FFCP PHASE1:Hg19::chr22:37257072..37257091,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4689|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7662|TSSclassifier=S|UniProt=Q15080,A8K4F9,B0QY04|association_with_transcript=42bp_to_ENST00000248899,ENST00000397147,ENST00000447071,NM_000631,NM_013416,uc003apy.3,uc003apz.3_5end|coexpression_cluster_id=C2643|description=CAGE_peak_2_at_NCF4_5end|id=chr22:37257072..37257091,+|ontology_enrichment_celltype=CL:0000037!4.48e-73!172;CL:0000566!4.48e-73!172;CL:0002032!1.30e-69!165;CL:0000837!1.30e-69!165;CL:0000988!5.41e-69!182;CL:0000763!1.39e-61!112;CL:0000049!1.39e-61!112;CL:0000738!2.16e-55!140;CL:0002031!9.61e-46!124;CL:0000766!2.12e-44!76;CL:0002087!4.89e-43!119;CL:0000557!8.54e-40!71;CL:0000839!2.39e-38!70;CL:0002009!1.69e-36!65;CL:0002194!2.67e-35!63;CL:0000576!2.67e-35!63;CL:0000040!2.67e-35!63;CL:0000559!2.67e-35!63;CL:0002057!4.31e-30!42;CL:0000860!9.43e-27!45;CL:0000134!6.36e-10!358;CL:0000542!5.17e-09!53;CL:0000051!5.17e-09!53;CL:0002320!5.64e-09!365;CL:0000838!9.51e-09!52;CL:0000945!2.42e-08!24;CL:0000826!2.42e-08!24;CL:0000094!8.26e-08!8;CL:0000451!7.32e-07!10|ontology_enrichment_celltype_v019=CL:0000473;1.00e-27;39!CL:0000234;1.00e-27;39!CL:0000860;1.87e-27;33!CL:0002057;1.87e-27;33!CL:0000576;1.74e-26;48!CL:0000766;8.76e-24;69!CL:0000763;1.54e-23;100!CL:0000988;7.01e-14;177!CL:0000738;2.66e-13;136!CL:0002087;8.27e-13;104!CL:0000094;4.43e-09;8!CL:0000945;1.13e-07;24!CL:0000235;3.33e-07;6!CL:0000081;4.56e-07;11!CL:0000451;8.26e-07;10|ontology_enrichment_celltype_v019_2=CL:0000037,7.07e-79,168;CL:0000763,1.64e-77,108;CL:0000049,1.64e-77,108;CL:0000988,6.65e-76,177;CL:0002032,1.16e-74,161;CL:0000837,1.16e-74,161;CL:0000766,7.23e-59,72;CL:0000738,1.58e-58,136;CL:0000557,3.83e-53,67;CL:0000839,5.52e-50,66;CL:0002009,3.47e-49,61;CL:0002194,9.79e-48,59;CL:0000576,9.79e-48,59;CL:0000040,9.79e-48,59;CL:0000559,9.79e-48,59;CL:0002031,3.94e-47,120;CL:0002087,6.02e-45,115;CL:0000473,6.45e-42,48;CL:0000234,6.45e-42,48;CL:0000860,5.19e-36,42;CL:0002057,5.19e-36,42;CL:0000134,1.29e-14,354;CL:0002320,1.32e-13,361;CL:0000219,3.61e-10,386;CL:0000094,4.21e-09,8;CL:0000945,8.61e-08,24;CL:0000826,8.61e-08,24;CL:0002393,2.63e-07,9;CL:0002397,2.63e-07,9;CL:0000235,3.18e-07,6;CL:0000081,4.26e-07,11;CL:0000451,6.91e-07,10|ontology_enrichment_development_v019=CL:0002057;5.48e-26;42!CL:0000049;1.45e-21;108|ontology_enrichment_disease=DOID:1240!1.18e-14!39;DOID:8692!1.26e-14!31;DOID:2531!1.53e-14!51;DOID:0060083!1.53e-14!51|ontology_enrichment_disease_v019=DOID:8692;3.34e-17;31!DOID:1240;4.16e-14;39!DOID:2531;2.49e-10;51!DOID:0060083;2.49e-10;51|ontology_enrichment_disease_v019_2=DOID:1240,2.48e-18,39;DOID:8692,5.33e-18,31;DOID:2531,2.59e-16,51;DOID:0060083,2.59e-16,51|ontology_enrichment_uberon=UBERON:0002390!1.24e-47!102;UBERON:0003061!1.24e-47!102;UBERON:0002193!1.91e-42!112;UBERON:0002371!9.67e-35!80;UBERON:0001474!3.05e-30!86;UBERON:0007023!4.48e-26!115;UBERON:0002405!1.14e-25!115;UBERON:0004765!3.71e-22!101;UBERON:0001434!3.71e-22!101;UBERON:0003081!7.16e-11!216;UBERON:0000178!7.86e-11!15;UBERON:0000179!7.86e-11!15;UBERON:0000463!7.86e-11!15;UBERON:0002384!4.63e-08!375;UBERON:0002204!3.81e-07!167|ontology_enrichment_uberon_v019=UBERON:0000178;7.50e-13;15!UBERON:0000179;7.50e-13;15!UBERON:0000463;7.50e-13;15!UBERON:0002390;1.04e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-60,98;UBERON:0003061,1.05e-60,98;UBERON:0002193,5.71e-55,108;UBERON:0002371,4.23e-47,76;UBERON:0002405,8.82e-43,93;UBERON:0001474,1.03e-41,82;UBERON:0004765,1.10e-35,90;UBERON:0001434,1.41e-29,100;UBERON:0003081