FFCP PHASE1:Hg19::chr2:27884081..27884103,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C102|description=CAGE_peak_at_chr2:27884081..27884103,+|id=chr2:27884081..27884103,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000511;2.71e-19;1!CL:0002625;2.71e-19;1!CL:0000216;2.71e-19;1!CL:0000575;2.48e-10;2!CL:0002600;2.48e-10;2!CL:0002564;2.63e-07;3|ontology_enrichment_celltype_v019_2=CL:0000511,1.30e-19,1;CL:0002625,1.30e-19,1;CL:0000216,1.30e-19,1;CL:0002600,2.27e-10,2;CL:0000575,2.99e-10,2;CL:0002564,3.35e-07,3|ontology_enrichment_development_v019=UBERON:0005425;2.71e-19;1!UBERON:0003056;2.63e-07;3|ontology_enrichment_disease=DOID:14566!2.12e-08!239;DOID:0050687!2.31e-08!143;DOID:162!4.13e-08!235;DOID:305!4.21e-07!106|ontology_enrichment_disease_v019=DOID:1909;2.48e-10;2|ontology_enrichment_disease_v019_2=DOID:1909,2.72e-10,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001136;2.71e-19;1!UBERON:0000941;2.71e-19;1!UBERON:0001343;2.71e-19;1!UBERON:0001785;2.71e-19;1!UBERON:0002464;2.71e-19;1!UBERON:0004904;2.71e-19;1!UBERON:0001021;2.71e-19;1!UBERON:0004910;2.71e-19;1!UBERON:0004813;2.71e-19;1!UBERON:0003714;2.48e-10;2!UBERON:0005162;2.48e-10;2!UBERON:0000122;2.48e-10;2!UBERON:0004909;2.48e-10;2!UBERON:0000010;4.61e-09;8!UBERON:0002242;2.63e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.30e-19,1;UBERON:0001343,1.30e-19,1;UBERON:0004910,1.30e-19,1;UBERON:0005154,1.30e-19,1;UBERON:0005295,1.30e-19,1;UBERON:0004813,1.30e-19,1;UBERON:0005297,1.30e-19,1;UBERON:0005294,1.30e-19,1;UBERON:0010141,1.30e-19,1;UBERON:0005891,1.30e-19,1;UBERON:0000941,1.56e-19,1;UBERON:0001785,1.56e-19,1;UBERON:0002464,1.56e-19,1;UBERON:0004904,1.56e-19,1;UBERON:0001021,1.56e-19,1;UBERON:0003902,1.56e-19,1;UBERON:0005425,1.56e-19,1;UBERON:0004909,1.72e-10,2;UBERON:0003714,1.89e-10,2;UBERON:0005162,1.89e-10,2;UBERON:0000122,1.89e-10,2;UBERON:0000010,4.09e-09,8;UBERON:0002242,3.35e-07,3;UBERON:0003068,3.35e-07,3;UBERON:0002328,3.35e-07,3;UBERON:0004880,3.35e-07,3|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.618831764800233,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.376627918784408,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0.0774672005803016,0.853015394924529,0,0,0,0,0,0,0,0.436194716338694,0.377875943688809,0,0,0,0,0.575384784644301,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336985893439485,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0.722878304769133,0,0.434539556882471,0,0,0.283604451492204,0.221729397462564,0.351339142772504,0.130979075497713,1.09288586487763,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0.33472061276467,0.805658634218294,0,0.488124115096339,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,1.06400514659507,0,0,0.24666754841716,0.311211035399766,0,0.490385709340376,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0.149448680551801,0.117434498643765,0.485618833104395,0.280901613404497,0,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.45071417671979,0.226864366320042,0.358779271377724,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0.302256294682921,0.339121184620975,0.193260853163297,0.272746120590835,0.573609190778008,0.243947412259191,0,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0.473227200159376,0.505754070234305,0.241011029883482,0.661763836394364,0,0.474541238222193,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0.857839051492628,0.658501712451753,0,0.402115889646523,0.462942225792648,0,0,0,0.463721619900307,0.234817388471643,0,0.462985512576611,0,0,0,0.246217006087397,0,0,0,0.335964256397719,0.141775097242386,0.447792613514241,0.581267877027924,0.383382679165211,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0.308482478109971,0.600686115687835,1.14330573052231,0,0,0.07333828582095,0.129271715757778,3.57656445851882,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0.602878754119172,0,0.199945982364114,0,0.502257091432126,0,0.479249710983165,0,0,0.144781306667579,0,0,0.336255431980582,0.394061520403854,0.431255149719035,0.385029108839245,0,0,0.773288812777695,0.837581326671744,0.637938751653163,0,0,0,0,1.00034104211935,0.271265023699736,0,0.535286966391485,0.473107245101804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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_at_chr2:27884081..27884103,+ | |||
