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FFCP PHASE1:Mm9::chr14:75684203..75684214,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=67302|HGNC=|MCL_coexpression_id=7|UniProt=E9PW62|association_with_transcript=10bp_to_ENSMUST00000165404_5end|description=CAGE_peak_4_at_Zc3h13_5end|id=chr14:75684203..75684214,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,6.88e-07,23;CL:0000337,6.88e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.29e-11!34;UBERON:0001049!1.08e-10!52;UBERON:0005068!1.08e-10!52;UBERON:0006241!1.08e-10!52;UBERON:0007135!1.08e-10!52;UBERON:0001017!6.92e-10!73;UBERON:0005743!6.92e-10!73;UBERON:0003080!1.52e-09!40;UBERON:0000073!1.54e-09!75;UBERON:0001016!1.54e-09!75;UBERON:0002780!2.08e-09!39;UBERON:0001890!2.08e-09!39;UBERON:0006240!2.08e-09!39;UBERON:0003056!2.51e-09!49;UBERON:0002791!3.87e-09!29;UBERON:0003528!3.87e-09!29;UBERON:0001893!3.87e-09!29;UBERON:0000955!7.96e-09!50;UBERON:0006238!7.96e-09!50;UBERON:0000153!1.19e-08!94;UBERON:0002616!1.81e-08!49;UBERON:0000033!1.88e-08!63;UBERON:0007811!5.23e-08!86;UBERON:0002346!2.03e-07!71;UBERON:0003075!2.03e-07!71;UBERON:0007284!2.03e-07!71;UBERON:0000956!5.48e-07!21;UBERON:0001869!5.48e-07!21;UBERON:0000203!5.48e-07!21;UBERON:0004121!5.76e-07!102;UBERON:0000924!5.76e-07!102;UBERON:0006601!5.76e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.05e-11,54;UBERON:0001049,1.05e-11,52;UBERON:0005068,1.05e-11,52;UBERON:0006241,1.05e-11,52;UBERON:0007135,1.05e-11,52;UBERON:0002020,1.15e-11,34;UBERON:0001017,4.22e-11,73;UBERON:0001016,2.11e-10,75;UBERON:0003528,1.22e-09,29;UBERON:0002791,1.22e-09,29;UBERON:0001893,1.22e-09,29;UBERON:0000955,1.40e-09,47;UBERON:0006238,1.40e-09,47;UBERON:0002346,1.46e-09,64;UBERON:0003075,1.46e-09,64;UBERON:0007284,1.46e-09,64;UBERON:0003080,3.42e-09,40;UBERON:0002616,4.07e-09,46;UBERON:0002780,5.32e-09,39;UBERON:0001890,5.32e-09,39;UBERON:0006240,5.32e-09,39;UBERON:0010371,1.65e-08,73;UBERON:0004121,1.77e-08,95;UBERON:0000924,1.77e-08,95;UBERON:0006601,1.77e-08,95;UBERON:0003056,3.57e-08,49;UBERON:0000956,8.27e-07,21;UBERON:0001869,8.27e-07,21;UBERON:0000203,8.27e-07,21|phase1_expression=1.76163731815273,2.09385244583617,0.909998478779072,1.20985684522732,1.00179145989269,0.503637815735669,0.233612640595526,1.03298658753261,8.30653460694834,14.0438715793196,0.513653904676515,0.239316476986009,1.02720437958723,1.57356724354195,0,0.404950534779652,0.699561878128147,0,0.548457734422955,0.42438965179803,1.02051948181284,0.496454756004426,0.522399578277871,1.11994695955385,0.68822784320151,1.14846392823004,1.29228598847722,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,1.90509202037889,0,0,0.577703239502549,0.498703936075477,1.22501613757421,1.67412652294763,0,1.0470474879476,0.588231488031014,0,0,0.377690453926732,0.608261587317087,0.550640256485045,0,0.218025156380447,0.878744730937887,0.58328969722285,0.139986421625363,1.43752564364972,0.671130424230945,2.90144856804538,1.68046899571232,0.257259436035947,0.573066879877513,0,1.82084814773638,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,2.07379224616955,1.4850653216486,1.26194976810829,1.71390590642282,0.883474163806454,1.5923803897944,0.958454710182364,0.919218786610021,0,1.65993539510744,2.15049146558741,2.1101806036831,1.64677758484337,2.6045668527838,1.11673199600552,0.56276261003168,2.59757021220577,2.06240009831567,2.84743361598206,2.23679334990361,0.908714319998209,0.377857800533928,2.89864488701678,0,1.3599426674155,0.539703191637817,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0.845060518660083,1.28326477414318,0,0,0.432982082022428,0.506719730950197,0