FFCP PHASE1:Hg19::chr4:152330409..152330416,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=729830|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=34237|TSSclassifier=S|UniProt=Q05DH4,D6RBF5|association_with_transcript=11bp_to_ENST00000435205,ENST00000503146,NM_001109977,uc003imj.2_5end|coexpression_cluster_id=C80|description=CAGE_peak_5_at_FAM160A1_5end|id=chr4:152330409..152330416,+|ontology_enrichment_celltype=CL:0000784!4.52e-07!3|ontology_enrichment_celltype_v019=CL:0000784;2.41e-66;3!CL:0000451;2.76e-50;10!CL:0001014;2.03e-45;2!CL:0001016;2.03e-45;2!CL:0000840;6.72e-34;5!CL:0002032;2.62e-23;1!CL:0000557;2.62e-23;1!CL:0000990;6.95e-23;8!CL:0000453;7.24e-19;5!CL:0000244;9.63e-07;4!CL:0000731;9.63e-07;4|ontology_enrichment_celltype_v019_2=CL:0000784,1.92e-66,3;CL:0000451,2.49e-50,10;CL:0001014,2.04e-45,2;CL:0001016,2.04e-45,2;CL:0000840,6.72e-34,5;CL:0001029,6.72e-34,5;CL:0000990,6.95e-23,8;CL:0000453,7.24e-19,5;CL:0000244,9.63e-07,4;CL:0000731,9.63e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!1.08e-10!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!9.38e-11!48;UBERON:0005156!1.50e-09!59;UBERON:0000990!1.50e-09!59;UBERON:0005795!2.65e-08!22;UBERON:0003100!2.78e-08!41;UBERON:0003134!1.47e-07!37;UBERON:0000474!1.47e-07!37;UBERON:0000995!3.25e-07!21;UBERON:0004175!6.06e-07!25;UBERON:0003975!8.91e-07!22|ontology_enrichment_uberon_v019=UBERON:0001389;5.13e-23;1!UBERON:0000026;5.13e-23;1!UBERON:0008784;5.13e-23;1!UBERON:0006058;5.13e-23;1!UBERON:0003663;5.13e-23;1!UBERON:0004256;5.13e-23;1!UBERON:0004708;5.13e-23;1!UBERON:0002101;5.13e-23;1!UBERON:0004709;5.13e-23;1!UBERON:0002529;5.13e-23;1!UBERON:0010538;5.13e-23;1!UBERON:0003661;5.13e-23;1!UBERON:0010890;5.13e-23;1!UBERON:0002471;5.13e-23;1!UBERON:0001383;5.13e-23;1!UBERON:0010758;5.13e-23;1!UBERON:0010707;5.13e-23;1!UBERON:0000978;5.13e-23;1!UBERON:0002103;5.13e-23;1!UBERON:0001665;5.13e-23;1!UBERON:0003823;5.13e-23;1!UBERON:0000154;5.13e-23;1!UBERON:0010709;5.13e-23;1!UBERON:0005090;3.24e-12;2!UBERON:0001630;3.24e-12;2|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.10e-23,1;UBERON:0001389,4.10e-23,1;UBERON:0000026,4.10e-23,1;UBERON:0008784,4.10e-23,1;UBERON:0006058,4.10e-23,1;UBERON:0003663,4.10e-23,1;UBERON:0004256,4.10e-23,1;UBERON:0004708,4.10e-23,1;UBERON:0002101,4.10e-23,1;UBERON:0004709,4.10e-23,1;UBERON:0002529,4.10e-23,1;UBERON:0010538,4.10e-23,1;UBERON:0003661,4.10e-23,1;UBERON:0010890,4.10e-23,1;UBERON:0002471,4.10e-23,1;UBERON:0001383,4.10e-23,1;UBERON:0004357,4.10e-23,1;UBERON:0004347,4.10e-23,1;UBERON:0005420,4.10e-23,1;UBERON:0005732,4.10e-23,1;UBERON:0010758,4.10e-23,1;UBERON:0010707,4.10e-23,1;UBERON:0000978,4.10e-23,1;UBERON:0002103,4.10e-23,1;UBERON:0001665,4.10e-23,1;UBERON:0003823,4.10e-23,1;UBERON:0000154,4.10e-23,1;UBERON:0010709,4.10e-23,1;UBERON:0005733,4.10e-23,1;UBERON:0005730,4.10e-23,1;UBERON:0005090,2.90e-12,2;UBERON:0001630,2.90e-12,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,2.62339686735876,2.85997455390064,5.20040501861391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.220587945464788,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.567100388969546,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.269605053441981,0.358042349351218,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0.153900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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=729830 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34237 | |||
|TSSclassifier=S | |||
|UniProt=Q05DH4,D6RBF5 | |||
|association_with_transcript=11bp_to_ENST00000435205,ENST00000503146,NM_001109977,uc003imj.2_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_5_at_FAM160A1_5end | |||
|id=chr4:152330409..152330416,+ | |||
