FFCP PHASE1:Hg19::chr1:44445358..44445362,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8704|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=925|TSSclassifier=S|UniProt=O60909|association_with_transcript=-186bp_to_ENST00000356836_5end|coexpression_cluster_id=C0|description=CAGE_peak_7_at_B4GALT2_5end|id=chr1:44445358..44445362,+|ontology_enrichment_celltype=CL:0002057!2.53e-40!42;CL:0000860!1.49e-36!45;CL:0000557!4.94e-32!71;CL:0000839!1.12e-30!70;CL:0002009!3.64e-30!65;CL:0002194!3.94e-28!63;CL:0000576!3.94e-28!63;CL:0000040!3.94e-28!63;CL:0000559!3.94e-28!63;CL:0000766!4.37e-27!76;CL:0000763!1.96e-18!112;CL:0000049!1.96e-18!112;CL:0002031!4.17e-13!124;CL:0000738!6.25e-12!140;CL:0000063!2.93e-09!578;CL:0002087!2.97e-09!119;CL:0002032!3.22e-08!165;CL:0000837!3.22e-08!165;CL:0000012!5.17e-08!682;CL:0000548!7.91e-08!679;CL:0000004!7.91e-08!679;CL:0000255!7.91e-08!679;CL:0000003!7.93e-08!722;CL:0002371!1.60e-07!591;CL:0000988!2.07e-07!182;CL:0000037!2.74e-07!172;CL:0000566!2.74e-07!172;CL:0000144!8.52e-07!625|ontology_enrichment_celltype_v019=CL:0000860;1.57e-88;33!CL:0002057;1.57e-88;33!CL:0000473;1.18e-70;39!CL:0000234;1.18e-70;39!CL:0000576;5.56e-43;48!CL:0000766;1.35e-28;69!CL:0000763;5.01e-13;100!CL:0002087;5.08e-10;104!CL:0000738;1.73e-08;136!CL:0001014;2.80e-08;2!CL:0001016;2.80e-08;2!CL:0000219;1.95e-07;193|ontology_enrichment_celltype_v019_2=CL:0000473,5.62e-82,48;CL:0000234,5.62e-82,48;CL:0000860,9.01e-79,42;CL:0002057,9.01e-79,42;CL:0002009,1.47e-69,61;CL:0002194,7.44e-64,59;CL:0000576,7.44e-64,59;CL:0000040,7.44e-64,59;CL:0000559,7.44e-64,59;CL:0000557,1.25e-62,67;CL:0000839,2.78e-56,66;CL:0000766,3.86e-54,72;CL:0000763,6.46e-38,108;CL:0000049,6.46e-38,108;CL:0002031,2.87e-31,120;CL:0002087,6.98e-29,115;CL:0000738,2.63e-28,136;CL:0002032,1.53e-22,161;CL:0000837,1.53e-22,161;CL:0000037,3.09e-21,168;CL:0000988,5.04e-21,177;CL:0000134,1.19e-12,354;CL:0002320,3.33e-12,361;CL:0000219,1.26e-10,386;CL:0000723,8.62e-10,433;CL:0000034,2.03e-09,441;CL:0000048,2.21e-09,427;CL:0001014,2.51e-08,2;CL:0001016,2.51e-08,2|ontology_enrichment_development_v019=CL:0002057;3.27e-55;42!CL:0000049;8.02e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.93e-29!80;UBERON:0004765!7.79e-28!101;UBERON:0001434!7.79e-28!101;UBERON:0001474!5.52e-27!86;UBERON:0002390!6.77e-19!102;UBERON:0003061!6.77e-19!102;UBERON:0002193!2.08e-17!112;UBERON:0002405!2.45e-17!115;UBERON:0002204!2.04e-15!167;UBERON:0003081!7.41e-10!216;UBERON:0001737!2.69e-09!9;UBERON:0000062!8.70e-07!511|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.05e-57,76;UBERON:0004765,1.60e-53,90;UBERON:0001474,7.18e-53,82;UBERON:0001434,2.77e-47,100;UBERON:0002405,1.30e-45,93;UBERON:0002390,7.61e-43,98;UBERON:0003061,7.61e-43,98;UBERON:0002193,4.48e-38,108;UBERON:0002204,3.47e-26,167;UBERON:0003081,3.97e-21,203;UBERON:0000926,7.09e-12,315;UBERON:0004120,7.09e-12,315;UBERON:0006603,7.09e-12,315;UBERON:0002384,1.36e-11,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39334510984468,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,2.4717700592526,3.77875943688809,5.09426528494414,1.62700325833979,2.87817521615278,6.81354015969228,2.8769239232215,3.33008918487