FFCP PHASE1:Mm9::chr14:119772158..119772162,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:119772158..119772162,+|id=chr14:119772158..119772162,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.67e-12!52;UBERON:0005068!3.67e-12!52;UBERON:0006241!3.67e-12!52;UBERON:0007135!3.67e-12!52;UBERON:0002021!4.17e-12!10;UBERON:0000411!4.17e-12!10;UBERON:0001950!4.17e-12!10;UBERON:0002020!1.31e-11!34;UBERON:0000955!1.95e-10!50;UBERON:0006238!1.95e-10!50;UBERON:0002616!6.66e-10!49;UBERON:0002791!2.58e-09!29;UBERON:0003528!2.58e-09!29;UBERON:0001893!2.58e-09!29;UBERON:0002619!3.90e-09!17;UBERON:0003080!5.17e-09!40;UBERON:0000025!5.32e-09!114;UBERON:0000956!8.09e-09!21;UBERON:0001869!8.09e-09!21;UBERON:0000203!8.09e-09!21;UBERON:0002346!1.15e-08!71;UBERON:0003075!1.15e-08!71;UBERON:0007284!1.15e-08!71;UBERON:0002780!1.67e-08!39;UBERON:0001890!1.67e-08!39;UBERON:0006240!1.67e-08!39;UBERON:0001017!2.22e-08!73;UBERON:0005743!2.22e-08!73;UBERON:0002048!5.04e-08!14;UBERON:0000117!5.04e-08!14;UBERON:0000171!5.04e-08!14;UBERON:0000170!5.04e-08!14;UBERON:0005597!5.04e-08!14;UBERON:0000118!5.04e-08!14;UBERON:0000073!7.04e-08!75;UBERON:0001016!7.04e-08!75;UBERON:0000033!1.21e-07!63;UBERON:0004111!1.74e-07!122;UBERON:0003056!2.55e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.47e-51,10;UBERON:0000411,8.47e-51,10;UBERON:0001950,8.47e-51,10;UBERON:0002619,1.38e-29,17;UBERON:0000956,8.47e-24,21;UBERON:0001869,8.47e-24,21;UBERON:0000203,8.47e-24,21;UBERON:0003528,6.54e-21,29;UBERON:0002791,6.54e-21,29;UBERON:0001893,6.54e-21,29;UBERON:0002020,1.10e-17,34;UBERON:0002780,2.77e-15,39;UBERON:0001890,2.77e-15,39;UBERON:0006240,2.77e-15,39;UBERON:0003080,7.09e-15,40;UBERON:0002616,8.56e-13,46;UBERON:0000955,1.69e-12,47;UBERON:0006238,1.69e-12,47;UBERON:0003056,6.08e-12,49;UBERON:0001049,3.45e-11,52;UBERON:0005068,3.45e-11,52;UBERON:0006241,3.45e-11,52;UBERON:0007135,3.45e-11,52;UBERON:0000073,9.86e-11,54;UBERON:0002346,7.11e-09,64;UBERON:0003075,7.11e-09,64;UBERON:0007284,7.11e-09,64;UBERON:0010371,1.24e-07,73;UBERON:0001017,1.24e-07,73;UBERON:0001851,1.53e-07,1;UBERON:0005889,1.53e-07,1;UBERON:0001016,2.14e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0,0,0.558365998002762,0,0.45839474333043,0.589257170947335,0.711858403995515,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.299581278809645,1.37250180845588,0,0.347648640384553,1.53429274398198,0.41557608911912,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0.281105173679186,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0.426576501070468,1.16118335930219,0.128867461322093,0,0,0,0.474529061544512,0,0,0.397912944082302,0,0,0,0,0,0.228497025219458,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.509235257325564,1.40814148973101,0.670025029767263,0.238043640886014,0.195133647857799,0.630540576424764,2.6575762757853,0.159454768657487,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.488660878060728,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,2.29158205375759,3.43706364687375,2.74033007908257,1.5107877947794,4.72515750162264,0.45032120322422,2.71885445390523,2.07104124700728,0,0.399024873401031,0,0,0,0,0.44449345560323,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0,0.282328141245992,0.338458431566706,0.73171189149109,0,0.543216455383447,0.561142271657738,0.237270036248348,0.0985044823755635,0,0,0,0,0.467863216890817,0,0,0,0|short_description=p@chr14:119772158..119772162,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:119772158..119772162,+ | |||