,0.5709193985953,1.03575153458869,0.29688427812965,0.173485326766136,0,0.461230994512117,0.301445281105245,1.05829836422134,0.251333182659351,1.48316980640624,0.289198713839823,0,0.808834249737046,0.441683036920787,0.484875253135222,0,0,1.46612694769419,1.78819938646014,0.838705871541442,1.19980546198682,0.889491589511453,1.04853447583376,1.37250180845588,1.13088916901578,2.43354048269187,3.3243009452943,2.28566849015516,1.46017136760982,0.916554274652847,0.746441823660558,0.758168275301024,0.210441855886474,1.30120442962704,0.689706313300419,0.900310649026746,1.05493372485001,0.816437989815934,1.15302348256365,1.12442069471675,0.776110112217047,0.431135985865684,1.32374256117473,1.93546236580344,0.657587197282725,1.39023624612799,1.39300866608867,0.411564272815887,0.398068533636986,0.702213187313235,0.772043721344145,1.42081749697796,0.207125772535502,1.17263029990548,0.180062061461015,0.473489471170421,1.18058539048442,0.925602677324269,0.697601834251224,0.268273401399619,0.934122738937356,0.987359099480883,0.820837320395476,0.891756905004413,0.438599962275997,0.878200461164203,0.268412837520744,2.10289948564127,2.6755199218614,2.31293148088659,1.32225283331772,0.426576501070468,0.464473343720877,0.38660238396628,0.80673409849337,0.667134131534611,0.760902504450237,1.89811624617805,0.164698954724011,1.00534083520108,1.98956472041151,0.58489226135736,2.69645822596266,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|EntrezGene=67302
|HGNC=
|MCL_coexpression_id=7
|UniProt=E9PW62
|association_with_transcript=10bp_to_ENSMUST00000165404_5end
|description=CAGE_peak_4_at_Zc3h13_5end
|id=chr14:75684203..75684214,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,6.88e-07,23;CL:0000337,6.88e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!4.29e-11!34;UBERON:0001049!1.08e-10!52;UBERON:0005068!1.08e-10!52;UBERON:0006241!1.08e-10!52;UBERON:0007135!1.08e-10!52;UBERON:0001017!6.92e-10!73;UBERON:0005743!6.92e-10!73;UBERON:0003080!1.52e-09!40;UBERON:0000073!1.54e-09!75;UBERON:0001016!1.54e-09!75;UBERON:0002780!2.08e-09!39;UBERON:0001890!2.08e-09!39;UBERON:0006240!2.08e-09!39;UBERON:0003056!2.51e-09!49;UBERON:0002791!3.87e-09!29;UBERON:0003528!3.87e-09!29;UBERON:0001893!3.87e-09!29;UBERON:0000955!7.96e-09!50;UBERON:0006238!7.96e-09!50;UBERON:0000153!1.19e-08!94;UBERON:0002616!1.81e-08!49;UBERON:0000033!1.88e-08!63;UBERON:0007811!5.23e-08!86;UBERON:0002346!2.03e-07!71;UBERON:0003075!2.03e-07!71;UBERON:0007284!2.03e-07!71;UBERON:0000956!5.48e-07!21;UBERON:0001869!5.48e-07!21;UBERON:0000203!5.48e-07!21;UBERON:0004121!5.76e-07!102;UBERON:0000924!5.76e-07!102;UBERON:0006601!5.76e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.05e-11,54;UBERON:0001049,1.05e-11,52;UBERON:0005068,1.05e-11,52;UBERON:0006241,1.05e-11,52;UBERON:0007135,1.05e-11,52;UBERON:0002020,1.15e-11,34;UBERON:0001017,4.22e-11,73;UBERON:0001016,2.11e-10,75;UBERON:0003528,1.22e-09,29;UBERON:0002791,1.22e-09,29;UBERON:0001893,1.22e-09,29;UBERON:0000955,1.40e-09,47;UBERON:0006238,1.40e-09,47;UBERON:0002346,1.46e-09,64;UBERON:0003075,1.46e-09,64;UBERON:0007284,1.46e-09,64;UBERON:0003080,3.42e-09,40;UBERON:0002616,4.07e-09,46;UBERON:0002780,5.32e-09,39;UBERON:0001890,5.32e-09,39;UBERON:0006240,5.32e-09,39;UBERON:0010371,1.65e-08,73;UBERON:0004121,1.77e-08,95;UBERON:0000924,1.77e-08,95;UBERON:0006601,1.77e-08,95;UBERON:0003056,3.57e-08,49;UBERON:0000956,8.27e-07,21;UBERON:0001869,8.27e-07,21;UBERON:0000203,8.27e-07,21
