FFCP PHASE1:Mm9::chr10:68996381..68996414,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11735|HGNC=|MCL_coexpression_id=1906|UniProt=G3X971,Q3UVY0,Q8VC68,Q9QXH1|association_with_transcript=-41bp_to_NM_146005,NM_170688,NM_170689,NM_170690,NM_170728,NM_170729,NM_170730,uc007fmt.1,uc007fmu.1,uc007fmv.1,uc007fmw.1,uc007fmx.1,uc007fmy.1,uc007fmz.1,uc007fna.1,uc007fnb.1,uc007fnc.1_5end|description=CAGE_peak_7_at_Ank3_5end|id=chr10:68996381..68996414,+|ontology_enrichment_celltype=CL:0000117!1.28e-07!23;CL:0000337!1.28e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.61e-08,23;CL:0000337,3.61e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.19e-11!63;UBERON:0004121!1.41e-10!102;UBERON:0000924!1.41e-10!102;UBERON:0006601!1.41e-10!102;UBERON:0000153!4.00e-10!94;UBERON:0002346!4.45e-10!71;UBERON:0003075!4.45e-10!71;UBERON:0007284!4.45e-10!71;UBERON:0000073!1.04e-09!75;UBERON:0001016!1.04e-09!75;UBERON:0001049!1.36e-09!52;UBERON:0005068!1.36e-09!52;UBERON:0006241!1.36e-09!52;UBERON:0007135!1.36e-09!52;UBERON:0001017!1.46e-09!73;UBERON:0005743!1.46e-09!73;UBERON:0007811!1.63e-09!86;UBERON:0000955!2.87e-09!50;UBERON:0006238!2.87e-09!50;UBERON:0003056!3.03e-09!49;UBERON:0002616!9.72e-09!49;UBERON:0002020!2.76e-08!34;UBERON:0000468!1.04e-07!333;UBERON:0003080!1.32e-07!40;UBERON:0002780!2.55e-07!39;UBERON:0001890!2.55e-07!39;UBERON:0006240!2.55e-07!39;UBERON:0003103!3.89e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.40e-15,92;UBERON:0000073,1.03e-10,54;UBERON:0002346,2.21e-10,64;UBERON:0003075,2.21e-10,64;UBERON:0007284,2.21e-10,64;UBERON:0004121,4.27e-10,95;UBERON:0000924,4.27e-10,95;UBERON:0006601,4.27e-10,95;UBERON:0001049,1.94e-09,52;UBERON:0005068,1.94e-09,52;UBERON:0006241,1.94e-09,52;UBERON:0007135,1.94e-09,52;UBERON:0010371,2.01e-09,73;UBERON:0001016,2.61e-09,75;UBERON:0001017,3.77e-09,73;UBERON:0003056,4.72e-09,49;UBERON:0002020,1.64e-08,34;UBERON:0003103,7.02e-08,43;UBERON:0000955,1.56e-07,47;UBERON:0006238,1.56e-07,47;UBERON:0003080,2.71e-07,40;UBERON:0002616,5.13e-07,46;UBERON:0002780,5.39e-07,39;UBERON:0001890,5.39e-07,39;UBERON:0006240,5.39e-07,39|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65100772129174,3.04130793658544,3.30384153891027,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,5.46254444320914,5.28990979272033,1.90149421051854,0.338844532069132,0,0,0,0,0,0,1.24427534770173,1.89008313664367,1.26194976810829,3.99911378165325,4.8591079009355,1.5923803897944,2.87536413054709,1.83843757322004,6.60695285996332,6.51205424234457,7.83393319606842,6.59431438650969,5.30628332893976,5.73004707612436,1.67509799400829,6.75315132038016,5.19514042441154,7.07108605136802,7.26095572075425,4.84638559145781,2.42323818666189,2.11600368298999,0.579728977403356,0,0,0,0,0,1.26399978118577,1.02258193546835,1.29893002301434,0.35333957451034,4.78867627240714,7.69958864485907,7.64415719119937,7.11066703153331,0,0,0,1.02765491747154,0,0.890652834388949,1.21439728736295,1.82679286987285,2.07553947530453,0.60289056221049,1.76383060703557,0.251333182659351,0.247194967734374,0.289198713839823,0,3.07357014900077,1.98757366614354,1.45462575940567,0,1.75668478206928,1.25668024088073,0,0,0,0,4.04434726393021,6.40500843946077,3.8952849154988,6.08385120672968,6.64860189058859,8.93488591606108,7.78758062725237,2.13862664085664,1.24406970610093,0.758168275301024,1.26265113531884,3.12289063110489,1.60931473103431,4.86167750474443,4.52114453507145,4.42237244483631,5.38077625196369,3.37326208415024,2.58703370739016,2.80238390812695,3.78212160335639,3.16712023495108,0.43839146485515,2.78047249225598,3.83077383174383,4.32142486456681,2.7864797354589,0,0,0,6.21377317606506,3.04883877975425,5.22179978236943,7.33908680314152,7.28027657465394,5.707883176833,6.74348439776183,6.17028823219124,5.48797109125697,3.