FFCP PHASE1:Mm9::chr12:84861386..84861397,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=73828|HGNC=|UniProt=Q99LF7|association_with_transcript=-18bp_to_ENSMUST00000021645,NM_030246,uc011yop.1_5end|description=CAGE_peak_4_at_Dcaf4_5end|id=chr12:84861386..84861397,+|ontology_enrichment_celltype=CL:0000117!1.38e-09!23;CL:0000337!1.38e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.81e-11,23;CL:0000337,3.81e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.44e-09!52;UBERON:0005068!1.44e-09!52;UBERON:0006241!1.44e-09!52;UBERON:0007135!1.44e-09!52;UBERON:0002346!1.98e-08!71;UBERON:0003075!1.98e-08!71;UBERON:0007284!1.98e-08!71;UBERON:0000955!3.49e-08!50;UBERON:0006238!3.49e-08!50;UBERON:0007023!3.90e-08!51;UBERON:0002020!6.65e-08!34;UBERON:0002616!7.38e-08!49;UBERON:0004121!8.59e-08!102;UBERON:0000924!8.59e-08!102;UBERON:0006601!8.59e-08!102;UBERON:0003076!7.28e-07!12;UBERON:0003057!7.28e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0003076,8.57e-11,12;UBERON:0003057,8.57e-11,12;UBERON:0004121,5.60e-10,95;UBERON:0000924,5.60e-10,95;UBERON:0006601,5.60e-10,95;UBERON:0000073,7.36e-10,54;UBERON:0010371,8.81e-10,73;UBERON:0007023,9.96e-10,51;UBERON:0001049,6.33e-09,52;UBERON:0005068,6.33e-09,52;UBERON:0006241,6.33e-09,52;UBERON:0007135,6.33e-09,52;UBERON:0001017,2.52e-08,73;UBERON:0001016,7.81e-08,75;UBERON:0002240,2.03e-07,6;UBERON:0005174,2.03e-07,6;UBERON:0001137,2.03e-07,6;UBERON:0002346,2.75e-07,64;UBERON:0003075,2.75e-07,64;UBERON:0007284,2.75e-07,64|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0.700837921786577,1.29123323441576,0,0,1.02730780935303,0.478632953972018,1.36960583944965,2.18551006047494,0.333109761815663,0.404950534779652,1.39912375625629,0.788655413395594,0.822686601634433,0.84877930359606,0.850432901510698,0.0992909512008853,0.261199789138935,0.799962113967033,0.91763712426868,0,0,0.646413698057667,1.14014051673824,0.756090389279792,0.221730510655305,0.635030673459631,0,0,0.866554859253824,1.99481574430191,0.816677425049476,0.418531630736908,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,1.56478268869608,0.218025156380447,0.659058548203415,0.58328969722285,0.419959264876088,0,0.335565212115473,1.45072428402269,0,0.257259436035947,0,0,1.21389876515759,2.11596391708813,1.26766280701236,0.677689064138264,0,0.449949858640699,0,0.7104801149461,0.599200221036809,0,0.725827286159344,0.540023753326763,1.47227472945967,1.71390590642282,2.42955395046775,0.61245399607477,0.862609239164127,0.919218786610021,1.10115880999389,1.78762273319263,1.84327839907492,1.31886287730194,1.18933936683133,3.12548022334056,1.95428099300967,1.68828783009504,1.5279824777681,2.65165726926301,2.70506193518296,1.4911955666024,0,0.226714680320357,0,0,0,0,0.649776417447669,0.896053774194671,0.280888840263504,0.170430322578058,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,1.48442139064825,0.520455980298408,1.21786191324856,1.15307748628029,0.904335843315735,0.23517741427141,1.0053327306374,0.741584903203122,0.86759614151947,0,0.485300549842228,0.883366073841574,0.484875253135222,3.72783522436244,2.92780797011547,1.67557365450764,0.766371165625774,0.11981512450592,1.19980546198682,0.127070227073065,3.74476598512057,1.83000241127451,0.753926112677186,1.56441888173049,0.255715457330331,2.49345653471472,1.62241263067758,0.101839363850316,0.746441823660558,3.0326731012041,2.10441855886474,0.130120442962704,0.229902104433473,0,0.30140963567143,0.136072998302656,0.512454881139399,0.843315521037559,2.58703370739016,0.215567992932842,0.378212160335639,0.527853372491847,0.219195732427575,0.556094498451196,0,0.61734640922383,0.199034266818493,0,0,0.568326998791185,0.207125772535502,0.703578179943289,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0.32833492815819,0.162137619091711,0.438599962275997,0.878200461164203,0,2.52347938276953,0.617427674275707,0.330418782983798,1.58670339998127,0.213288250535234,0.464473343720877,0.77320476793256,0.403367049246685,0.444756087689741,0.570676878337677,1.42358718463353,0.164698954724011,1.00534083520108,0.397912944082302,0,0,1.51296634912286,1.1948476395262,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