,8.79e-20,203;UBERON:0000178,9.63e-13,15;UBERON:0000179,9.63e-13,15;UBERON:0000463,9.63e-13,15;UBERON:0002384,1.11e-12,371;UBERON:0002204,3.44e-11,167;UBERON:0007023,1.28e-09,114;UBERON:0000926,5.78e-07,315;UBERON:0004120,5.78e-07,315;UBERON:0006603,5.78e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.32243550125005,8.04585776609468,7.47752422479953,14.9478425202584,4.98978217526377,6.19264493264304,0,0,0,1.85921281392724,0.142169232487422,10.2760153767197,9.41792194504192,11.0299446108578,8.89744569934992,55.0832066630214,43.4017512465433,50.7423868239348,18.3201780862252,11.3362783106643,15.5253799160202,15.1078873988695,11.1015329765893,11.1494293522237,43.4415512406447,34.8378560879577,36.1817811729535,7.23965929546899,10.973239620925,5.41705946377367,17.8830222565474,14.191119803008,11.6856211911444,14.3859429414324,11.8743740018155,11.5080682643827,81.4732711461189,53.2567965849757,53.2780938165868,11.6083695451434,8.5107783703671,7.4738669879469,30.1498398308092,30.7674921867919,30.8408159481266,13.3187890579341,9.94349617166425,9.17740923578565,9.50648788403738,5.95292039902122,6.70907665626803,19.9944963440761,15.4682199626751,10.9293398954014,3.99017841237748,3.18266683518544,2.37463399894024,0,3.27683166757279,1.77901850772711,3.41384178053206,1.60158394814405,3.4485146397269,5.2883589822789,4.77026877267682,1.1384259382189,2.34894875748376,0.382273228125229,11.89541957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.0580536810308,0,0,0,0,0,0,0,0,0,0,1.89446745545599,1.07185652062471,0.829169439458779,1.96522692137601,5.33084954752452,0.714193294391221,1.35636710655613,1.67601728598816,0,0.445530107947154,1.0105859447911,0.870866991587845,2.05339980651169,3.90641907484608,2.65372159952903,0.332660356546013,0,0,0,0,0,0.733448665097199,1.22068853494722,1.33151354837103,4.42802345900258,2.56454793842586|short_description=p2@NCF4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4689 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7662 | |||
|TSSclassifier=S | |||
|UniProt=Q15080,A8K4F9,B0QY04 | |||
|association_with_transcript=42bp_to_ENST00000248899,ENST00000397147,ENST00000447071,NM_000631,NM_013416,uc003apy.3,uc003apz.3_5end | |||
|coexpression_cluster_id=C2643 | |||
|description=CAGE_peak_2_at_NCF4_5end | |||
|id=chr22:37257072..37257091,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.48e-73!172;CL:0000566!4.48e-73!172;CL:0002032!1.30e-69!165;CL:0000837!1.30e-69!165;CL:0000988!5.41e-69!182;CL:0000763!1.39e-61!112;CL:0000049!1.39e-61!112;CL:0000738!2.16e-55!140;CL:0002031!9.61e-46!124;CL:0000766!2.12e-44!76;CL:0002087!4.89e-43!119;CL:0000557!8.54e-40!71;CL:0000839!2.39e-38!70;CL:0002009!1.69e-36!65;CL:0002194!2.67e-35!63;CL:0000576!2.67e-35!63;CL:0000040!2.67e-35!63;CL:0000559!2.67e-35!63;CL:0002057!4.31e-30!42;CL:0000860!9.43e-27!45;CL:0000134!6.36e-10!358;CL:0000542!5.17e-09!53;CL:0000051!5.17e-09!53;CL:0002320!5.64e-09!365;CL:0000838!9.51e-09!52;CL:0000945!2.42e-08!24;CL:0000826!2.42e-08!24;CL:0000094!8.26e-08!8;CL:0000451!7.32e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.00e-27;39!CL:0000234;1.00e-27;39!CL:0000860;1.87e-27;33!CL:0002057;1.87e-27;33!CL:0000576;1.74e-26;48!CL:0000766;8.76e-24;69!CL:0000763;1.54e-23;100!CL:0000988;7.01e-14;177!CL:0000738;2.66e-13;136!CL:0002087;8.27e-13;104!CL:0000094;4.43e-09;8!CL:0000945;1.13e-07;24!CL:0000235;3.33e-07;6!CL:0000081;4.56e-07;11!CL:0000451;8.26e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.07e-79,168;CL:0000763,1.64e-77,108;CL:0000049,1.64e-77,108;CL:0000988,6.65e-76,177;CL:0002032,1.16e-74,161;CL:0000837,1.16e-74,161;CL:0000