831,8.0403958162119,2.41321976515633,1.93645405075148,13.5426486594342,3.76484679085209,5.45812300115692,5.8428105955722,6.12167784741805,4.17207735198922,3.19668562899521,0.989553900560148,2.19410023383795,5.96714650745772,5.22376629531451,4.53908179752912,9.34233373493363,4.27122730936464,3.65038042894141,5.86409880703815,2.42159801053347,2.57794345191295,7.59509729858123,0.211255286311942,0.850417199860174,0.419317291016752,0.673971786878971,1.20141514273205,0.803627933485401,0,1.59133341759272,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0.589211814949674,0.443067789167242,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,1.40648818027883,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0.741568885568859,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0,0.213557388818567,0,0,0,0,0,0,0,0.252433774244115,0,0.80823028409406,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0.504641701751257,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.964044119533928,0.55146986366197,1.08939722046203,0.474541238222193,0.674156540800822,0.392442930250692,1.15424147083917,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,1.1240175325762,0.100528972411631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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8704 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=925 | |||
|TSSclassifier=S | |||
|UniProt=O60909 | |||
|association_with_transcript=-186bp_to_ENST00000356836_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_7_at_B4GALT2_5end | |||
|id=chr1:44445358..44445362,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.53e-40!42;CL:0000860!1.49e-36!45;CL:0000557!4.94e-32!71;CL:0000839!1.12e-30!70;CL:0002009!3.64e-30!65;CL:0002194!3.94e-28!63;CL:0000576!3.94e-28!63;CL:0000040!3.94e-28!63;CL:0000559!3.94e-28!63;CL:0000766!4.37e-27!76;CL:0000763!1.96e-18!112;CL:0000049!1.96e-18!112;CL:0002031!4.17e-13!124;CL:0000738!6.25e-12!140;CL:0000063!2.93e-09!578;CL:0002087!2.97e-09!119;CL:0002032!3.22e-08!165;CL:0000837!3.22e-08!165;CL:0000012!5.17e-08!682;CL:0000548!7.91e-08!679;CL:0000004!7.91e-08!679;CL:0000255!7.91e-08!679;CL:0000003!7.93e-08!722;CL:0002371!1.60e-07!591;CL:0000988!2.07e-07!182;CL:0000037!2.74e-07!172;CL:0000566!2.74e-07!172;CL:0000144!8.52e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-88;33!CL:0002057;1.57e-88;33!CL:0000473;1.18e-70;39!CL:0000234;1.18e-70;39!CL:0000576;5.56e-43;48!CL:0000766;1.35e-28;69!CL:0000763;5.01e-13;100!CL:0002087;5.08e-10;104!CL:0000738;1.73e-08;136!CL:0001014;2.80e-08;2!CL:0001016;2.80e-08;2!CL:0000219;1.95e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.62e-82,48;CL:0000234,5.62e-82,48;CL:0000860,9.01e-79,42;CL:0002057,9.01e-79,42;CL:0002009,1.47e-69,61;CL:0002194,7.44e-64,59;CL:0000576,7.44e-64,59;CL:0000040,7.44e-64,59;CL:0000559,7.44e-64,59;CL:0000557,1.25e-62,67;CL:0000839,2.78e-56,66;CL:0000766,3.86e-54,72;CL:0000763,6.46e-38,108;CL:0000049,6.46e-38,108;CL:0002031,2.87e-31,120;CL:0002087,6.98e-29,115;CL:0000738,2.63e-28,136;CL:0002032,1.53e-22,161;CL:0000837,1.53e-22,161;CL:0000037,3.09e-21,168;CL:0000988,5.04e-21,177;CL:0000134,1.19e-12,354;CL:0002320,3.33e-12,361;CL:0000219,1.26e-10,386