FFCP PHASE1:Hg19::chr1:212965197..212965274,+: Difference between revisions
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{{FFCP | 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6053145621,16.0441532174528,22.0568815269692,29.1806641331726,9.10913758251359,30.1263181188775,29.652382371177,17.025966576084,20.0693218491525,12.6459118752012,21.9821266412497,17.5702766369013,11.9981191643622,10.4637891103737,9.99128667407386,10.5869618864177,12.1767075509789,11.1589192030335,13.5821870627055,14.2565119006807,12.7605348145601,14.0158223903566,12.5783950876288,12.4573571023515,9.61128287267079,10.132471892137,11.5023528431258,7.54061264947133,5.25679331640218,7.64665290678128,7.45262193006045,6.22059311761283,12.4945605842258,6.26094074174081,10.9688054567969,6.09288339470073,10.1717683301165,7.45579502730494,5.26311729508193,9.74470895744837,4.77715066438339,6.80047199927361,10.6452668606666,8.7554867079139,5.04739592914604,5.00811559058989,3.43106546199881,7.56883446699114,9.29494294600317,9.95546639592486,6.85262772618109,5.90993175568908,5.24962460173653,8.11350983441216,7.59763327567289,3.08662461233464,7.09558250742905,14.605766559513,9.32661922674236,4.86175929883811,15.899720157449,22.7986561342084,13.1536191910229,20.4456742819805,15.3976628957814,9.09359762388761,5.28280308396568,9.3994076051817,34.3547369615134,43.2259598948647,10.7828031177699,9.20529751259204,14.6873483105417,11.8194679406265,26.9857123450705,16.281546520899,15.254796360022,12.5591083920816,15.1061951659082,30.185638654439,12.6414479544182,6.70373901567893,5.40607396110812,18.5325100752945,63.2450891145521,10.5802783107205,11.3310826620684,26.141294614259,34.0071783181404,14.5266811742008,19.8962873313532,19.1574489128506,16.1136398241628,25.1902007185688,12.8492478233239,4.12220417704308,11.0891539946876,6.9702867438238,11.0904639504325,9.53455238667918,2.0710797781803,8.35448132888354,8.64918776016458,10.2869585038795,7.03362610109783,8.38101422340552,6.71464861791397,5.76638736246476,27.555334524305,31.2431239445539,21.0820532431208,25.4297398877566,31.7245389230567,6.57909320228619,17.8636024220146,11.7833733720946,6.38812138197976,24.1065826145229,22.86729311088,23.6716585652286,15.0257046291856,6.38657065171,15.7870562951418,6.17356833974707,28.6152575832462,20.1264687102318,18.556433018783,7.34127252487656,9.18369186351014,31.8944647529484,2.80272163313789,10.0447459256045,10.7963795609311,4.7775168788705,16.010745895571,21.4898511956508,6.39327839524689,7.99748052591865,5.61197955311177,12.2257536856192,10.7552640569188,12.4426739126537,12.4765934057881,14.7915000913207,13.4637179519469,8.89112805400951,4.35303050233695,4.03268301363616,9.55538938977433,12.1922420659594,11.9743285010596,5.24247077423759,20.7177227900126,15.2967582215808,5.799072156691,9.71421986118279,8.1878812211737,18.7013728651686,10.9406483515363,20.1044026029349,22.0980438658313,13.2847302338673,6.40545512295941,4.37119121007915,15.9907880762918,14.4637509834804,14.1405928260976,17.86407050746,17.8227840196252,13.5249832826688,7.13693881688831,10.8081505676832,8.95964642832723,21.3874073679348,7.49926542143762,6.35210769088245,8.26486076898433,9.49437304720472,8.71585638468627,16.7707312287198,11.6750956022957,15.2980852929558,21.8175345170189,6.87734892670021,10.415860508669,15.2517957448368,19.0355687334467,8.57931688878537,14.4230554992078,10.2625785819264,12.5446260582638,15.4986095054025,18.378979906969,17.8002352897586,11.9730343184818,15.2739554189022,26.5334220626809,16.1355473544557,9.38229520364316,10.7128994158683,12.1427150491691,16.2635751455148,7.84923038064294,10.3744867993409,10.7122110147856,10.6681206469511,17.1116650542641,9.96810384615895,10.0411087549747,11.6431124791105,4.31437323638165,10.6727345877715,5.7921684686082,8.44356899801917,9.38563769613817,11.7351786415552,8.95171592294625,3.99454064511308,10.2649634731423,14.4255821536455|short_description=p1@TATDN3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=128387 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27010 | |||