766,7.23e-59,72;CL:0000738,1.58e-58,136;CL:0000557,3.83e-53,67;CL:0000839,5.52e-50,66;CL:0002009,3.47e-49,61;CL:0002194,9.79e-48,59;CL:0000576,9.79e-48,59;CL:0000040,9.79e-48,59;CL:0000559,9.79e-48,59;CL:0002031,3.94e-47,120;CL:0002087,6.02e-45,115;CL:0000473,6.45e-42,48;CL:0000234,6.45e-42,48;CL:0000860,5.19e-36,42;CL:0002057,5.19e-36,42;CL:0000134,1.29e-14,354;CL:0002320,1.32e-13,361;CL:0000219,3.61e-10,386;CL:0000094,4.21e-09,8;CL:0000945,8.61e-08,24;CL:0000826,8.61e-08,24;CL:0002393,2.63e-07,9;CL:0002397,2.63e-07,9;CL:0000235,3.18e-07,6;CL:0000081,4.26e-07,11;CL:0000451,6.91e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;5.48e-26;42!CL:0000049;1.45e-21;108 | |||
|ontology_enrichment_disease=DOID:1240!1.18e-14!39;DOID:8692!1.26e-14!31;DOID:2531!1.53e-14!51;DOID:0060083!1.53e-14!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.34e-17;31!DOID:1240;4.16e-14;39!DOID:2531;2.49e-10;51!DOID:0060083;2.49e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.48e-18,39;DOID:8692,5.33e-18,31;DOID:2531,2.59e-16,51;DOID:0060083,2.59e-16,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.24e-47!102;UBERON:0003061!1.24e-47!102;UBERON:0002193!1.91e-42!112;UBERON:0002371!9.67e-35!80;UBERON:0001474!3.05e-30!86;UBERON:0007023!4.48e-26!115;UBERON:0002405!1.14e-25!115;UBERON:0004765!3.71e-22!101;UBERON:0001434!3.71e-22!101;UBERON:0003081!7.16e-11!216;UBERON:0000178!7.86e-11!15;UBERON:0000179!7.86e-11!15;UBERON:0000463!7.86e-11!15;UBERON:0002384!4.63e-08!375;UBERON:0002204!3.81e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.50e-13;15!UBERON:0000179;7.50e-13;15!UBERON:0000463;7.50e-13;15!UBERON:0002390;1.04e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-60,98;UBERON:0003061,1.05e-60,98;UBERON:0002193,5.71e-55,108;UBERON:0002371,4.23e-47,76;UBERON:0002405,8.82e-43,93;UBERON:0001474,1.03e-41,82;UBERON:0004765,1.10e-35,90;UBERON:0001434,1.41e-29,100;UBERON:0003081,8.79e-20,203;UBERON:0000178,9.63e-13,15;UBERON:0000179,9.63e-13,15;UBERON:0000463,9.63e-13,15;UBERON:0002384,1.11e-12,371;UBERON:0002204,3.44e-11,167;UBERON:0007023,1.28e-09,114;UBERON:0000926,5.78e-07,315;UBERON:0004120,5.78e-07,315;UBERON:0006603,5.78e-07,315 | |||
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| |||
|short_description=p2@NCF4 | |||
}} |
Revision as of 11:48, 12 September 2013
Short description: | p2@NCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NCF4_5end |
Coexpression cluster: | C2643_Eosinophils_acute_Neutrophils_CD14_Whole_Monocytederived_Macrophage |
Association with transcript: | 42bp_to_ENST00000248899, ENST00000397147, ENST00000447071, NM_000631, NM_013416, uc003apy.3, uc003apz.3_5end |
EntrezGene: | NCF4 |
HGNC: | 7662 |
UniProt: | Q15080A8K4F9B0QY04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.05e-60 | 98 |
blood island | 1.05e-60 | 98 |
hemolymphoid system | 5.71e-55 | 108 |
bone marrow | 4.23e-47 | 76 |
immune system | 8.82e-43 | 93 |
bone element | 1.03e-41 | 82 |
skeletal element | 1.10e-35 | 90 |
skeletal system | 1.41e-29 | 100 |
lateral plate mesoderm | 8.79e-20 | 203 |
blood | 9.63e-13 | 15 |
haemolymphatic fluid | 9.63e-13 | 15 |
organism substance | 9.63e-13 | 15 |
connective tissue | 1.11e-12 | 371 |
musculoskeletal system | 3.44e-11 | 167 |
adult organism | 1.28e-09 | 114 |
mesoderm | 5.78e-07 | 315 |
mesoderm-derived structure | 5.78e-07 | 315 |
presumptive mesoderm | 5.78e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.48e-18 | 39 |
myeloid leukemia | 5.33e-18 | 31 |
hematologic cancer | 2.59e-16 | 51 |
immune system cancer | 2.59e-16 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.