;CL:0000723,8.62e-10,433;CL:0000034,2.03e-09,441;CL:0000048,2.21e-09,427;CL:0001014,2.51e-08,2;CL:0001016,2.51e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.27e-55;42!CL:0000049;8.02e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.93e-29!80;UBERON:0004765!7.79e-28!101;UBERON:0001434!7.79e-28!101;UBERON:0001474!5.52e-27!86;UBERON:0002390!6.77e-19!102;UBERON:0003061!6.77e-19!102;UBERON:0002193!2.08e-17!112;UBERON:0002405!2.45e-17!115;UBERON:0002204!2.04e-15!167;UBERON:0003081!7.41e-10!216;UBERON:0001737!2.69e-09!9;UBERON:0000062!8.70e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.05e-57,76;UBERON:0004765,1.60e-53,90;UBERON:0001474,7.18e-53,82;UBERON:0001434,2.77e-47,100;UBERON:0002405,1.30e-45,93;UBERON:0002390,7.61e-43,98;UBERON:0003061,7.61e-43,98;UBERON:0002193,4.48e-38,108;UBERON:0002204,3.47e-26,167;UBERON:0003081,3.97e-21,203;UBERON:0000926,7.09e-12,315;UBERON:0004120,7.09e-12,315;UBERON:0006603,7.09e-12,315;UBERON:0002384,1.36e-11,371 | |||
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|short_description=p7@B4GALT2 | |||
}} |
Revision as of 05:51, 12 September 2013
Short description: | p7@B4GALT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_B4GALT2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -186bp_to_ENST00000356836_5end |
EntrezGene: | B4GALT2 |
HGNC: | 925 |
UniProt: | O60909 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.62e-82 | 48 |
phagocyte | 5.62e-82 | 48 |
classical monocyte | 9.01e-79 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.01e-79 | 42 |
macrophage dendritic cell progenitor | 1.47e-69 | 61 |
monopoietic cell | 7.44e-64 | 59 |
monocyte | 7.44e-64 | 59 |
monoblast | 7.44e-64 | 59 |
promonocyte | 7.44e-64 | 59 |
granulocyte monocyte progenitor cell | 1.25e-62 | 67 |
myeloid lineage restricted progenitor cell | 2.78e-56 | 66 |
myeloid leukocyte | 3.86e-54 | 72 |
myeloid cell | 6.46e-38 | 108 |
common myeloid progenitor | 6.46e-38 | 108 |
hematopoietic lineage restricted progenitor cell | 2.87e-31 | 120 |
nongranular leukocyte | 6.98e-29 | 115 |
leukocyte | 2.63e-28 | 136 |
hematopoietic oligopotent progenitor cell | 1.53e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-22 | 161 |
hematopoietic stem cell | 3.09e-21 | 168 |
hematopoietic cell | 5.04e-21 | 177 |
mesenchymal cell | 1.19e-12 | 354 |
connective tissue cell | 3.33e-12 | 361 |
motile cell | 1.26e-10 | 386 |
somatic stem cell | 8.62e-10 | 433 |
stem cell | 2.03e-09 | 441 |
multi fate stem cell | 2.21e-09 | 427 |
CD1a-positive Langerhans cell | 2.51e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.51e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.05e-57 | 76 |
skeletal element | 1.60e-53 | 90 |
bone element | 7.18e-53 | 82 |
skeletal system | 2.77e-47 | 100 |
immune system | 1.30e-45 | 93 |
hematopoietic system | 7.61e-43 | 98 |
blood island | 7.61e-43 | 98 |
hemolymphoid system | 4.48e-38 | 108 |
musculoskeletal system | 3.47e-26 | 167 |
lateral plate mesoderm | 3.97e-21 | 203 |
mesoderm | 7.09e-12 | 315 |
mesoderm-derived structure | 7.09e-12 | 315 |
presumptive mesoderm | 7.09e-12 | 315 |
connective tissue | 1.36e-11 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.