FFCP PHASE1:Hg19::chr5:135399494..135399507,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:135399494..135399507,-|id=chr5:135399494..135399507,-|ontology_enrichment_celltype=CL:0000055!1.19e-21!180;CL:0000680!1.86e-19!57;CL:0000056!1.86e-19!57;CL:0000355!1.86e-19!57;CL:0000187!5.83e-17!54;CL:0000393!7.53e-15!60;CL:0000211!7.53e-15!60;CL:0000183!1.81e-14!59;CL:0002371!4.86e-14!591;CL:0000048!4.95e-14!430;CL:0000192!8.60e-14!42;CL:0000514!8.60e-14!42;CL:0000723!1.11e-13!436;CL:0000034!1.01e-12!444;CL:0000359!3.73e-12!32;CL:0000144!2.23e-11!625;CL:0000548!9.60e-10!679;CL:0000004!9.60e-10!679;CL:0000255!9.60e-10!679;CL:0000012!1.81e-09!682;CL:0000057!2.87e-09!75;CL:0002334!4.30e-09!12|ontology_enrichment_celltype_v019=CL:0000359;7.61e-22;32!CL:0002595;4.22e-14;5!CL:0000192;1.08e-12;43!CL:0000187;6.28e-11;55!CL:0002539;2.15e-10;10!CL:0002592;1.08e-09;3!CL:0000393;1.04e-07;61!CL:0000211;1.04e-07;61!CL:0002617;5.55e-07;2|ontology_enrichment_celltype_v019_2=CL:0000359,2.76e-22,32;CL:0000680,7.00e-21,58;CL:0000056,7.00e-21,58;CL:0000355,7.00e-21,58;CL:0000187,5.07e-18,55;CL:0000192,2.00e-17,43;CL:0000514,2.00e-17,43;CL:0000393,1.02e-15,61;CL:0000211,1.02e-15,61;CL:0002595,1.24e-13,5;CL:0002539,1.42e-10,10;CL:0002592,1.03e-09,3;CL:0000048,6.39e-09,427;CL:0000222,7.87e-09,121;CL:0000723,1.27e-08,433;CL:0000034,3.10e-08,441;CL:0002617,5.76e-07,2|ontology_enrichment_development_v019=CL:0000514;1.08e-12;43!CL:0000355;1.22e-10;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001134!1.81e-18!61;UBERON:0002036!1.81e-18!61;UBERON:0003082!1.81e-18!61;UBERON:0002385!1.97e-17!63;UBERON:0001015!1.97e-17!63;UBERON:0000383!1.97e-17!63;UBERON:0000486!2.65e-17!82;UBERON:0000914!3.38e-16!83;UBERON:0002329!3.38e-16!83;UBERON:0003077!3.38e-16!83;UBERON:0003059!3.38e-16!83;UBERON:0007282!3.38e-16!83;UBERON:0009618!3.38e-16!83;UBERON:0007285!3.38e-16!83;UBERON:0004290!4.07e-16!70;UBERON:0002204!1.51e-15!167;UBERON:0004573!7.19e-10!33;UBERON:0004571!7.19e-10!33;UBERON:0001637!3.73e-09!42;UBERON:0003509!3.73e-09!42;UBERON:0004572!3.73e-09!42;UBERON:0005256!4.72e-09!143;UBERON:0000490!2.78e-08!138;UBERON:0002100!1.66e-07!216|ontology_enrichment_uberon_v019=UBERON:0004573;4.04e-15;33!UBERON:0004571;4.04e-15;33!UBERON:0003834;4.22e-14;5!UBERON:0001533;4.22e-14;5!UBERON:0002385;4.03e-11;31!UBERON:0001015;4.03e-11;31!UBERON:0000383;4.03e-11;31!UBERON:0001637;1.42e-10;42!UBERON:0003509;1.42e-10;42!UBERON:0004572;1.42e-10;42!UBERON:0004237;2.15e-10;10!UBERON:0004695;2.15e-10;10!UBERON:0002111;2.15e-10;10!UBERON:0004178;2.15e-10;10!UBERON:0003513;5.47e-10;7!UBERON:0003498;1.08e-09;3!UBERON:0005985;1.08e-09;3!UBERON:0001621;1.08e-09;3!UBERON:0001135;6.85e-09;15!UBERON:0004457;2.01e-08;9!UBERON:0000042;2.01e-08;9!UBERON:0005406;7.67e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.84e-19,62;UBERON:0002036,3.84e-19,62;UBERON:0003082,3.84e-19,62;UBERON:0002385,2.35e-18,64;UBERON:0001015,2.35e-18,64;UBERON:0000383,2.35e-18,64;UBERON:0000486,3.07e-17,83;UBERON:0004573,1.99e-16,33;UBERON:0004571,1.99e-16,33;UBERON:0002329,5.89e-16,71;UBERON:0003059,5.89e-16,71;UBERON:0007282,5.89e-16,71;UBERON:0004290,5.89e-16,71;UBERON:0009618,5.89e-16,71;UBERON:0001637,6.00e-16,42;UBERON:0003509,6.00e-16,42;UBERON:0004572,6.00e-16,42;UBERON:0003077,1.19e-15,72;UBERON:0007285,1.19e-15,72;UBERON:0007524,2.34e-15,73;UBERON:0007503,5.37e-14,78