|id=chr14:119772158..119772162,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.67e-12!52;UBERON:0005068!3.67e-12!52;UBERON:0006241!3.67e-12!52;UBERON:0007135!3.67e-12!52;UBERON:0002021!4.17e-12!10;UBERON:0000411!4.17e-12!10;UBERON:0001950!4.17e-12!10;UBERON:0002020!1.31e-11!34;UBERON:0000955!1.95e-10!50;UBERON:0006238!1.95e-10!50;UBERON:0002616!6.66e-10!49;UBERON:0002791!2.58e-09!29;UBERON:0003528!2.58e-09!29;UBERON:0001893!2.58e-09!29;UBERON:0002619!3.90e-09!17;UBERON:0003080!5.17e-09!40;UBERON:0000025!5.32e-09!114;UBERON:0000956!8.09e-09!21;UBERON:0001869!8.09e-09!21;UBERON:0000203!8.09e-09!21;UBERON:0002346!1.15e-08!71;UBERON:0003075!1.15e-08!71;UBERON:0007284!1.15e-08!71;UBERON:0002780!1.67e-08!39;UBERON:0001890!1.67e-08!39;UBERON:0006240!1.67e-08!39;UBERON:0001017!2.22e-08!73;UBERON:0005743!2.22e-08!73;UBERON:0002048!5.04e-08!14;UBERON:0000117!5.04e-08!14;UBERON:0000171!5.04e-08!14;UBERON:0000170!5.04e-08!14;UBERON:0005597!5.04e-08!14;UBERON:0000118!5.04e-08!14;UBERON:0000073!7.04e-08!75;UBERON:0001016!7.04e-08!75;UBERON:0000033!1.21e-07!63;UBERON:0004111!1.74e-07!122;UBERON:0003056!2.55e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.47e-51,10;UBERON:0000411,8.47e-51,10;UBERON:0001950,8.47e-51,10;UBERON:0002619,1.38e-29,17;UBERON:0000956,8.47e-24,21;UBERON:0001869,8.47e-24,21;UBERON:0000203,8.47e-24,21;UBERON:0003528,6.54e-21,29;UBERON:0002791,6.54e-21,29;UBERON:0001893,6.54e-21,29;UBERON:0002020,1.10e-17,34;UBERON:0002780,2.77e-15,39;UBERON:0001890,2.77e-15,39;UBERON:0006240,2.77e-15,39;UBERON:0003080,7.09e-15,40;UBERON:0002616,8.56e-13,46;UBERON:0000955,1.69e-12,47;UBERON:0006238,1.69e-12,47;UBERON:0003056,6.08e-12,49;UBERON:0001049,3.45e-11,52;UBERON:0005068,3.45e-11,52;UBERON:0006241,3.45e-11,52;UBERON:0007135,3.45e-11,52;UBERON:0000073,9.86e-11,54;UBERON:0002346,7.11e-09,64;UBERON:0003075,7.11e-09,64;UBERON:0007284,7.11e-09,64;UBERON:0010371,1.24e-07,73;UBERON:0001017,1.24e-07,73;UBERON:0001851,1.53e-07,1;UBERON:0005889,1.53e-07,1;UBERON:0001016,2.14e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0,0,0.558365998002762,0,0.45839474333043,0.589257170947335,0.711858403995515,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.299581278809645,1.37250180845588,0,0.347648640384553,1.53429274398198,0.41557608911912,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0.281105173679186,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0.426576501070468,1.16118335930219,0.128867461322093,0,0,0,0.474529061544512,0,0,0.397912944082302,0,0,0,0,0,0.228497025219458,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.509235257325564,1.40814148973101,0.670025029767263,0.238043640886014,0.195133647857799,0.630540576424764,2.6575762757853,0.159454768657487,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.488660878060728,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,2.29158205375759,3.43706364687375,2.74033007908257,1.5107877947794,4.72515750162264,0.45032120322422,2.71885445390523,2.07104124700728,0,0.399024873401031,0,0,0,0,0.44449345560323,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0,0.282328141245992,0.338458431566706,0.73171189149109,0,0.543216455383447,0.561142271657738,0.237270036248348,0.0985044823755635,0,0,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr14:119772158..119772162,+ | |||
}} |
Revision as of 01:33, 13 September 2013
Short description: | p@chr14:119772158..119772162, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:119772158..119772162, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 8.47e-51 | 10 |
visual cortex | 8.47e-51 | 10 |
neocortex | 8.47e-51 | 10 |
regional part of cerebral cortex | 1.38e-29 | 17 |
cerebral cortex | 8.47e-24 | 21 |
cerebral hemisphere | 8.47e-24 | 21 |
pallium | 8.47e-24 | 21 |
brain grey matter | 6.54e-21 | 29 |
regional part of telencephalon | 6.54e-21 | 29 |
telencephalon | 6.54e-21 | 29 |
gray matter | 1.10e-17 | 34 |
regional part of forebrain | 2.77e-15 | 39 |
forebrain | 2.77e-15 | 39 |
future forebrain | 2.77e-15 | 39 |
anterior neural tube | 7.09e-15 | 40 |
regional part of brain | 8.56e-13 | 46 |
brain | 1.69e-12 | 47 |
future brain | 1.69e-12 | 47 |
pre-chordal neural plate | 6.08e-12 | 49 |
neural tube | 3.45e-11 | 52 |
neural rod | 3.45e-11 | 52 |
future spinal cord | 3.45e-11 | 52 |
neural keel | 3.45e-11 | 52 |
regional part of nervous system | 9.86e-11 | 54 |
neurectoderm | 7.11e-09 | 64 |
neural plate | 7.11e-09 | 64 |
presumptive neural plate | 7.11e-09 | 64 |
ecto-epithelium | 1.24e-07 | 73 |
central nervous system | 1.24e-07 | 73 |
cortex | 1.53e-07 | 1 |
zygote cortex | 1.53e-07 | 1 |
nervous system | 2.14e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.