FFCP PHASE1:Hg19::chr3:189558175..189558179,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:189558175..189558179,+|id=chr3:189558175..189558179,+|ontology_enrichment_celltype=CL:0002076!2.33e-16!43;CL:0000223!4.05e-14!59;CL:0002251!4.55e-13!21;CL:0002621!7.24e-07!3|ontology_enrichment_celltype_v019=CL:0000083;2.97e-09;4!CL:0002076;2.92e-07;42|ontology_enrichment_celltype_v019_2=CL:0000083,3.30e-09,4;CL:0000223,3.36e-08,58;CL:0002076,9.29e-07,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!9.98e-13!14|ontology_enrichment_disease_v019=DOID:1749;1.60e-14;14!DOID:1799;7.82e-10;1!DOID:10165;7.82e-10;1!DOID:3151;7.82e-10;1!DOID:1798;7.82e-10;1!DOID:3149;7.82e-10;1!DOID:1793;2.97e-09;4|ontology_enrichment_disease_v019_2=DOID:1749,1.45e-14,14;DOID:1799,7.50e-10,1;DOID:10165,7.50e-10,1;DOID:1798,7.50e-10,1;DOID:3151,8.91e-10,1;DOID:3149,8.91e-10,1;DOID:1793,3.30e-09,4|ontology_enrichment_uberon=UBERON:0000161!6.53e-12!35;UBERON:0000974!2.01e-11!10;UBERON:0000166!3.60e-11!21;UBERON:0003729!6.93e-10!5;UBERON:0000165!6.81e-09!28;UBERON:0000930!6.81e-09!28;UBERON:0003343!1.04e-08!4;UBERON:0004785!1.04e-08!4;UBERON:0001004!4.50e-08!72;UBERON:0006562!1.12e-07!11;UBERON:0003135!2.68e-07!11;UBERON:0001723!5.94e-07!3;UBERON:0001033!5.94e-07!3;UBERON:0010056!5.94e-07!3;UBERON:0000344!6.65e-07!12;UBERON:0001949!7.24e-07!3|ontology_enrichment_uberon_v019=UBERON:0001389;4.86e-10;1!UBERON:0000026;4.86e-10;1!UBERON:0008784;4.86e-10;1!UBERON:0006058;4.86e-10;1!UBERON:0003663;4.86e-10;1!UBERON:0004256;4.86e-10;1!UBERON:0004708;4.86e-10;1!UBERON:0002101;4.86e-10;1!UBERON:0004709;4.86e-10;1!UBERON:0002529;4.86e-10;1!UBERON:0010538;4.86e-10;1!UBERON:0003661;4.86e-10;1!UBERON:0010890;4.86e-10;1!UBERON:0002471;4.86e-10;1!UBERON:0001383;4.86e-10;1!UBERON:0010758;4.86e-10;1!UBERON:0010707;4.86e-10;1!UBERON:0000978;4.86e-10;1!UBERON:0002103;4.86e-10;1!UBERON:0001665;4.86e-10;1!UBERON:0003823;4.86e-10;1!UBERON:0000154;4.86e-10;1!UBERON:0010709;4.86e-10;1!UBERON:0007029;7.82e-10;1!UBERON:0000014;2.00e-09;4!UBERON:0000178;2.83e-09;15!UBERON:0000179;2.83e-09;15!UBERON:0000463;2.83e-09;15!UBERON:0003343;2.97e-09;4!UBERON:0004785;2.97e-09;4!UBERON:0002331;3.22e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.46e-10,1;UBERON:0001389,4.46e-10,1;UBERON:0000026,4.46e-10,1;UBERON:0008784,4.46e-10,1;UBERON:0006058,4.46e-10,1;UBERON:0003663,4.46e-10,1;UBERON:0004256,4.46e-10,1;UBERON:0004708,4.46e-10,1;UBERON:0002101,4.46e-10,1;UBERON:0004709,4.46e-10,1;UBERON:0002529,4.46e-10,1;UBERON:0010538,4.46e-10,1;UBERON:0003661,4.46e-10,1;UBERON:0010890,4.46e-10,1;UBERON:0002471,4.46e-10,1;UBERON:0001383,4.46e-10,1;UBERON:0004357,4.46e-10,1;UBERON:0004347,4.46e-10,1;UBERON:0005420,4.46e-10,1;UBERON:0005732,4.46e-10,1;UBERON:0010758,4.46e-10,1;UBERON:0010707,4.46e-10,1;UBERON:0000978,4.46e-10,1;UBERON:0002103,4.46e-10,1;UBERON:0001665,4.46e-10,1;UBERON:0003823,4.46e-10,1;UBERON:0000154,4.46e-10,1;UBERON:0010709,4.46e-10,1;UBERON:0005733,4.46e-10,1;UBERON:0005730,4.46e-10,1;UBERON:0007029,5.79e-10,1;UBERON:0000014,1.84e-09,4;UBERON:0003343,2.79e-09,4;UBERON:0004785,2.79e-09,4;UBERON:0000178,2.80e-09,15;UBERON:0000179,2.80e-09,15;UBERON:0000463,2.80e-09,15;UBERON:0002331,3.30e-08,10;UBERON:0000358,3.30e-08,10;UBERON:0000307,3.30e-08,10;UBERON:0000091,3.30e-08,10;UBERON:0000087,3.30e-08,10;UBERON:0007010,3.30e-08,10;UBERON:0007806,3.30e-08,10