94943639792353,4.26835406605648,4.29664690593035,3.94739966048397,7.24515380460467,3.48936688776967,9.2527577368216,3.49875682089567,0,0,1.91959425481711,1.39342003116263,1.03093969057675,1.21010114774006,0.22237804384487,0.570676878337677,0,0.494096864172033,0.251335208800269,0.596869416123452,0,0,0,0,2.65535061334314,5.02693455482807,5.63538678365402,4.88763186828754,5.81857461502877,3.15611189506434,2.59269802209455,2.80459281161244,3.45397201251025,3.70191491765402,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0,0,0,0,0,0.37898282354097,0.651859905768103,0.848725428875941,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0.518054945597687,0,0,0,0,0.551873492609465,4.65596710964597,5.39173758324135,2.62295912602681,10.6037789425837,0.315508219416257,0.390438744296638,2.15423397732799,1.67278158566786,1.33679204449436,1.13230612315533,1.61924280669958,0.876767573733936,1.97643888973262,7.39039027770156,3.40656204499845,2.49291845134157,3.25773918707152,1.31976098378028,0,4.61283208694465,1.51161778482376,1.13163047853539,0.295301892880773,0.307435147943927,1.29214146584111,0.727067458955011,2.13898427030833,0,0,0,0.680879211507576,2.34079422240703,0.517434735131018,1.71469628025274,2.6601035046341,2.85390108163313,2.63278432963394,3.65357938937519,0.23467170806371,0,0.441056796109924,3.46261131177108,3.87514624070173,1.38719727334758,0.954978752025092,0.656563598980245,0.291480836629851,4.82105785227325,0,1.857481811669,0.740778109478847,0,0,0,0,0,0,0,0.949007980743406,1.82987520414164,1.40406943068342,2.09088296014469,1.9652630737156,1.34864346384821,1.40510874733071,0,0.129614973291793,0,0,0.598066184175915,0.496375471371293,0.388902376688095,0.516639293910924,0.337912250981556,0.938857909166032,0.911430693907651,0.209718688851422,0,2.01621004380506,0.632022241256357,2.63542779877213,4.21114924375792,2.85825810551149,3.58053391334963,2.38417625737518,2.04332264183947,2.51072196196781,0.605798699688886,1.143102099825,1.31074040677893,0.682205165178267,1.15454209968395,0.467507608726276,5.21479882314986,0,0,0,0.965947970160952,0.375364950902364,1.28206136987086,0.643105137237198,0,3.3885110557024,2.30162618253588,3.43737308063638,3.78077001156113,3.42541259885321,3.7769694869485,3.37511250115903,4.95353323546643,4.07828168085784,3.10656187051092,3.42498247027783,3.59122386060928,3.75613932659095,0.972426868273176,1.67690530102386,1.83843508450014,5.55616819504038,4.94484137373346,3.20919209591815,5.30664144703975,4.81610669791456,4.14977951049368,5.99305647807247,5.12201219238954,4.93945033018274,5.23923060411381,3.1288768005111,3.8581844092741,5.76920261124629,5.88795680537589,5.14303878578123,2.66213709239006,6.67621331852499,5.52316383202848,3.95259397744389,3.89227196301712,6.21955107767427,4.99832451731901,4.20992752922171,5.05028044491965,3.79632057997357,3.74317033027141,3.6830793885272,5.11291575913688,2.3148793317737,3.99696924700713,2.33931608445408,3.43793686477277,4.20834330551455,2.64709702943419,3.94175320554716|short_description=p7@Ank3}} | ||
|EntrezGene=11735 | |||
|HGNC= | |||
|MCL_coexpression_id=1906 | |||
|UniProt=G3X971,Q3UVY0,Q8VC68,Q9QXH1 | |||
|association_with_transcript=-41bp_to_NM_146005,NM_170688,NM_170689,NM_170690,NM_170728,NM_170729,NM_170730,uc007fmt.1,uc007fmu.1,uc007fmv.1,uc007fmw.1,uc007fmx.1,uc007fmy.1,uc007fmz.1,uc007fna.1,uc007fnb.1,uc007fnc.1_5end | |||
|description=CAGE_peak_7_at_Ank3_5end | |||
