FFCP PHASE1:Mm9::chr16:65818898..65818904,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1636|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:65818898..65818904,+|id=chr16:65818898..65818904,+|ontology_enrichment_celltype=CL:0000107!2.30e-11!9;CL:0000680!4.46e-11!6;CL:0000183!4.46e-11!6;CL:0000187!4.46e-11!6;CL:0000056!4.46e-11!6;CL:0000055!8.65e-11!50;CL:0000222!2.49e-09!7;CL:0002321!7.37e-09!70;CL:0000220!7.37e-09!70;CL:0000393!1.23e-08!39;CL:0000211!1.23e-08!39;CL:0000548!1.86e-07!115;CL:0000004!1.86e-07!115;CL:0000255!1.86e-07!115;CL:0002371!4.69e-07!118;CL:0000355!5.26e-07!9|ontology_enrichment_celltype_v019_2=CL:0000680,4.95e-25,6;CL:0000187,4.95e-25,6;CL:0000056,4.95e-25,6;CL:0000222,1.83e-21,7;CL:0002293,3.93e-19,3;CL:0000192,7.84e-19,3;CL:0000359,7.84e-19,3;CL:0002539,7.84e-19,3;CL:0000514,7.84e-19,3;CL:0000355,1.07e-16,9;CL:0000393,2.86e-11,39;CL:0000211,2.86e-11,39;CL:0002321,7.63e-11,70;CL:0000107,1.64e-10,9;CL:0002494,7.10e-09,3;CL:0000737,7.10e-09,3;CL:0000746,7.10e-09,3;CL:0000513,7.10e-09,3;CL:0000723,8.46e-08,91;CL:0000048,8.46e-08,91;CL:0000034,3.22e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!9.58e-14!11;UBERON:0002410!2.30e-11!9;UBERON:0001134!5.26e-07!9;UBERON:0002036!5.26e-07!9;UBERON:0002385!5.26e-07!9;UBERON:0000486!5.26e-07!9;UBERON:0001015!5.26e-07!9;UBERON:0004290!5.26e-07!9;UBERON:0003082!5.26e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001135,7.84e-19,3;UBERON:0004237,7.84e-19,3;UBERON:0004695,7.84e-19,3;UBERON:0002111,7.84e-19,3;UBERON:0004178,7.84e-19,3;UBERON:0001134,1.07e-16,9;UBERON:0002036,1.07e-16,9;UBERON:0002385,1.07e-16,9;UBERON:0000486,1.07e-16,9;UBERON:0007503,1.07e-16,9;UBERON:0001015,1.07e-16,9;UBERON:0002329,1.07e-16,9;UBERON:0003082,1.07e-16,9;UBERON:0003059,1.07e-16,9;UBERON:0007282,1.07e-16,9;UBERON:0004290,1.07e-16,9;UBERON:0009618,1.07e-16,9;UBERON:0000383,5.03e-15,10;UBERON:0000947,2.80e-14,4;UBERON:0001637,2.80e-14,4;UBERON:0004573,2.80e-14,4;UBERON:0003509,2.80e-14,4;UBERON:0004571,2.80e-14,4;UBERON:0010191,2.80e-14,4;UBERON:0004572,2.80e-14,4;UBERON:0007524,1.18e-13,11;UBERON:0003077,1.18e-13,11;UBERON:0007285,1.18e-13,11;UBERON:0000055,1.54e-11,5;UBERON:0007500,1.54e-11,5;UBERON:0001981,1.54e-11,5;UBERON:0002049,1.54e-11,5;UBERON:0007798,1.54e-11,5;UBERON:0004537,1.54e-11,5;UBERON:0006965,1.54e-11,5;UBERON:0002410,1.64e-10,9;UBERON:0000013,1.02e-08,3;UBERON:0000010,1.22e-08,11;UBERON:0000011,1.58e-08,3|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77690453926732,6.2853697356099,3.67093504323363,0,0.218025156380447,0.439372365468944,0.777719596297134,0,0,0,0,0,1.02903774414379,0.85960031981627,7.73508138416164,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.763991238884051,0,0.284743361598206,0,0.151452386666368,0.529000920747499,0,0,0,0,0,0,0,1.02258193546835,2.33807404142582,1.41335829804136,0,5.13305909657271,5.09610479413291,7.11066703153331,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0.94652465824877,0.390438744296638,0.430846795465598,1.43381278771531,1.33679204449436,0.283076530788832,2.02405350837447,1.75353514746787,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.192075457214608,0,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:65818898..65818904,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1636 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:65818898..65818904,+ | |||
|id=chr16:65818898..65818904,+ | |||