;UBERON:0008780,3.30e-08,10;UBERON:0005728,3.30e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,1.13735385989937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,2.18196896472668,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.603173834469785,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.708875486211932,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,1.84161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,2.69066094311149,10.9746932745342,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:189558175..189558179,+ | |||
|id=chr3:189558175..189558179,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.33e-16!43;CL:0000223!4.05e-14!59;CL:0002251!4.55e-13!21;CL:0002621!7.24e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000083;2.97e-09;4!CL:0002076;2.92e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,3.30e-09,4;CL:0000223,3.36e-08,58;CL:0002076,9.29e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!9.98e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.60e-14;14!DOID:1799;7.82e-10;1!DOID:10165;7.82e-10;1!DOID:3151;7.82e-10;1!DOID:1798;7.82e-10;1!DOID:3149;7.82e-10;1!DOID:1793;2.97e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.45e-14,14;DOID:1799,7.50e-10,1;DOID:10165,7.50e-10,1;DOID:1798,7.50e-10,1;DOID:3151,8.91e-10,1;DOID:3149,8.91e-10,1;DOID:1793,3.30e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0000161!6.53e-12!35;UBERON:0000974!2.01e-11!10;UBERON:0000166!3.60e-11!21;UBERON:0003729!6.93e-10!5;UBERON:0000165!6.81e-09!28;UBERON:0000930!6.81e-09!28;UBERON:0003343!1.04e-08!4;UBERON:0004785!1.04e-08!4;UBERON:0001004!4.50e-08!72;UBERON:0006562!1.12e-07!11;UBERON:0003135!2.68e-07!11;UBERON:0001723!5.94e-07!3;UBERON:0001033!5.94e-07!3;UBERON:0010056!5.94e-07!3;UBERON:0000344!6.65e-07!12;UBERON:0001949!7.24e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;4.86e-10;1!UBERON:0000026;4.86e-10;1!UBERON:0008784;4.86e-10;1!UBERON:0006058;4.86e-10;1!UBERON:0003663;4.86e-10;1!UBERON:0004256;4.86e-10;1!UBERON:0004708;4.86e-10;1!UBERON:0002101;4.86e-10;1!UBERON:0004709;4.86e-10;1!UBERON:0002529;4.86e-10;1!UBERON:0010538;4.86e-10;1!UBERON:0003661;4.86e-10;1!UBERON:0010890;4.86e-10;1!UBERON:0002471;4.86e-10;1!UBERON:0001383;4.86e-10;1!UBERON:0010758;4.86e-10;1!UBERON:0010707;4.86e-10;1!UBERON:0000978;4.86e-10;1!UBERON:0002103;4.86e-10;1!UBERON:0001665;4.86e-10;1!UBERON:0003823;4.86e-10;1!UBERON:0000154;4.86e-10;1!UBERON:0010709;4.86e-10;1!UBERON:0007029;7.82e-10;1!UBERON:0000014;2.00e-09;4!UBERON:0000178;2.83e-09;15!UBERON:0000179;2.83e-09;15!UBERON:0000463;2.83e-09;15!UBERON:0003343;2.97e-09;4!UBERON:0004785;2.97e-09;4!UBERON:0002331;3.22e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.46e-10,1;UBERON:0001389,4.46e-10,1;UBERON:0000026,4.46e-10,1;UBERON:0008784,4.46e-10,1;UBERON:0006058,4.46e-10,1;UBERON:0003663,4.46e-10,1;UBERON:0004256,4.46e-10,1;UBERON:0004708,4.46e-10,1;UBERON:0002101,4.46e-10,1;UBERON:0004709,4.46e-10,1;UBERON:0002529,4.46e-10,1;UBERON:0010538,4.46e-10,1;UBERON:0003661,4.46e-10,1;UBERON:0010890,4.46e-10,1;UBERON:0002471,4.46e-10,1;UBERON:0001383,4.46e-10,1;UBERON:0004357,4.46e-10,1;UBERON:0004347,4.46e-10,1;UBERON:0005420,4.46e-10,1;UBERON:0005732,4.46e-10,1;UBERON:0010758,4.46e-10,1;UBERON:0010707,4.46e-10,1;UBERON:0000978,4.46e-10,1;UBERON:0002103,4.46e-10,1;UBERON:0001665,4.46e-10,1;UBERON:0003823,4.46e-10,1;UBERON:0000154,4.46e-10,1;UBERON:0010709,4.46e-10,1;UBERON:0005733,4.46e-10,1;UBERON:0005730,4.46e-10,1;UBERON:0007029,5.79e-10,1;UBERON:0000014,1.84e-09,4;UBERON:0003343,2.79e-09,4;UBERON:0004785,2.79e-09,4;UBERON:0000178,2.80e-09,15;UBERON:0000179,2.80e-09,15;UBERON:0000463,2.80e-09,15;UBERON:0002331,3.30e-08,10;UBERON:0000358,3.30e-08,10;UBERON:0000307,3.30e-08,10;UBERON:0000091,3.30e-08,10;UBERON:0000087,3.30e-08,10;UBERON:0007010,3.30e-08,10;UBERON:0007806,3.30e-08,10;UBERON:0008780,3.30e-08,10;UBERON:0005728,3.30e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,1.13735385989937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,2.18196896472668,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.603173834469785,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.708875486211932,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,1.84161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,2.69066094311149,10.9746932745342,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,2.3948309234694,0,0,0,0,0.260427761085233,0,0,1.137934482855,0.254253650292766,0,0,1.45802306691627,0,0,0,0,0,0,0,0,3.20674611840788,0.384751292518985,0,0.23056390438806,0.0897576444097721,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04085918757057,1.60633120630454,3.02823653565821,0,0.802577647298789,0,0.547364367646998,0,1.45668227720456,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0.293977192243133,0.522355239482415,0.52418000472609,0,0,0,0,0.387956065953678,0,0,0,0,0.0633107959558787,0,0,0,0.999048047910651,0,0.229073192331831,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,2.34804281319486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,1.74972571146949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.999936979274649,0,0,0,0,0.839277046316667,0.622077260032973,0,0,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35554524402461,0.353909170043221,1.65085738669511,0.693153996902029,0,0,0,0.0752103283492573,0,0,2.3571602503328,0,0,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0,0.177404740325278,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0,0,0,3.23714418593947,0.205325613712494,2.3196288626764,2.91426595835484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60698544745092,0.352894871715692,0,0,0,0,0,0,0.872701380680755,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0.0757786982182394,0.267964130156178,0,0,0.639701945702943,0.476128862927481,0,0.434523000071005,0,0,0,1.52401723527873,0.684466602170562,0.336760265072938,0.0717222053926763,0.665320713092027,0.244209805832924,0.106727345877715,0,0,0,0.244482888365733,0.813792356631477,0.665756774185513,0,0 | |||
|short_description=p@chr3:189558175..189558179,+ | |||
}} |
Revision as of 23:19, 12 September 2013
Short description: | p@chr3:189558175..189558179, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:189558175..189558179, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 3.30e-09 | 4 |
endodermal cell | 3.36e-08 | 58 |
endo-epithelial cell | 9.29e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.45e-14 | 14 |
islet cell tumor | 7.50e-10 | 1 |
endocrine pancreas cancer | 7.50e-10 | 1 |
pancreatic endocrine carcinoma | 7.50e-10 | 1 |
skin squamous cell carcinoma | 8.91e-10 | 1 |
keratoacanthoma | 8.91e-10 | 1 |
pancreatic cancer | 3.30e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.