FFCP PHASE1:Hg19::chr22:31503460..31503464,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-8bp_to_ENST00000469262_5end|coexpression_cluster_id=C589|description=CAGE_peak_2_at_ENST00000469262_5end|id=chr22:31503460..31503464,-|ontology_enrichment_celltype=CL:0000055!6.27e-28!180;CL:0000192!4.79e-21!42;CL:0000514!4.79e-21!42;CL:0000680!8.85e-20!57;CL:0000056!8.85e-20!57;CL:0000355!8.85e-20!57;CL:0000183!2.08e-19!59;CL:0000187!9.39e-19!54;CL:0000393!5.28e-17!60;CL:0000211!5.28e-17!60;CL:0000359!3.29e-16!32;CL:0000222!9.36e-12!119;CL:0000057!1.42e-10!75|ontology_enrichment_celltype_v019=CL:0000359;1.11e-24;32!CL:0000192;2.18e-20;43!CL:0000187;2.71e-10;55!CL:0002539;8.30e-09;10!CL:0000393;2.12e-08;61!CL:0000211;2.12e-08;61!CL:0002595;3.00e-08;5|ontology_enrichment_celltype_v019_2=CL:0000192,2.40e-27,43;CL:0000514,2.40e-27,43;CL:0000359,6.05e-27,32;CL:0000680,5.39e-22,58;CL:0000056,5.39e-22,58;CL:0000355,5.39e-22,58;CL:0000187,1.05e-21,55;CL:0000393,7.37e-19,61;CL:0000211,7.37e-19,61;CL:0000222,4.38e-12,121;CL:0002539,8.77e-09,10;CL:0002595,1.41e-08,5;CL:0000048,8.65e-08,427;CL:0000723,1.77e-07,433;CL:0000034,4.46e-07,441|ontology_enrichment_development_v019=CL:0000514;2.18e-20;43!CL:0000355;2.97e-10;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!5.59e-22!83;UBERON:0002329!5.59e-22!83;UBERON:0003077!5.59e-22!83;UBERON:0003059!5.59e-22!83;UBERON:0007282!5.59e-22!83;UBERON:0009618!5.59e-22!83;UBERON:0007285!5.59e-22!83;UBERON:0004290!3.73e-19!70;UBERON:0000486!2.11e-17!82;UBERON:0001134!4.54e-17!61;UBERON:0002036!4.54e-17!61;UBERON:0003082!4.54e-17!61;UBERON:0002385!5.77e-17!63;UBERON:0001015!5.77e-17!63;UBERON:0000383!5.77e-17!63;UBERON:0001637!2.54e-13!42;UBERON:0003509!2.54e-13!42;UBERON:0004572!2.54e-13!42;UBERON:0004872!3.71e-13!84;UBERON:0005256!6.92e-13!143;UBERON:0002049!1.90e-12!79;UBERON:0007798!1.90e-12!79;UBERON:0001981!2.42e-12!60;UBERON:0007500!2.42e-12!60;UBERON:0004537!2.42e-12!60;UBERON:0006965!2.42e-12!60;UBERON:0000055!3.17e-12!69;UBERON:0000475!4.85e-11!365;UBERON:0002100!5.35e-10!216;UBERON:0004573!2.50e-09!33;UBERON:0004571!2.50e-09!33;UBERON:0004535!6.85e-09!110;UBERON:0001009!1.36e-08!113;UBERON:0000490!3.17e-07!138|ontology_enrichment_uberon_v019=UBERON:0004573;4.90e-13;33!UBERON:0004571;4.90e-13;33!UBERON:0001637;1.59e-11;42!UBERON:0003509;1.59e-11;42!UBERON:0004572;1.59e-11;42!UBERON:0007500;1.87e-09;56!UBERON:0001981;1.87e-09;56!UBERON:0004537;1.87e-09;56!UBERON:0004237;8.30e-09;10!UBERON:0004695;8.30e-09;10!UBERON:0002111;8.30e-09;10!UBERON:0004178;8.30e-09;10!UBERON:0003513;1.25e-08;7!UBERON:0003834;3.00e-08;5!UBERON:0001533;3.00e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.33e-20,62;UBERON:0002036,4.33e-20,62;UBERON:0003082,4.33e-20,62;UBERON:0002329,8.02e-20,71;UBERON:0003059,8.02e-20,71;UBERON:0007282,8.02e-20,71;UBERON:0004290,8.02e-20,71;UBERON:0009618,8.02e-20,71;UBERON:0003077,1.95e-19,72;UBERON:0007285,1.95e-19,72;UBERON:0002385,3.14e-19,64;UBERON:0001015,3.14e-19,64;UBERON:0000383,3.14e-19,64;UBERON:0001637,3.96e-19,42;UBERON:0003509,3.96e-19,42;UBERON:0004572,3.96e-19,42;UBERON:0007524,4.64e-19,73;UBERON:0007503,2.50e-17,78;UBERON:0000486,4.06e-17,83;UBERON:0007500,2.12e-16,59;UBERON:0001981,2.12e-16,59;UBERON:0004537,2.12e-16,59;UBERON:0006965,2.12e-16,59;UBERON:0000055,3.05e-16,68;UBERON:0004573,7.72e-16,33;UBERON:0004571,7.72e-16,33;UBERON:0004872,1.56e-14,83;UBERON:0002049,2.84e-13,78;UBERON:0007798,2.84e-13,78;UBERON:0005256,6.44e-13,122;UBERON:0000490,1.47e-12,148;UBERON:0003104,1.09e-11,160;UBERON:0009142,1.09e-11,160;UBERON:0004535,2.89e-10,109;UBERON:0003914,7.12e-10,117;UBERON:0001009,8.45e-10,112;UBERON:0003513,5.89e-09,7;UBERON:0004