|ontology_enrichment_celltype=CL:0000784!4.52e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.41e-66;3!CL:0000451;2.76e-50;10!CL:0001014;2.03e-45;2!CL:0001016;2.03e-45;2!CL:0000840;6.72e-34;5!CL:0002032;2.62e-23;1!CL:0000557;2.62e-23;1!CL:0000990;6.95e-23;8!CL:0000453;7.24e-19;5!CL:0000244;9.63e-07;4!CL:0000731;9.63e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.92e-66,3;CL:0000451,2.49e-50,10;CL:0001014,2.04e-45,2;CL:0001016,2.04e-45,2;CL:0000840,6.72e-34,5;CL:0001029,6.72e-34,5;CL:0000990,6.95e-23,8;CL:0000453,7.24e-19,5;CL:0000244,9.63e-07,4;CL:0000731,9.63e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.08e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!9.38e-11!48;UBERON:0005156!1.50e-09!59;UBERON:0000990!1.50e-09!59;UBERON:0005795!2.65e-08!22;UBERON:0003100!2.78e-08!41;UBERON:0003134!1.47e-07!37;UBERON:0000474!1.47e-07!37;UBERON:0000995!3.25e-07!21;UBERON:0004175!6.06e-07!25;UBERON:0003975!8.91e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;5.13e-23;1!UBERON:0000026;5.13e-23;1!UBERON:0008784;5.13e-23;1!UBERON:0006058;5.13e-23;1!UBERON:0003663;5.13e-23;1!UBERON:0004256;5.13e-23;1!UBERON:0004708;5.13e-23;1!UBERON:0002101;5.13e-23;1!UBERON:0004709;5.13e-23;1!UBERON:0002529;5.13e-23;1!UBERON:0010538;5.13e-23;1!UBERON:0003661;5.13e-23;1!UBERON:0010890;5.13e-23;1!UBERON:0002471;5.13e-23;1!UBERON:0001383;5.13e-23;1!UBERON:0010758;5.13e-23;1!UBERON:0010707;5.13e-23;1!UBERON:0000978;5.13e-23;1!UBERON:0002103;5.13e-23;1!UBERON:0001665;5.13e-23;1!UBERON:0003823;5.13e-23;1!UBERON:0000154;5.13e-23;1!UBERON:0010709;5.13e-23;1!UBERON:0005090;3.24e-12;2!UBERON:0001630;3.24e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.10e-23,1;UBERON:0001389,4.10e-23,1;UBERON:0000026,4.10e-23,1;UBERON:0008784,4.10e-23,1;UBERON:0006058,4.10e-23,1;UBERON:0003663,4.10e-23,1;UBERON:0004256,4.10e-23,1;UBERON:0004708,4.10e-23,1;UBERON:0002101,4.10e-23,1;UBERON:0004709,4.10e-23,1;UBERON:0002529,4.10e-23,1;UBERON:0010538,4.10e-23,1;UBERON:0003661,4.10e-23,1;UBERON:0010890,4.10e-23,1;UBERON:0002471,4.10e-23,1;UBERON:0001383,4.10e-23,1;UBERON:0004357,4.10e-23,1;UBERON:0004347,4.10e-23,1;UBERON:0005420,4.10e-23,1;UBERON:0005732,4.10e-23,1;UBERON:0010758,4.10e-23,1;UBERON:0010707,4.10e-23,1;UBERON:0000978,4.10e-23,1;UBERON:0002103,4.10e-23,1;UBERON:0001665,4.10e-23,1;UBERON:0003823,4.10e-23,1;UBERON:0000154,4.10e-23,1;UBERON:0010709,4.10e-23,1;UBERON:0005733,4.10e-23,1;UBERON:0005730,4.10e-23,1;UBERON:0005090,2.90e-12,2;UBERON:0001630,2.90e-12,2 | |||
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|short_description=p5@FAM160A1 | |||
}} |
Revision as of 02:46, 13 September 2013
Short description: | p5@FAM160A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_FAM160A1_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 11bp_to_ENST00000435205, ENST00000503146, NM_001109977, uc003imj.2_5end |
EntrezGene: | FAM160A1 |
HGNC: | 34237 |
UniProt: | Q05DH4D6RBF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.92e-66 | 3 |
dendritic cell | 2.49e-50 | 10 |
CD1a-positive Langerhans cell | 2.04e-45 | 2 |
immature CD1a-positive Langerhans cell | 2.04e-45 | 2 |
immature conventional dendritic cell | 6.72e-34 | 5 |
common dendritic progenitor | 6.72e-34 | 5 |
conventional dendritic cell | 6.95e-23 | 8 |
Langerhans cell | 7.24e-19 | 5 |
transitional epithelial cell | 9.63e-07 | 4 |
urothelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 4.10e-23 | 1 |
soleus muscle | 4.10e-23 | 1 |
appendage | 4.10e-23 | 1 |
lower limb segment | 4.10e-23 | 1 |
multi-limb segment region | 4.10e-23 | 1 |
hindlimb muscle | 4.10e-23 | 1 |
hindlimb zeugopod muscle | 4.10e-23 | 1 |
paired limb/fin | 4.10e-23 | 1 |
limb | 4.10e-23 | 1 |
pelvic appendage | 4.10e-23 | 1 |
limb segment | 4.10e-23 | 1 |
paired limb/fin segment | 4.10e-23 | 1 |
limb muscle | 4.10e-23 | 1 |
pelvic complex muscle | 4.10e-23 | 1 |
zeugopod | 4.10e-23 | 1 |
muscle of leg | 4.10e-23 | 1 |
paired limb/fin bud | 4.10e-23 | 1 |
limb bud | 4.10e-23 | 1 |
pelvic appendage bud | 4.10e-23 | 1 |
limb/fin field | 4.10e-23 | 1 |
subdivision of organism along appendicular axis | 4.10e-23 | 1 |
appendage girdle complex | 4.10e-23 | 1 |
leg | 4.10e-23 | 1 |
hindlimb | 4.10e-23 | 1 |
triceps surae | 4.10e-23 | 1 |
hindlimb zeugopod | 4.10e-23 | 1 |
posterior region of body | 4.10e-23 | 1 |
pelvic complex | 4.10e-23 | 1 |
limb field | 4.10e-23 | 1 |
hindlimb/pelvic fin field | 4.10e-23 | 1 |
muscle structure | 2.90e-12 | 2 |
muscle organ | 2.90e-12 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.