|id=chr10:68996381..68996414,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.28e-07!23;CL:0000337!1.28e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.61e-08,23;CL:0000337,3.61e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.19e-11!63;UBERON:0004121!1.41e-10!102;UBERON:0000924!1.41e-10!102;UBERON:0006601!1.41e-10!102;UBERON:0000153!4.00e-10!94;UBERON:0002346!4.45e-10!71;UBERON:0003075!4.45e-10!71;UBERON:0007284!4.45e-10!71;UBERON:0000073!1.04e-09!75;UBERON:0001016!1.04e-09!75;UBERON:0001049!1.36e-09!52;UBERON:0005068!1.36e-09!52;UBERON:0006241!1.36e-09!52;UBERON:0007135!1.36e-09!52;UBERON:0001017!1.46e-09!73;UBERON:0005743!1.46e-09!73;UBERON:0007811!1.63e-09!86;UBERON:0000955!2.87e-09!50;UBERON:0006238!2.87e-09!50;UBERON:0003056!3.03e-09!49;UBERON:0002616!9.72e-09!49;UBERON:0002020!2.76e-08!34;UBERON:0000468!1.04e-07!333;UBERON:0003080!1.32e-07!40;UBERON:0002780!2.55e-07!39;UBERON:0001890!2.55e-07!39;UBERON:0006240!2.55e-07!39;UBERON:0003103!3.89e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.40e-15,92;UBERON:0000073,1.03e-10,54;UBERON:0002346,2.21e-10,64;UBERON:0003075,2.21e-10,64;UBERON:0007284,2.21e-10,64;UBERON:0004121,4.27e-10,95;UBERON:0000924,4.27e-10,95;UBERON:0006601,4.27e-10,95;UBERON:0001049,1.94e-09,52;UBERON:0005068,1.94e-09,52;UBERON:0006241,1.94e-09,52;UBERON:0007135,1.94e-09,52;UBERON:0010371,2.01e-09,73;UBERON:0001016,2.61e-09,75;UBERON:0001017,3.77e-09,73;UBERON:0003056,4.72e-09,49;UBERON:0002020,1.64e-08,34;UBERON:0003103,7.02e-08,43;UBERON:0000955,1.56e-07,47;UBERON:0006238,1.56e-07,47;UBERON:0003080,2.71e-07,40;UBERON:0002616,5.13e-07,46;UBERON:0002780,5.39e-07,39;UBERON:0001890,5.39e-07,39;UBERON:0006240,5.39e-07,39 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65100772129174,3.04130793658544,3.30384153891027,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,5.46254444320914,5.28990979272033,1.90149421051854,0.338844532069132,0,0,0,0,0,0,1.24427534770173,1.89008313664367,1.26194976810829,3.99911378165325,4.8591079009355,1.5923803897944,2.87536413054709,1.83843757322004,6.60695285996332,6.51205424234457,7.83393319606842,6.59431438650969,5.30628332893976,5.73004707612436,1.67509799400829,6.75315132038016,5.19514042441154,7.07108605136802,7.26095572075425,4.84638559145781,2.42323818666189,2.11600368298999,0.579728977403356,0,0,0,0,0,1.26399978118577,1.02258193546835,1.29893002301434,0.35333957451034,4.78867627240714,7.69958864485907,7.64415719119937,7.11066703153331,0,0,0,1.02765491747154,0,0.890652834388949,1.21439728736295,1.82679286987285,2.07553947530453,0.60289056221049,1.76383060703557,0.251333182659351,0.247194967734374,0.289198713839823,0,3.07357014900077,1.98757366614354,1.45462575940567,0,1.75668478206928,1.25668024088073,0,0,0,0,4.04434726393021,6.40500843946077,3.8952849154988,6.08385120672968,6.64860189058859,8.93488591606108,7.78758062725237,2.13862664085664,1.24406970610093,0.758168275301024,1.26265113531884,3.12289063110489,1.60931473103431,4.86167750474443,4.52114453507145,4.42237244483631,5.38077625196369,3.37326208415024,2.58703370739016,2.80238390812695,3.78212160335639,3.16712023495108,0.43839146485515,2.78047249225598,3.83077383174383,4.32142486456681,2.7864797354589,0,0,0,6.21377317606506,3.04883877975425,5.22179978236943,7.33908680314152,7.28027657465394,5.707883176833,6.74348439776183,6.17028823219124,5.48797109125697,3.94943639792353,4.26835406605648,4.29664690593035,3.94739966048397,7.24515380460467,3.48936688776967,9.2527577368216,3.49875682089567,0,0,1.91959425481711,1.39342003116263,1.03093969057675,1.21010114774006,0.22237804384487,0.570676878337677,0,0.494096864172033,0.251335208800269,0.596869416123452,0,0,0,0,2.65535061334314,5.02693455482807,5.63538678365402,4.88763186828754,5.81857461502877,3.15611189506434,2.59269802209455,2.80459281161244,3.45397201251025,3.70191491765402,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0,0,0,0,0,0.37898282354097,0.651859905768103,0.848725428875941,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0.518054945597687,0,0,0,0,0.551873492609465,4.65596710964597,5.39173758324135,2.62295912602681,10.6037789425837,0.315508219416257,0.390438744