.0701358198903186,0.379419222745544,0.295220295959204,0.156998727841375,0.370191491765402,0,0.166845105716094,0.589676985339609,1.12431056192427,1.42002084971952,0.482354319504834,0.50925170356284,0.287696137450811,0.324270453550071,0.549122826376163,0,0,0,0,0.538192240565737,0,0.369506380333209,0,0.651859905768103,0.509235257325564,0.938760993154008,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0,0.433947175744535,0,0,1.47529281905711,1.10374698521893,3.53211297973142,1.64096361229084,0.163934945376675,0.252470927204373,0.631016438832513,0,0.430846795465598,0,0,0.283076530788832,0,0,0,1.28528526568723,0.425820255624806,0.178065603667255,0.325773918707152,0.164970122972535,1.32745138339963,0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| ||
|EntrezGene=73828 | |||
|HGNC= | |||
|UniProt=Q99LF7 | |||
|association_with_transcript=-18bp_to_ENSMUST00000021645,NM_030246,uc011yop.1_5end | |||
|description=CAGE_peak_4_at_Dcaf4_5end | |||
|id=chr12:84861386..84861397,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.38e-09!23;CL:0000337!1.38e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.81e-11,23;CL:0000337,3.81e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.44e-09!52;UBERON:0005068!1.44e-09!52;UBERON:0006241!1.44e-09!52;UBERON:0007135!1.44e-09!52;UBERON:0002346!1.98e-08!71;UBERON:0003075!1.98e-08!71;UBERON:0007284!1.98e-08!71;UBERON:0000955!3.49e-08!50;UBERON:0006238!3.49e-08!50;UBERON:0007023!3.90e-08!51;UBERON:0002020!6.65e-08!34;UBERON:0002616!7.38e-08!49;UBERON:0004121!8.59e-08!102;UBERON:0000924!8.59e-08!102;UBERON:0006601!8.59e-08!102;UBERON:0003076!7.28e-07!12;UBERON:0003057!7.28e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,8.57e-11,12;UBERON:0003057,8.57e-11,12;UBERON:0004121,5.60e-10,95;UBERON:0000924,5.60e-10,95;UBERON:0006601,5.60e-10,95;UBERON:0000073,7.36e-10,54;UBERON:0010371,8.81e-10,73;UBERON:0007023,9.96e-10,51;UBERON:0001049,6.33e-09,52;UBERON:0005068,6.33e-09,52;UBERON:0006241,6.33e-09,52;UBERON:0007135,6.33e-09,52;UBERON:0001017,2.52e-08,73;UBERON:0001016,7.81e-08,75;UBERON:0002240,2.03e-07,6;UBERON:0005174,2.03e-07,6;UBERON:0001137,2.03e-07,6;UBERON:0002346,2.75e-07,64;UBERON:0003075,2.75e-07,64;UBERON:0007284,2.75e-07,64 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0.700837921786577,1.29123323441576,0,0,1.02730780935303,0.478632953972018,1.36960583944965,2.18551006047494,0.333109761815663,0.404950534779652,1.39912375625629,0.788655413395594,0.822686601634433,0.84877930359606,0.850432901510698,0.0992909512008853,0.261199789138935,0.799962113967033,0.91763712426868,0,0,0.646413698057667,1.14014051673824,0.756090389279792,0.221730510655305,0.635030673459631,0,0,0.866554859253824,1.99481574430191,0.816677425049476,0.418531630736908,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,1.56478268869608,0.218025156380447,0.659058548203415,0.58328969722285,0.419959264876088,0,0.335565212115473,1.45072428402269,0,0.257259436035947,0,0,1.21389876515759,2.11596391708813,1.26766280701236,0.677689064138264,0,0.449949858640699,0,0.7104801149461,0.599200221036809,0,0.725827286159344,0.540023753326763,1.47227472945967,1.71390590642282,2.42955395046775,0.61245399607477,0.862609239164127,0.919218786610021,1.10115880999389,1.78762273319263,1.84327839907492,1.31886287730194,1.18933936683133,3.12548022334056,1.95428099300967,1.68828783009504,1.5279824777681,2.65165726926301,2.70506193518296,1.4911955666024,0,0.226714680320357,0,0,0,0,0.649776417447669,0.896053774194671,0.280888840263504,0.170430322578058,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,1.48442139064825,0.520455980298408,1.21786191324856,1.15307748628029,0.904335843315735,0.23517741427141,1.0053327306374,0.741584903203122,0.86759614151947,0,0.485300549842228,0.883366073841574,0.484875253135222,3.72783522436244,2.92780797011547,1.67557365450764,0.766371165625774,0.11981512450592,1.19980546198682,0.127070227073065,3.74476598512057,1.83000241127451,0.753926112677186,1.56441888173049,0.255715457330331,2.49345653471472,1.62241263067758,0.101839363850316,0.746441823660558,3.0326731012041,2.10441855886474,0.130120442962704,0.229902104433473,0,0.30