|phase1_expression=1.76163731815273,2.09385244583617,0.909998478779072,1.20985684522732,1.00179145989269,0.503637815735669,0.233612640595526,1.03298658753261,8.30653460694834,14.0438715793196,0.513653904676515,0.239316476986009,1.02720437958723,1.57356724354195,0,0.404950534779652,0.699561878128147,0,0.548457734422955,0.42438965179803,1.02051948181284,0.496454756004426,0.522399578277871,1.11994695955385,0.68822784320151,1.14846392823004,1.29228598847722,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,1.90509202037889,0,0,0.577703239502549,0.498703936075477,1.22501613757421,1.67412652294763,0,1.0470474879476,0.588231488031014,0,0,0.377690453926732,0.608261587317087,0.550640256485045,0,0.218025156380447,0.878744730937887,0.58328969722285,0.139986421625363,1.43752564364972,0.671130424230945,2.90144856804538,1.68046899571232,0.257259436035947,0.573066879877513,0,1.82084814773638,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,2.07379224616955,1.4850653216486,1.26194976810829,1.71390590642282,0.883474163806454,1.5923803897944,0.958454710182364,0.919218786610021,0,1.65993539510744,2.15049146558741,2.1101806036831,1.64677758484337,2.6045668527838,1.11673199600552,0.56276261003168,2.59757021220577,2.06240009831567,2.84743361598206,2.23679334990361,0.908714319998209,0.377857800533928,2.89864488701678,0,1.3599426674155,0.539703191637817,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0.845060518660083,1.28326477414318,0,0,0.432982082022428,0.506719730950197,0,0.5709193985953,1.03575153458869,0.29688427812965,0.173485326766136,0,0.461230994512117,0.301445281105245,1.05829836422134,0.251333182659351,1.48316980640624,0.289198713839823,0,0.808834249737046,0.441683036920787,0.484875253135222,0,0,1.46612694769419,1.78819938646014,0.838705871541442,1.19980546198682,0.889491589511453,1.04853447583376,1.37250180845588,1.13088916901578,2.43354048269187,3.3243009452943,2.28566849015516,1.46017136760982,0.916554274652847,0.746441823660558,0.758168275301024,0.210441855886474,1.30120442962704,0.689706313300419,0.900310649026746,1.05493372485001,0.816437989815934,1.15302348256365,1.12442069471675,0.776110112217047,0.431135985865684,1.32374256117473,1.93546236580344,0.657587197282725,1.39023624612799,1.39300866608867,0.411564272815887,0.398068533636986,0.702213187313235,0.772043721344145,1.42081749697796,0.207125772535502,1.17263029990548,0.180062061461015,0.473489471170421,1.18058539048442,0.925602677324269,0.697601834251224,0.268273401399619,0.934122738937356,0.987359099480883,0.820837320395476,0.891756905004413,0.438599962275997,0.878200461164203,0.268412837520744,2.10289948564127,2.6755199218614,2.31293148088659,1.32225283331772,0.426576501070468,0.464473343720877,0.38660238396628,0.80673409849337,0.667134131534611,0.760902504450237,1.89811624617805,0.164698954724011,1.00534083520108,1.98956472041151,0.58489226135736,2.69645822596266,1.72910439899755,0.796565093017469,0.569003702859245,0.913988100877831,1.1270773567308,1.22190796707189,0.775809948670503,0.701358198903186,0.316182685621286,0.442830443938806,0.627994911365499,0.370191491765402,0.889357881261447,0.333690211432188,0.982794975566015,0.674586337154561,0.202860121388503,0.72353147925725,0.763877555344259,1.43848068725405,0.972811360650212,0,0,0,0.312037673114561,0.757736633841335,0,0,0.923765950833023,1.32643988239339,0.162964976442026,0.509235257325564,1.87752198630802,0.335012514883631,0.952174563544055,0.585400943573396,1.26108115284953,1.10732344824387,0.637819074629948,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0.551873492609465,1.44495530989013,1.40654023910644,0.327869890753351,1.00988370881749,0.631016438832513,0.390438744296638,0.861693590931196,0.238968797952552,0.891194696329576,0.566153061577665,1.61924280669958,0.876767573733936,1.97643888