|ontology_enrichment_celltype=CL:0000107!2.30e-11!9;CL:0000680!4.46e-11!6;CL:0000183!4.46e-11!6;CL:0000187!4.46e-11!6;CL:0000056!4.46e-11!6;CL:0000055!8.65e-11!50;CL:0000222!2.49e-09!7;CL:0002321!7.37e-09!70;CL:0000220!7.37e-09!70;CL:0000393!1.23e-08!39;CL:0000211!1.23e-08!39;CL:0000548!1.86e-07!115;CL:0000004!1.86e-07!115;CL:0000255!1.86e-07!115;CL:0002371!4.69e-07!118;CL:0000355!5.26e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.95e-25,6;CL:0000187,4.95e-25,6;CL:0000056,4.95e-25,6;CL:0000222,1.83e-21,7;CL:0002293,3.93e-19,3;CL:0000192,7.84e-19,3;CL:0000359,7.84e-19,3;CL:0002539,7.84e-19,3;CL:0000514,7.84e-19,3;CL:0000355,1.07e-16,9;CL:0000393,2.86e-11,39;CL:0000211,2.86e-11,39;CL:0002321,7.63e-11,70;CL:0000107,1.64e-10,9;CL:0002494,7.10e-09,3;CL:0000737,7.10e-09,3;CL:0000746,7.10e-09,3;CL:0000513,7.10e-09,3;CL:0000723,8.46e-08,91;CL:0000048,8.46e-08,91;CL:0000034,3.22e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!9.58e-14!11;UBERON:0002410!2.30e-11!9;UBERON:0001134!5.26e-07!9;UBERON:0002036!5.26e-07!9;UBERON:0002385!5.26e-07!9;UBERON:0000486!5.26e-07!9;UBERON:0001015!5.26e-07!9;UBERON:0004290!5.26e-07!9;UBERON:0003082!5.26e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,7.84e-19,3;UBERON:0004237,7.84e-19,3;UBERON:0004695,7.84e-19,3;UBERON:0002111,7.84e-19,3;UBERON:0004178,7.84e-19,3;UBERON:0001134,1.07e-16,9;UBERON:0002036,1.07e-16,9;UBERON:0002385,1.07e-16,9;UBERON:0000486,1.07e-16,9;UBERON:0007503,1.07e-16,9;UBERON:0001015,1.07e-16,9;UBERON:0002329,1.07e-16,9;UBERON:0003082,1.07e-16,9;UBERON:0003059,1.07e-16,9;UBERON:0007282,1.07e-16,9;UBERON:0004290,1.07e-16,9;UBERON:0009618,1.07e-16,9;UBERON:0000383,5.03e-15,10;UBERON:0000947,2.80e-14,4;UBERON:0001637,2.80e-14,4;UBERON:0004573,2.80e-14,4;UBERON:0003509,2.80e-14,4;UBERON:0004571,2.80e-14,4;UBERON:0010191,2.80e-14,4;UBERON:0004572,2.80e-14,4;UBERON:0007524,1.18e-13,11;UBERON:0003077,1.18e-13,11;UBERON:0007285,1.18e-13,11;UBERON:0000055,1.54e-11,5;UBERON:0007500,1.54e-11,5;UBERON:0001981,1.54e-11,5;UBERON:0002049,1.54e-11,5;UBERON:0007798,1.54e-11,5;UBERON:0004537,1.54e-11,5;UBERON:0006965,1.54e-11,5;UBERON:0002410,1.64e-10,9;UBERON:0000013,1.02e-08,3;UBERON:0000010,1.22e-08,11;UBERON:0000011,1.58e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77690453926732,6.2853697356099,3.67093504323363,0,0.218025156380447,0.439372365468944,0.777719596297134,0,0,0,0,0,1.02903774414379,0.85960031981627,7.73508138416164,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.763991238884051,0,0.284743361598206,0,0.151452386666368,0.529000920747499,0,0,0,0,0,0,0,1.02258193546835,2.33807404142582,1.41335829804136,0,5.13305909657271,5.09610479413291,7.11066703153331,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0.94652465824877,0.390438744296638,0.430846795465598,1.43381278771531,1.33679204449436,0.283076530788832,2.02405350837447,1.75353514746787,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.192075457214608,0,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:65818898..65818904,+ | |||
}} |
Revision as of 13:01, 13 September 2013
Short description: | p@chr16:65818898..65818904, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:65818898..65818904, + |
Coexpression cluster: | MCL_coexpression_mm9:1636 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.95e-25 | 6 |
muscle cell | 4.95e-25 | 6 |
myoblast | 4.95e-25 | 6 |
mesodermal cell | 1.83e-21 | 7 |
epithelial cell of thymus | 3.93e-19 | 3 |
smooth muscle cell | 7.84e-19 | 3 |
vascular associated smooth muscle cell | 7.84e-19 | 3 |
aortic smooth muscle cell | 7.84e-19 | 3 |
smooth muscle myoblast | 7.84e-19 | 3 |
multi-potent skeletal muscle stem cell | 1.07e-16 | 9 |
electrically responsive cell | 2.86e-11 | 39 |
electrically active cell | 2.86e-11 | 39 |
embryonic cell | 7.63e-11 | 70 |
autonomic neuron | 1.64e-10 | 9 |
cardiocyte | 7.10e-09 | 3 |
striated muscle cell | 7.10e-09 | 3 |
cardiac muscle cell | 7.10e-09 | 3 |
cardiac muscle myoblast | 7.10e-09 | 3 |
somatic stem cell | 8.46e-08 | 91 |
multi fate stem cell | 8.46e-08 | 91 |
stem cell | 3.22e-07 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.