140963567143,0.136072998302656,0.512454881139399,0.843315521037559,2.58703370739016,0.215567992932842,0.378212160335639,0.527853372491847,0.219195732427575,0.556094498451196,0,0.61734640922383,0.199034266818493,0,0,0.568326998791185,0.207125772535502,0.703578179943289,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0.32833492815819,0.162137619091711,0.438599962275997,0.878200461164203,0,2.52347938276953,0.617427674275707,0.330418782983798,1.58670339998127,0.213288250535234,0.464473343720877,0.77320476793256,0.403367049246685,0.444756087689741,0.570676878337677,1.42358718463353,0.164698954724011,1.00534083520108,0.397912944082302,0,0,1.51296634912286,1.1948476395262,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.0701358198903186,0.379419222745544,0.295220295959204,0.156998727841375,0.370191491765402,0,0.166845105716094,0.589676985339609,1.12431056192427,1.42002084971952,0.482354319504834,0.50925170356284,0.287696137450811,0.324270453550071,0.549122826376163,0,0,0,0,0.538192240565737,0,0.369506380333209,0,0.651859905768103,0.509235257325564,0.938760993154008,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0,0.433947175744535,0,0,1.47529281905711,1.10374698521893,3.53211297973142,1.64096361229084,0.163934945376675,0.252470927204373,0.631016438832513,0,0.430846795465598,0,0,0.283076530788832,0,0,0,1.28528526568723,0.425820255624806,0.178065603667255,0.325773918707152,0.164970122972535,1.32745138339963,0.728341908464944,0.604647113929502,0.754420319023592,0.590603785761546,0.614870295887855,0.516856586336442,0,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,0.340439605753788,0.36012218806262,0.646793418913773,0.857348140126369,0.354680467284547,0,0.329098041204242,0.304464949114599,0.704015124191131,1.0591603543191,1.54369878638473,1.15420377059036,1.13025098687134,1.26657142349127,1.90995750405018,1.31312719796049,0.582961673259701,2.96680483216816,1.19609616558497,0.206386867963223,0.740778109478847,1.31857919903284,0.683471138605126,1.37266903923914,0,0.139951452323658,0,0,0.474503990371703,0.203319467126849,0.540026704109006,0.627264888043406,0.436725127492355,0.539457385539283,0.41326727862668,1.30877970992015,0.388844919875379,1.24267862617385,1.12738587736838,0,0.496375471371293,0.777804753376191,0.774958940866387,0.506868376472335,0.352071715937262,0.39061315453185,1.25831213310853,0.724752362478018,0.576060012515731,0.948033361884535,1.01362607645082,0.616265742988964,0.25984164595559,0.895133478337407,0.596044064343795,1.20195449519969,0.886137163047463,0.706765149637033,0.762068066549998,0.604957110821043,0.292373642219257,0.769694733122636,1.05189211963412,0.226730383615211,1.33191572024439,0.538283139656854,1.67884616364078,1.15913756419314,0.187682475451182,0.36630324853453,1.71494703263253,2.00628841614145,0.564751842617067,0.460325236507177,1.14579102687879,0.515559547031063,0.685082519770642,0,0.675022500231806,1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| |||
|short_description=p4@Dcaf4 | |||
}} |
Revision as of 23:25, 12 September 2013
Short description: | p4@Dcaf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dcaf4_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENSMUST00000021645, NM_030246, uc011yop.1_5end |
EntrezGene: | Dcaf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.81e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.81e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 8.57e-11 | 12 |
chordal neural plate | 8.57e-11 | 12 |
ectoderm-derived structure | 5.60e-10 | 95 |
ectoderm | 5.60e-10 | 95 |
presumptive ectoderm | 5.60e-10 | 95 |
regional part of nervous system | 7.36e-10 | 54 |
ecto-epithelium | 8.81e-10 | 73 |
adult organism | 9.96e-10 | 51 |
neural tube | 6.33e-09 | 52 |
neural rod | 6.33e-09 | 52 |
future spinal cord | 6.33e-09 | 52 |
neural keel | 6.33e-09 | 52 |
central nervous system | 2.52e-08 | 73 |
nervous system | 7.81e-08 | 75 |
spinal cord | 2.03e-07 | 6 |
dorsal region element | 2.03e-07 | 6 |
dorsum | 2.03e-07 | 6 |
neurectoderm | 2.75e-07 | 64 |
neural plate | 2.75e-07 | 64 |
presumptive neural plate | 2.75e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.