FFCP PHASE1:Hg19::chr2:192543018..192543049,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64859|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26232|TSSclassifier=S|UniProt=|association_with_transcript=88bp_to_ENST00000409510_5end|description=CAGE_peak_4_at_OBFC2A_5end|id=chr2:192543018..192543049,+|ontology_enrichment_celltype=CL:0000766!1.05e-22!76;CL:0002009!6.38e-21!65;CL:0000557!2.24e-20!71;CL:0002194!8.87e-20!63;CL:0000576!8.87e-20!63;CL:0000040!8.87e-20!63;CL:0000559!8.87e-20!63;CL:0002057!2.65e-19!42;CL:0000839!1.74e-18!70;CL:0000860!1.34e-16!45;CL:0000763!2.56e-16!112;CL:0000049!2.56e-16!112;CL:0000738!2.78e-16!140;CL:0002320!1.44e-14!365;CL:0000134!1.46e-14!358;CL:0000048!1.18e-13!430;CL:0002031!4.01e-13!124;CL:0000723!1.45e-12!436;CL:0002032!1.61e-12!165;CL:0000837!1.61e-12!165;CL:0002087!2.62e-12!119;CL:0000037!1.81e-11!172;CL:0000566!1.81e-11!172;CL:0000988!1.81e-11!182;CL:0000219!1.96e-11!390;CL:0000034!3.33e-11!444;CL:0000003!2.86e-09!722;CL:0000548!2.07e-08!679;CL:0000004!2.07e-08!679;CL:0000255!2.07e-08!679;CL:0000012!2.75e-08!682;CL:0000144!4.25e-08!625;CL:0002371!6.19e-08!591;CL:0000063!2.21e-07!578|ontology_enrichment_celltype_v019=CL:0000860;2.33e-27;33!CL:0002057;2.33e-27;33!CL:0000473;5.38e-27;39!CL:0000234;5.38e-27;39!CL:0000576;1.39e-16;48!CL:0000766;4.12e-16;69!CL:0000990;5.86e-08;8!CL:0000763;3.56e-07;100!CL:0000738;7.77e-07;136|ontology_enrichment_celltype_v019_2=CL:0000766,7.77e-37,72;CL:0002009,1.77e-34,61;CL:0000473,2.81e-33,48;CL:0000234,2.81e-33,48;CL:0000557,9.11e-33,67;CL:0002194,1.83e-32,59;CL:0000576,1.83e-32,59;CL:0000040,1.83e-32,59;CL:0000559,1.83e-32,59;CL:0000839,4.44e-30,66;CL:0000860,2.37e-28,42;CL:0002057,2.37e-28,42;CL:0000763,1.36e-24,108;CL:0000049,1.36e-24,108;CL:0000738,2.04e-20,136;CL:0002031,2.43e-15,120;CL:0002087,3.77e-14,115;CL:0000048,5.22e-14,427;CL:0000134,5.36e-14,354;CL:0002032,5.54e-14,161;CL:0000837,5.54e-14,161;CL:0002320,1.64e-13,361;CL:0000723,2.70e-13,433;CL:0000037,3.30e-13,168;CL:0000034,7.30e-13,441;CL:0000988,4.87e-12,177;CL:0000219,3.27e-11,386;CL:0000990,5.38e-08,8|ontology_enrichment_development_v019=CL:0002057;1.16e-21;42!CL:0000049;1.70e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.89e-20!102;UBERON:0003061!7.89e-20!102;UBERON:0002371!1.98e-19!80;UBERON:0001474!4.18e-18!86;UBERON:0002193!1.62e-17!112;UBERON:0004765!4.82e-15!101;UBERON:0001434!4.82e-15!101;UBERON:0002384!2.66e-14!375;UBERON:0002204!1.47e-12!167;UBERON:0002405!1.33e-11!115;UBERON:0003081!6.38e-09!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.51e-31,76;UBERON:0001474,1.24e-28,82;UBERON:0002390,3.11e-28,98;UBERON:0003061,3.11e-28,98;UBERON:0004765,2.52e-25,90;UBERON:0002193,1.18e-23,108;UBERON:0002405,1.12e-22,93;UBERON:0001434,5.24e-22,100;UBERON:0003081,1.40e-17,203;UBERON:0002204,2.55e-17,167;UBERON:0000926,2.21e-13,315;UBERON:0004120,2.21e-13,315;UBERON:0006603,2.21e-13,315;UBERON:0002384,2.42e-13,371|phase1_expression=0.726713517082227,0.428201047781966,0.422863212287913,6.00439790118782,3.5756887554183,3.48935409640147,0,0.631719873426831,0.522371256399677,0.737201809504527,2.79120467188971,0.218441372130172,0.263766978228454,0.247532705920093,0.662794751455832,4.03395087871065,1.20538905604795,3.65155045193687,1.95173119516203,0.123121058076788,1.22400414746552,0,0,0.136874425072884,0,0.0764134057479513,0,0,1.57345710739562,0,1.08371286321253,1.83884244895785,0.90361775633475,1.47901604066715,0.0774672005803016,0.142169232487422,0,1.66198622559563,1.00272223735071,2.38711957787437,0.223915474239924,1.94336199611388,1.03030227053675,2.76256653681173,3.77875943688809,2.91100873425379,4.88100977501938,4.11167888021826,7.74265927237759,6.32923263108731,5.12321