237,8.77e-09,10;UBERON:0004695,8.77e-09,10;UBERON:0002111,8.77e-09,10;UBERON:0004178,8.77e-09,10;UBERON:0003834,1.41e-08,5;UBERON:0001533,1.41e-08,5;UBERON:0002100,1.35e-07,199|phase1_expression=0.908391896352783,1.2846031433459,1.26858963686374,1.0007329835313,0.893922188854576,5.23403114460221,0,0.631719873426831,0,0,0,0.436882744260345,0,0.495065411840187,0.662794751455832,0,1.20538905604795,2.92124036154949,0.487932798790507,0,0.204000691244253,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.616804496998528,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0.144824403882799,0,1.34140171940727,0.383587685530591,1.0843174571537,1.00267582127178,0.434539556882471,2.3858578411533,0.973269740605272,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0.626984899610432,0.258416759169329,0,0,1.20848795132744,1.5205442114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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_ENST00000469262_5end | |||
|coexpression_cluster_id=C589 | |||
|description=CAGE_peak_2_at_ENST00000469262_5end | |||
|id=chr22:31503460..31503464,- | |||
|ontology_enrichment_celltype=CL:0000055!6.27e-28!180;CL:0000192!4.79e-21!42;CL:0000514!4.79e-21!42;CL:0000680!8.85e-20!57;CL:0000056!8.85e-20!57;CL:0000355!8.85e-20!57;CL:0000183!2.08e-19!59;CL:0000187!9.39e-19!54;CL:0000393!5.28e-17!60;CL:0000211!5.28e-17!60;CL:0000359!3.29e-16!32;CL:0000222!9.36e-12!119;CL:0000057!1.42e-10!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.11e-24;32!CL:0000192;2.18e-20;43!CL:0000187;2.71e-10;55!CL:0002539;8.30e-09;10!CL:0000393;2.12e-08;61!CL:0000211;2.12e-08;61!CL:0002595;3.00e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.40e-27,43;CL:0000514,2.40e-27,43;CL:0000359,6.05e-27,32;CL:0000680,5.39e-22,58;CL:0000056,5.39e-22,58;CL:0000355,5.39e-22,58;CL:0000187,1.05e-21,55;CL:0000393,7.37e-19,61;CL:0000211,7.37e-19,61;CL:0000222,4.38e-12,121;CL:0002539,8.77e-09,10;CL:0002595,1.41e-08,5;CL:0000048,8.65e-08,427;CL:0000723,1.77e-07,433;CL:0000034,4.46e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;2.18e-20;43!CL:0000355;2.97e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;4.90e-13;33!UBERON:0004571;4.90e-13;33!UBERON:0001637;1.59e-11;42!UBERON:0003509;1.59e-11;42!UBERON:0004572;1.59e-11;42!UBERON:0007500;1.87e-09;56!UBERON:0001981;1.87e-09;56!UBERON:0004537;1.87e-09;56!UBERON:0004237;8.30e-09;10!UBERON:0004695;8.30e-09;10!UBERON:0002111;8.30e-09;10!UBERON:0004178;8.30e-09;10!UBERON:0003513;1.25e-08;7!UBERON:0003834;3.00e-08;5!UBERON:0001533;3.00e-08;5 | |||
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| |||
|short_description=p2@ENST00000469262 | |||
}} |
Revision as of 11:31, 12 September 2013
Short description: | p2@ENST00000469262 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000469262_5end |
Coexpression cluster: | C589_Mesenchymal_Smooth_Fibroblast_Osteoblast_tenocyte_Preadipocyte_Synoviocyte |
Association with transcript: | -8bp_to_ENST00000469262_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.40e-27 | 43 |
smooth muscle myoblast | 2.40e-27 | 43 |
vascular associated smooth muscle cell | 6.05e-27 | 32 |
muscle precursor cell | 5.39e-22 | 58 |
myoblast | 5.39e-22 | 58 |
multi-potent skeletal muscle stem cell | 5.39e-22 | 58 |
muscle cell | 1.05e-21 | 55 |
electrically responsive cell | 7.37e-19 | 61 |
electrically active cell | 7.37e-19 | 61 |
mesodermal cell | 4.38e-12 | 121 |
aortic smooth muscle cell | 8.77e-09 | 10 |
smooth muscle cell of the subclavian artery | 1.41e-08 | 5 |
multi fate stem cell | 8.65e-08 | 427 |
somatic stem cell | 1.77e-07 | 433 |
stem cell | 4.46e-07 | 441 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.