0002032!1.80e-09!165;CL:0000837!1.80e-09!165;CL:0002274!5.13e-09!5;CL:0000457!5.13e-09!5;CL:0002191!5.13e-09!5;CL:0000097!5.13e-09!5;CL:0000831!5.13e-09!5;CL:0002028!5.13e-09!5;CL:0000738!5.56e-09!140;CL:0000037!1.54e-08!172;CL:0000566!1.54e-08!172;CL:0000988!2.99e-08!182;CL:0002087!2.03e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.21e-33;5!CL:0000860;5.29e-20;33!CL:0002057;5.29e-20;33!CL:0000163;2.43e-18;9!CL:0000473;1.72e-17;39!CL:0000234;1.72e-17;39!CL:0000148;8.76e-16;10!CL:0000766;1.07e-11;69!CL:0000147;3.15e-11;14!CL:0000576;3.61e-10;48!CL:0002573;4.29e-10;2!CL:0002566;6.97e-08;1!CL:0000710;8.49e-08;20!CL:0000151;2.34e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.47e-33,5;CL:0002028,3.47e-33,5;CL:0000839,1.33e-24,66;CL:0000557,3.43e-24,67;CL:0000766,2.68e-22,72;CL:0000163,2.19e-18,9;CL:0000473,4.32e-17,48;CL:0000234,4.32e-17,48;CL:0000860,1.18e-16,42;CL:0002057,1.18e-16,42;CL:0000148,1.32e-15,10;CL:0000541,1.32e-15,10;CL:0000763,8.47e-14,108;CL:0000049,8.47e-14,108;CL:0002194,3.18e-13,59;CL:0000576,3.18e-13,59;CL:0000040,3.18e-13,59;CL:0000559,3.18e-13,59;CL:0002009,1.00e-12,61;CL:0002031,4.32e-12,120;CL:0000147,4.20e-11,14;CL:0000738,2.79e-10,136;CL:0002573,4.20e-10,2;CL:0002032,3.56e-08,161;CL:0000837,3.56e-08,161;CL:0000151,3.83e-08,36;CL:0002566,7.97e-08,1;CL:0000710,1.03e-07,20;CL:0000037,1.07e-07,168;CL:0000988,3.85e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.89e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;4.50e-08;1!DOID:4549;4.50e-08;1!DOID:5861;4.50e-08;1!DOID:6496;4.50e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.07e-08,1;DOID:4549,4.07e-08,1;DOID:5861,4.07e-08,1;DOID:6496,4.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.54e-14!80;UBERON:0001474!7.48e-14!86;UBERON:0002193!3.50e-12!112;UBERON:0002405!7.60e-12!115;UBERON:0002390!8.80e-12!102;UBERON:0003061!8.80e-12!102;UBERON:0004765!3.55e-10!101;UBERON:0001434!3.55e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,8.71e-22,82;UBERON:0002405,4.60e-21,93;UBERON:0002371,5.82e-21,76;UBERON:0004765,1.50e-19,90;UBERON:0002193,1.23e-17,108;UBERON:0001434,2.97e-17,100;UBERON:0002390,1.54e-15,98;UBERON:0003061,1.54e-15,98;UBERON:0002204,6.30e-09,167 | |||
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|short_description=p18@IFI16 | |||
}} |
Revision as of 01:05, 12 September 2013
Short description: | p18@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_IFI16_5end |
Coexpression cluster: | C1841_melanoma_Mast_schwannoma_CD14_extraskeletal_Macrophage_giant |
Association with transcript: | 73bp_to_ENST00000474473_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.47e-33 | 5 |
basophil mast progenitor cell | 3.47e-33 | 5 |
myeloid lineage restricted progenitor cell | 1.33e-24 | 66 |
granulocyte monocyte progenitor cell | 3.43e-24 | 67 |
myeloid leukocyte | 2.68e-22 | 72 |
endocrine cell | 2.19e-18 | 9 |
defensive cell | 4.32e-17 | 48 |
phagocyte | 4.32e-17 | 48 |
classical monocyte | 1.18e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-16 | 42 |
melanocyte | 1.32e-15 | 10 |
melanoblast | 1.32e-15 | 10 |
myeloid cell | 8.47e-14 | 108 |
common myeloid progenitor | 8.47e-14 | 108 |
monopoietic cell | 3.18e-13 | 59 |
monocyte | 3.18e-13 | 59 |
monoblast | 3.18e-13 | 59 |
promonocyte | 3.18e-13 | 59 |
macrophage dendritic cell progenitor | 1.00e-12 | 61 |
hematopoietic lineage restricted progenitor cell | 4.32e-12 | 120 |
pigment cell | 4.20e-11 | 14 |
leukocyte | 2.79e-10 | 136 |
Schwann cell | 4.20e-10 | 2 |
hematopoietic oligopotent progenitor cell | 3.56e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.56e-08 | 161 |
secretory cell | 3.83e-08 | 36 |
dark melanocyte | 7.97e-08 | 1 |
neurecto-epithelial cell | 1.03e-07 | 20 |
hematopoietic stem cell | 1.07e-07 | 168 |
hematopoietic cell | 3.85e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone element | 8.71e-22 | 82 |
immune system | 4.60e-21 | 93 |
bone marrow | 5.82e-21 | 76 |
skeletal element | 1.50e-19 | 90 |
hemolymphoid system | 1.23e-17 | 108 |
skeletal system | 2.97e-17 | 100 |
hematopoietic system | 1.54e-15 | 98 |
blood island | 1.54e-15 | 98 |
musculoskeletal system | 6.30e-09 | 167 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.07e-08 | 1 |
extraosseous chondrosarcoma | 4.07e-08 | 1 |
myxoid chondrosarcoma | 4.07e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 4.07e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.