973262,1.60660658210904,0.709700426041343,1.24645922567079,0.81443479676788,1.15479086080775,0,0.971122544619926,0.604647113929502,0.565815239267694,0.295301892880773,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,1.03486947026204,0.643011105094777,1.77340233642274,1.07021290561242,0.987294123612726,0.608929898229199,0.469343416127421,0.21183207086382,0.441056796109924,1.15420377059036,0.968786560175433,1.02531972377865,0.596861720015682,0.656563598980245,0.582961673259701,2.78137953015765,0.170870880797853,0.619160603889667,1.11116716421827,0.376736914009382,0.956859594047176,0.915112692826091,0.679913719975421,1.81936888020755,1.24379976423981,0,0.158167996790568,0.609958401380546,0.540026704109006,0.836353184057875,0.436725127492355,0.404593039154462,0.743881101528023,0,0,0,0.56369293868419,1.04661582230785,0.330916980914195,1.36115831840833,1.03327858782185,1.01373675294467,0.469428954583016,1.43224823328345,3.77493639932559,2.89900944991207,2.01621004380506,0.632022241256357,0.608175645870493,0.821687657318618,0.909445760844565,0.537080087002444,1.19208812868759,0.841368146639782,0.738447635872886,0.908698049533329,0.609654453239999,0.604957110821043,1.07203668813728,0.577271049841977,1.63627663054197,0.680191150845634,0.221985953374065,0.807424709485281,0.335769232728157,0,0.563047426353546,0.73260649706906,0.214368379079066,1.00314420807073,4.51801474093653,4.60325236507177,4.01026859407578,3.26521046453006,2.05524755931193,0.755393897389701,2.02506750069542,3.60256962579376,0.453142408984205,1.03552062350364,1.3492355185943,1.19707462020309,1.19513524027894,0.486213434136588,1.46729213839588,1.10306105070008,0.222246727801615,0.206035057238894,0.64183841918363,2.27427490587418,1.01391719956096,0.943131706930381,0.655490552289177,0.960377286073039,0.689225627467359,0.476293691283074,0.695305955669133,0.77163688185482,1.23625770240992,1.17759136107518,1.02860775715625,1.59728225543404,0.715308569841963,0.726732083161643,0.846984423737976,1.52306294205018,0,1.05227884575137,0.679020569229309,1.68342681497322,0.474540072496697,0.591026894253381,0.818462086339379,0.77468420592983,0.964533054905707,0.499621155875892,1.87145286756327,0.214871054048298,1.14772999241306,0.441182838239031,0.463735671240843
|short_description=p4@Zc3h13
}}

Revision as of 03:06, 13 September 2013

Short description:p4@Zc3h13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Zc3h13_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 10bp_to_ENSMUST00000165404_5end
EntrezGene:Zc3h13
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Zc3h13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D93.77
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.88e-0723
neuroblast (sensu Vertebrata)6.88e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.05e-1154
neural tube1.05e-1152
neural rod1.05e-1152
future spinal cord1.05e-1152
neural keel1.05e-1152
gray matter1.15e-1134
central nervous system4.22e-1173
nervous system2.11e-1075
brain grey matter1.22e-0929
regional part of telencephalon1.22e-0929
telencephalon1.22e-0929
brain1.40e-0947
future brain1.40e-0947
neurectoderm1.46e-0964
neural plate1.46e-0964
presumptive neural plate1.46e-0964
anterior neural tube3.42e-0940
regional part of brain4.07e-0946
regional part of forebrain5.32e-0939
forebrain5.32e-0939
future forebrain5.32e-0939
ecto-epithelium1.65e-0873
ectoderm-derived structure1.77e-0895
ectoderm1.77e-0895
presumptive ectoderm1.77e-0895
pre-chordal neural plate3.57e-0849
cerebral cortex8.27e-0721
cerebral hemisphere8.27e-0721
pallium8.27e-0721







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