|id=chr2:27884081..27884103,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.71e-19;1!CL:0002625;2.71e-19;1!CL:0000216;2.71e-19;1!CL:0000575;2.48e-10;2!CL:0002600;2.48e-10;2!CL:0002564;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.30e-19,1;CL:0002625,1.30e-19,1;CL:0000216,1.30e-19,1;CL:0002600,2.27e-10,2;CL:0000575,2.99e-10,2;CL:0002564,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.71e-19;1!UBERON:0003056;2.63e-07;3 | |||
|ontology_enrichment_disease=DOID:14566!2.12e-08!239;DOID:0050687!2.31e-08!143;DOID:162!4.13e-08!235;DOID:305!4.21e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.72e-10,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.71e-19;1!UBERON:0000941;2.71e-19;1!UBERON:0001343;2.71e-19;1!UBERON:0001785;2.71e-19;1!UBERON:0002464;2.71e-19;1!UBERON:0004904;2.71e-19;1!UBERON:0001021;2.71e-19;1!UBERON:0004910;2.71e-19;1!UBERON:0004813;2.71e-19;1!UBERON:0003714;2.48e-10;2!UBERON:0005162;2.48e-10;2!UBERON:0000122;2.48e-10;2!UBERON:0004909;2.48e-10;2!UBERON:0000010;4.61e-09;8!UBERON:0002242;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.30e-19,1;UBERON:0001343,1.30e-19,1;UBERON:0004910,1.30e-19,1;UBERON:0005154,1.30e-19,1;UBERON:0005295,1.30e-19,1;UBERON:0004813,1.30e-19,1;UBERON:0005297,1.30e-19,1;UBERON:0005294,1.30e-19,1;UBERON:0010141,1.30e-19,1;UBERON:0005891,1.30e-19,1;UBERON:0000941,1.56e-19,1;UBERON:0001785,1.56e-19,1;UBERON:0002464,1.56e-19,1;UBERON:0004904,1.56e-19,1;UBERON:0001021,1.56e-19,1;UBERON:0003902,1.56e-19,1;UBERON:0005425,1.56e-19,1;UBERON:0004909,1.72e-10,2;UBERON:0003714,1.89e-10,2;UBERON:0005162,1.89e-10,2;UBERON:0000122,1.89e-10,2;UBERON:0000010,4.09e-09,8;UBERON:0002242,3.35e-07,3;UBERON:0003068,3.35e-07,3;UBERON:0002328,3.35e-07,3;UBERON:0004880,3.35e-07,3 | |||
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| |||
|short_description=p@chr2:27884081..27884103,+ | |||
}} |
Revision as of 18:08, 12 September 2013
Short description: | p@chr2:27884081..27884103, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:27884081..27884103, + |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.30e-19 | 1 |
seminiferous tubule epithelial cell | 1.30e-19 | 1 |
Sertoli cell | 1.30e-19 | 1 |
smooth muscle cell of trachea | 2.27e-10 | 2 |
corneal epithelial cell | 2.99e-10 | 2 |
nucleus pulposus cell of intervertebral disc | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.30e-19 | 1 |
seminiferous tubule of testis | 1.30e-19 | 1 |
epithelium of male gonad | 1.30e-19 | 1 |
epithelial cord | 1.30e-19 | 1 |
sex cord | 1.30e-19 | 1 |
seminiferous tubule epithelium | 1.30e-19 | 1 |
testis sex cord | 1.30e-19 | 1 |
genital ridge | 1.30e-19 | 1 |
primitive sex cord of indifferent gonad | 1.30e-19 | 1 |
coelomic epithelium | 1.30e-19 | 1 |
cranial nerve II | 1.56e-19 | 1 |
cranial nerve | 1.56e-19 | 1 |
nerve trunk | 1.56e-19 | 1 |
nerve connecting eye with brain | 1.56e-19 | 1 |
nerve | 1.56e-19 | 1 |
retinal neural layer | 1.56e-19 | 1 |
presumptive neural retina | 1.56e-19 | 1 |
epithelium of gonad | 1.72e-10 | 2 |
neural tissue | 1.89e-10 | 2 |
multi cell component structure | 1.89e-10 | 2 |
neuron projection bundle | 1.89e-10 | 2 |
peripheral nervous system | 4.09e-09 | 8 |
nucleus pulposus | 3.35e-07 | 3 |
axial mesoderm | 3.35e-07 | 3 |
notochord | 3.35e-07 | 3 |
chordamesoderm | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.72e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.