413058201,5.67557351732605,8.61864201841546,8.39130088658974,4.06279459783025,2.63539275359647,4.36649840092553,3.37085226667627,8.57034898638527,6.09765151444578,6.39337125799041,4.61791820261403,4.58766412529753,5.54092175692502,4.64334781805734,4.53908179752912,9.34233373493363,9.2962006144995,9.38669253156363,5.42972111762792,5.44859552370032,5.52416453981347,5.69632297393592,0.211255286311942,0.850417199860174,0.419317291016752,0.673971786878971,0.450530678524519,0.48217676009124,1.14005097496499,0,1.0959849225878,1.75996244461323,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,1.1384259382189,0,0.382273228125229,0,1.68152568894461,0,0.393419540227666,1.17903228824749,0.411202997999018,0.167186495390678,0.32592226663359,1.4203434172042,0,0.334231370655521,0.589211814949674,1.10766947291811,0.812411591295047,1.15282187753108,0.650296737799391,1.15106533222573,0.829050053357545,0,0.296573126324121,0.535081656179426,0,0.339928028092699,0,0,0.253019692019503,0,0,0,1.20460095262218,1.91979916731628,0,0.236777252044017,0,0.80642697289893,1.06976078313403,0.579297615531196,0,0,0,1.0843174571537,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.35133914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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26232 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=88bp_to_ENST00000409510_5end | |||
|description=CAGE_peak_4_at_OBFC2A_5end | |||
|id=chr2:192543018..192543049,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.05e-22!76;CL:0002009!6.38e-21!65;CL:0000557!2.24e-20!71;CL:0002194!8.87e-20!63;CL:0000576!8.87e-20!63;CL:0000040!8.87e-20!63;CL:0000559!8.87e-20!63;CL:0002057!2.65e-19!42;CL:0000839!1.74e-18!70;CL:0000860!1.34e-16!45;CL:0000763!2.56e-16!112;CL:0000049!2.56e-16!112;CL:0000738!2.78e-16!140;CL:0002320!1.44e-14!365;CL:0000134!1.46e-14!358;CL:0000048!1.18e-13!430;CL:0002031!4.01e-13!124;CL:0000723!1.45e-12!436;CL:0002032!1.61e-12!165;CL:0000837!1.61e-12!165;CL:0002087!2.62e-12!119;CL:0000037!1.81e-11!172;CL:0000566!1.81e-11!172;CL:0000988!1.81e-11!182;CL:0000219!1.96e-11!390;CL:0000034!3.33e-11!444;CL:0000003!2.86e-09!722;CL:0000548!2.07e-08!679;CL:0000004!2.07e-08!679;CL:0000255!2.07e-08!679;CL:0000012!2.75e-08!682;CL:0000144!4.25e-08!625;CL:0002371!6.19e-08!591;CL:0000063!2.21e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.33e-27;33!CL:0002057;2.33e-27;33!CL:0000473;5.38e-27;39!CL:0000234;5.38e-27;39!CL:0000576;1.39e-16;48!CL:0000766;4.12e-16;69!CL:0000990;5.86e-08;8!CL:0000763;3.56e-07;100!CL:0000738;7.77e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.77e-37,72;CL:0002009,1.77e-34,61;CL:0000473,2.81e-33,48;CL:0000234,2.81e-33,48;CL:0000557,9.11e-33,67;CL:0002194,1.83e-32,59;CL:0000576,1.83e-32,59;CL:0000040,1.83e-32,59;CL:0000559,1.83e-32,59;CL:0000839,4.44e-30,66;CL:0000860,2.37e-28,42;CL:0002057,2.37e-28,42;CL:0000763,1.36e-24,108;CL:0000049,1.36e-24,108;CL:0000738,2.04e-20,136;CL:0002031,2.43e-15,120;CL:0002087,3.77e-14,115;CL:0000048,5.22e-14,427;CL:0000134,5.36e-14,354;CL:0002032,5.54e-14,161;CL:0000837,5.54e-14,161;CL:0002320,1.64e-13,361;CL:0000723,2.70e-13,433;CL:0000037,3.30e-13,168;CL:0000034,7.30e-13,441;CL:0000988,4.87e-12,177;CL:0000219,3.27e-11,386;CL:0000990,5.38e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-21;42!CL:0000049;1.70e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.89e-20!102;UBERON:0003061!7.89e-20!102;UBERON:0002371!1.98e-19!80;UBERON:0001474!4.18e-18!86;UBERON:0002193!1.62e-17!112;UBERON:0004765!4.82e-15!101;UBERON:0001434!4.82e-15!101;UBERON:0002384!2.66e-14!375;UBERON:0002204!1.47e-12!167;UBERON:0002405!1.33e-11!115;UBERON:0003081!6.38e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.51e-31,76;UBERON:0001474,1.24e-28,82;UBERON:0002390,3.11e-28,98;UBERON:0003061,3.11e-28,98;UBERON:0004765,2.52e-25,90;UBERON:0002193,1.18e-23,108;UBERON:0002405,1.12e-22,93;UBERON:0001434,5.24e-22,100;UBERON:0003081,1.40e-17,203;UBERON:0002204,2.55e-17,167;UBERON:0000926,2.21e-13,315;UBERON:0004120,2.21e-13,315;UBERON:0006603,2.21e-13,315;UBERON:0002384,2.42e-13,371 