296638,2.15423397732799,1.67278158566786,1.33679204449436,1.13230612315533,1.61924280669958,0.876767573733936,1.97643888973262,7.39039027770156,3.40656204499845,2.49291845134157,3.25773918707152,1.31976098378028,0,4.61283208694465,1.51161778482376,1.13163047853539,0.295301892880773,0.307435147943927,1.29214146584111,0.727067458955011,2.13898427030833,0,0,0,0.680879211507576,2.34079422240703,0.517434735131018,1.71469628025274,2.6601035046341,2.85390108163313,2.63278432963394,3.65357938937519,0.23467170806371,0,0.441056796109924,3.46261131177108,3.87514624070173,1.38719727334758,0.954978752025092,0.656563598980245,0.291480836629851,4.82105785227325,0,1.857481811669,0.740778109478847,0,0,0,0,0,0,0,0.949007980743406,1.82987520414164,1.40406943068342,2.09088296014469,1.9652630737156,1.34864346384821,1.40510874733071,0,0.129614973291793,0,0,0.598066184175915,0.496375471371293,0.388902376688095,0.516639293910924,0.337912250981556,0.938857909166032,0.911430693907651,0.209718688851422,0,2.01621004380506,0.632022241256357,2.63542779877213,4.21114924375792,2.85825810551149,3.58053391334963,2.38417625737518,2.04332264183947,2.51072196196781,0.605798699688886,1.143102099825,1.31074040677893,0.682205165178267,1.15454209968395,0.467507608726276,5.21479882314986,0,0,0,0.965947970160952,0.375364950902364,1.28206136987086,0.643105137237198,0,3.3885110557024,2.30162618253588,3.43737308063638,3.78077001156113,3.42541259885321,3.7769694869485,3.37511250115903,4.95353323546643,4.07828168085784,3.10656187051092,3.42498247027783,3.59122386060928,3.75613932659095,0.972426868273176,1.67690530102386,1.83843508450014,5.55616819504038,4.94484137373346,3.20919209591815,5.30664144703975,4.81610669791456,4.14977951049368,5.99305647807247,5.12201219238954,4.93945033018274,5.23923060411381,3.1288768005111,3.8581844092741,5.76920261124629,5.88795680537589,5.14303878578123,2.66213709239006,6.67621331852499,5.52316383202848,3.95259397744389,3.89227196301712,6.21955107767427,4.99832451731901,4.20992752922171,5.05028044491965,3.79632057997357,3.74317033027141,3.6830793885272,5.11291575913688,2.3148793317737,3.99696924700713,2.33931608445408,3.43793686477277,4.20834330551455,2.64709702943419,3.94175320554716 | |||
|short_description=p7@Ank3 | |||
}} |
Revision as of 17:14, 12 September 2013
Short description: | p7@Ank3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ank3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1906 |
Association with transcript: | -41bp_to_NM_146005, NM_170688, NM_170689, NM_170690, NM_170728, NM_170729, NM_170730, uc007fmt.1, uc007fmu.1, uc007fmv.1, uc007fmw.1, uc007fmx.1, uc007fmy.1, uc007fmz.1, uc007fna.1, uc007fnb.1, uc007fnc.1_5end |
EntrezGene: | Ank3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.61e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.61e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 7.40e-15 | 92 |
regional part of nervous system | 1.03e-10 | 54 |
neurectoderm | 2.21e-10 | 64 |
neural plate | 2.21e-10 | 64 |
presumptive neural plate | 2.21e-10 | 64 |
ectoderm-derived structure | 4.27e-10 | 95 |
ectoderm | 4.27e-10 | 95 |
presumptive ectoderm | 4.27e-10 | 95 |
neural tube | 1.94e-09 | 52 |
neural rod | 1.94e-09 | 52 |
future spinal cord | 1.94e-09 | 52 |
neural keel | 1.94e-09 | 52 |
ecto-epithelium | 2.01e-09 | 73 |
nervous system | 2.61e-09 | 75 |
central nervous system | 3.77e-09 | 73 |
pre-chordal neural plate | 4.72e-09 | 49 |
gray matter | 1.64e-08 | 34 |
compound organ | 7.02e-08 | 43 |
brain | 1.56e-07 | 47 |
future brain | 1.56e-07 | 47 |
anterior neural tube | 2.71e-07 | 40 |
regional part of brain | 5.13e-07 | 46 |
regional part of forebrain | 5.39e-07 | 39 |
forebrain | 5.39e-07 | 39 |
future forebrain | 5.39e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.