|TSSclassifier=S | |||
|UniProt=Q17R31,E9PNH3,E9PP81,E9PJE5,E9PQP8 | |||
|association_with_transcript=0bp_to_ENST00000366973,ENST00000488246,ENST00000525574,ENST00000526641,ENST00000526997,ENST00000531963,ENST00000532433,ENST00000533650_5end | |||
|description=CAGE_peak_1_at_TATDN3_5end | |||
|id=chr1:212965197..212965274,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.69e-15!119;CL:0000738!1.71e-15!140;CL:0000037!2.62e-15!172;CL:0000566!2.62e-15!172;CL:0002031!4.26e-14!124;CL:0002032!4.60e-14!165;CL:0000837!4.60e-14!165;CL:0000988!4.75e-13!182;CL:0000945!1.60e-09!24;CL:0000826!1.60e-09!24;CL:0000542!1.72e-09!53;CL:0000051!1.72e-09!53;CL:0000838!5.15e-09!52;CL:0002194!4.47e-07!63;CL:0000576!4.47e-07!63;CL:0000040!4.47e-07!63;CL:0000559!4.47e-07!63;CL:0000839!5.54e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.22e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.03e-15,115;CL:0000738,1.20e-15,136;CL:0000037,2.15e-15,168;CL:0002031,2.88e-14,120;CL:0002032,3.81e-14,161;CL:0000837,3.81e-14,161;CL:0000988,1.70e-13,177;CL:0000945,1.60e-09,24;CL:0000826,1.60e-09,24;CL:0000542,1.72e-09,53;CL:0000051,1.72e-09,53;CL:0000838,5.15e-09,52;CL:0002194,2.98e-07,59;CL:0000576,2.98e-07,59;CL:0000040,2.98e-07,59;CL:0000559,2.98e-07,59;CL:0000839,3.99e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@TATDN3 | |||
}} |
Revision as of 03:32, 12 September 2013
Short description: | p1@TATDN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TATDN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000366973, ENST00000488246, ENST00000525574, ENST00000526641, ENST00000526997, ENST00000531963, ENST00000532433, ENST00000533650_5end |
EntrezGene: | TATDN3 |
HGNC: | 27010 |
UniProt: | Q17R31E9PNH3E9PP81E9PJE5E9PQP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.03e-15 | 115 |
leukocyte | 1.20e-15 | 136 |
hematopoietic stem cell | 2.15e-15 | 168 |
hematopoietic lineage restricted progenitor cell | 2.88e-14 | 120 |
hematopoietic oligopotent progenitor cell | 3.81e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.81e-14 | 161 |
hematopoietic cell | 1.70e-13 | 177 |
lymphocyte of B lineage | 1.60e-09 | 24 |
pro-B cell | 1.60e-09 | 24 |
lymphocyte | 1.72e-09 | 53 |
common lymphoid progenitor | 1.72e-09 | 53 |
lymphoid lineage restricted progenitor cell | 5.15e-09 | 52 |
monopoietic cell | 2.98e-07 | 59 |
monocyte | 2.98e-07 | 59 |
monoblast | 2.98e-07 | 59 |
promonocyte | 2.98e-07 | 59 |
myeloid lineage restricted progenitor cell | 3.99e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.30e-16 | 89 |
central nervous system | 1.75e-16 | 81 |
neural tube | 3.44e-16 | 56 |
neural rod | 3.44e-16 | 56 |
future spinal cord | 3.44e-16 | 56 |
neural keel | 3.44e-16 | 56 |
adult organism | 1.65e-15 | 114 |
regional part of nervous system | 1.98e-15 | 53 |
regional part of brain | 1.98e-15 | 53 |
regional part of forebrain | 3.66e-15 | 41 |
forebrain | 3.66e-15 | 41 |
anterior neural tube | 3.66e-15 | 41 |
future forebrain | 3.66e-15 | 41 |
brain | 6.36e-14 | 68 |
future brain | 6.36e-14 | 68 |
telencephalon | 2.87e-12 | 34 |
brain grey matter | 5.66e-12 | 34 |
gray matter | 5.66e-12 | 34 |
cerebral hemisphere | 1.68e-11 | 32 |
regional part of telencephalon | 3.03e-11 | 32 |
regional part of cerebral cortex | 9.77e-10 | 22 |
neocortex | 2.16e-09 | 20 |
neurectoderm | 2.29e-09 | 86 |
neural plate | 1.03e-08 | 82 |
presumptive neural plate | 1.03e-08 | 82 |
hematopoietic system | 4.19e-08 | 98 |
blood island | 4.19e-08 | 98 |
cerebral cortex | 4.55e-08 | 25 |
pallium | 4.55e-08 | 25 |
pre-chordal neural plate | 6.44e-08 | 61 |
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