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.422863212287913,6.00439790118782,3.5756887554183,3.48935409640147,0,0.631719873426831,0.522371256399677,0.737201809504527,2.79120467188971,0.218441372130172,0.263766978228454,0.247532705920093,0.662794751455832,4.03395087871065,1.20538905604795,3.65155045193687,1.95173119516203,0.123121058076788,1.22400414746552,0,0,0.136874425072884,0,0.0764134057479513,0,0,1.57345710739562,0,1.08371286321253,1.83884244895785,0.90361775633475,1.47901604066715,0.0774672005803016,0.142169232487422,0,1.66198622559563,1.00272223735071,2.38711957787437,0.223915474239924,1.94336199611388,1.03030227053675,2.76256653681173,3.77875943688809,2.91100873425379,4.88100977501938,4.11167888021826,7.74265927237759,6.32923263108731,5.12321413058201,5.67557351732605,8.61864201841546,8.39130088658974,4.06279459783025,2.63539275359647,4.36649840092553,3.37085226667627,8.57034898638527,6.09765151444578,6.39337125799041,4.61791820261403,4.58766412529753,5.54092175692502,4.64334781805734,4.53908179752912,9.34233373493363,9.2962006144995,9.38669253156363,5.42972111762792,5.44859552370032,5.52416453981347,5.69632297393592,0.211255286311942,0.850417199860174,0.419317291016752,0.673971786878971,0.450530678524519,0.48217676009124,1.14005097496499,0,1.0959849225878,1.75996244461323,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,1.1384259382189,0,0.382273228125229,0,1.68152568894461,0,0.393419540227666,1.17903228824749,0.411202997999018,0.167186495390678,0.32592226663359,1.4203434172042,0,0.334231370655521,0.589211814949674,1.10766947291811,0.812411591295047,1.15282187753108,0.650296737799391,1.15106533222573,0.829050053357545,0,0.296573126324121,0.535081656179426,0,0.339928028092699,0,0,0.253019692019503,0,0,0,1.20460095262218,1.91979916731628,0,0.236777252044017,0,0.80642697289893,1.06976078313403,0.579297615531196,0,0,0,1.0843174571537,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.351339142772504,0,0,0,3.57002133020152,3.83085422058388,2.39324328933957,0.238490624305342,0,0,0.39752481473341,0,1.73570250803797,0.56530794192401,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0.402829317109147,0.760272105718513,0,0.735326160691737,0.81014194788176,0.267899184852239,0.22452937262617,0.563057402416611,0,0,0.732806975721629,18.4492584410489,3.87780264148325,0,0,0,5.56118559415519,2.58152958673932,0.354668382198357,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0.624320153660641,1.1409436430889,0,0.587172493218824,1.13311061057692,1.54495887372473,0.204154171254893,0.122834317311768,0,1.18800285728205,0.494533858557114,0,0.718618141816238,0.168336113954066,0.250237039743928,0.277064115484183,3.5118209670467,0.30648779579902,0.150238058906597,0.226864366320042,5.56107870635472,0.85422955527427,0.847727604638247,5.40163972951924,2.67936576019941,8.50213782150576,0.37223371266318,2.70042131586026,1.75386609290158,7.06814567883521,0.460249493211497,2.26304479546337,0.355009592516614,2.82105875037393,0.339121184620975,0.57978255948989,0,0.573609190778008,0,0,0,0,0,0.36497735907583,0,0,1.38134921352481,0.464367928031979,1.44375896333917,0.236613600079688,0.505754070234305,0.482022059766964,0,0.871517776369625,0.237270619111097,0,0,0,0.738155454624648,0,0,0,0,0.982827216677626,1.18157981336281,0.441463099414651,0.368965315629341,0,0.219500570817251,0,0.201057944823262,0,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,1.23108503043699,3.04205544681009,2.0808362720422,0,0.335964256397719,0.283550194484773,0.179117045405697,0,0,0,0.616339038092582,0.829312462163088,1.72943944100354,1.8936365013957,0.063497894292169,0,0,0,0,0.300343057843917,0.285826432630578,0.784917590417525,0.43596006883328,0.1466765716419,0,0,0,0,1.04007436911366,0,1.41849132023278,0.532844358032199,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,1.50719688529793,0,0.499864955910285,7.29742683847143,1.00451418286425,4.21667878966063,0.239624855491583,1.14861935834114,1.42636905040718,0.434343920002738,0.410952645100767,0.358121926479791,0.784596007954691,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0,2.24702107184155,2.99161459204025,4.55857064779639,0.12269149171914,0,1.08506009479894,0.831883446123229,0.535286966391485,0.473107245101804,0.468565659970853,0,0,0,0,0.368738337083406,0.0868836144680828,0.391602314925481,0.343143423810856,0,1.94142780736755,0.320182673410333,0.303127571446259,0,0,0,1.53461973288062,0.280660094433074,0.256278298511402,1.02341449813341,0.321707842287215,1.48418066444991,0.154209693802656,0.177561725313127,0.328508624055237,0.519254429183621,1.62694529843943,0.241718899183244,0.601519410909855,0,0.229628896329213,0.728364672026868,0.524497659837696,0.902399225814824,0.231046011313244,0,0,0,1.13733384070897,1.36074964221213,0,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.515205058238611,0.27470839445503,0.247528499761764,0,0,0,0,1.54048617114644,1.38153307253517,1.3783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| |||
|short_description=p4@OBFC2A | |||
}} |
Revision as of 15:46, 12 September 2013
Short description: | p4@OBFC2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_OBFC2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 88bp_to_ENST00000409510_5end |
EntrezGene: | OBFC2A |
HGNC: | 26232 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.77e-37 | 72 |
macrophage dendritic cell progenitor | 1.77e-34 | 61 |
defensive cell | 2.81e-33 | 48 |
phagocyte | 2.81e-33 | 48 |
granulocyte monocyte progenitor cell | 9.11e-33 | 67 |
monopoietic cell | 1.83e-32 | 59 |
monocyte | 1.83e-32 | 59 |
monoblast | 1.83e-32 | 59 |
promonocyte | 1.83e-32 | 59 |
myeloid lineage restricted progenitor cell | 4.44e-30 | 66 |
classical monocyte | 2.37e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.37e-28 | 42 |
myeloid cell | 1.36e-24 | 108 |
common myeloid progenitor | 1.36e-24 | 108 |
leukocyte | 2.04e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 2.43e-15 | 120 |
nongranular leukocyte | 3.77e-14 | 115 |
multi fate stem cell | 5.22e-14 | 427 |
mesenchymal cell | 5.36e-14 | 354 |
hematopoietic oligopotent progenitor cell | 5.54e-14 | 161 |
hematopoietic multipotent progenitor cell | 5.54e-14 | 161 |
connective tissue cell | 1.64e-13 | 361 |
somatic stem cell | 2.70e-13 | 433 |
hematopoietic stem cell | 3.30e-13 | 168 |
stem cell | 7.30e-13 | 441 |
hematopoietic cell | 4.87e-12 | 177 |
motile cell | 3.27e-11 | 386 |
conventional dendritic cell | 5.38e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.51e-31 | 76 |
bone element | 1.24e-28 | 82 |
hematopoietic system | 3.11e-28 | 98 |
blood island | 3.11e-28 | 98 |
skeletal element | 2.52e-25 | 90 |
hemolymphoid system | 1.18e-23 | 108 |
immune system | 1.12e-22 | 93 |
skeletal system | 5.24e-22 | 100 |
lateral plate mesoderm | 1.40e-17 | 203 |
musculoskeletal system | 2.55e-17 | 167 |
mesoderm | 2.21e-13 | 315 |
mesoderm-derived structure | 2.21e-13 | 315 |
presumptive mesoderm | 2.21e-13 | 315 |
connective tissue | 2.42e-13 | 371 |
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