;UBERON:0003834,1.24e-13,5;UBERON:0001533,1.24e-13,5;UBERON:0002204,2.23e-12,167;UBERON:0004237,1.42e-10,10;UBERON:0004695,1.42e-10,10;UBERON:0002111,1.42e-10,10;UBERON:0004178,1.42e-10,10;UBERON:0007500,3.66e-10,59;UBERON:0001981,3.66e-10,59;UBERON:0004537,3.66e-10,59;UBERON:0006965,3.66e-10,59;UBERON:0001621,1.03e-09,3;UBERON:0003513,1.16e-09,7;UBERON:0004872,4.03e-09,83;UBERON:0001135,6.31e-09,15;UBERON:0000055,2.67e-08,68;UBERON:0005406,7.13e-08,2;UBERON:0005256,8.28e-08,122;UBERON:0002049,1.11e-07,78;UBERON:0007798,1.11e-07,78|phase1_expression=2.90685406832891,1.2846031433459,0.422863212287913,2.00146596706261,3.12872766099101,6.97870819280295,0,0,0,0.491467873003018,0,0,0.791300934685361,0.866364470720326,1.65698687863958,1.34465029290355,1.80808358407193,5.84248072309899,1.46379839637152,0,0.408001382488506,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0.236482229888585,0,0,0,0.941211697713023,0,1.57306439111559,0.612167784741805,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0.502497330513487,0,0.434377689410233,1.21079900526674,0,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0.50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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:135399494..135399507,- | |||
|id=chr5:135399494..135399507,- | |||
|ontology_enrichment_celltype=CL:0000055!1.19e-21!180;CL:0000680!1.86e-19!57;CL:0000056!1.86e-19!57;CL:0000355!1.86e-19!57;CL:0000187!5.83e-17!54;CL:0000393!7.53e-15!60;CL:0000211!7.53e-15!60;CL:0000183!1.81e-14!59;CL:0002371!4.86e-14!591;CL:0000048!4.95e-14!430;CL:0000192!8.60e-14!42;CL:0000514!8.60e-14!42;CL:0000723!1.11e-13!436;CL:0000034!1.01e-12!444;CL:0000359!3.73e-12!32;CL:0000144!2.23e-11!625;CL:0000548!9.60e-10!679;CL:0000004!9.60e-10!679;CL:0000255!9.60e-10!679;CL:0000012!1.81e-09!682;CL:0000057!2.87e-09!75;CL:0002334!4.30e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.61e-22;32!CL:0002595;4.22e-14;5!CL:0000192;1.08e-12;43!CL:0000187;6.28e-11;55!CL:0002539;2.15e-10;10!CL:0002592;1.08e-09;3!CL:0000393;1.04e-07;61!CL:0000211;1.04e-07;61!CL:0002617;5.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.76e-22,32;CL:0000680,7.00e-21,58;CL:0000056,7.00e-21,58;CL:0000355,7.00e-21,58;CL:0000187,5.07e-18,55;CL:0000192,2.00e-17,43;CL:0000514,2.00e-17,43;CL:0000393,1.02e-15,61;CL:0000211,1.02e-15,61;CL:0002595,1.24e-13,5;CL:0002539,1.42e-10,10;CL:0002592,1.03e-09,3;CL:0000048,6.39e-09,427;CL:0000222,7.87e-09,121;CL:0000723,1.27e-08,433;CL:0000034,3.10e-08,441;CL:0002617,5.76e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;1.08e-12;43!CL:0000355;1.22e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.81e-18!61;UBERON:0002036!1.81e-18!61;UBERON:0003082!1.81e-18!61;UBERON:0002385!1.97e-17!63;UBERON:0001015!1.97e-17!63;UBERON:0000383!1.97e-17!63;UBERON:0000486!2.65e-17!82;UBERON:0000914!3.38e-16!83;UBERON:0002329!3.38e-16!83;UBERON:0003077!3.38e-16!83;UBERON:0003059!3.38e-16!83;UBERON:0007282!3.38e-16!83;UBERON:0009618!3.38e-16!83;UBERON:0007285!3.38e-16!83;UBERON:0004290!4.07e-16!70;UBERON:0002204!1.51e-15!167;UBERON:0004573!7.19e-10!33;UBERON:0004571!7.19e-10!33;UBERON:0001637!3.73e-09!42;UBERON:0003509!3.73e-09!42;UBERON:0004572!3.73e-09!42;UBERON:0005256!4.72e-09!143;UBERON:0000490!2.78e-08!138;UBERON:0002100!1.66e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.04e-15;33!UBERON:0004571;4.04e-15;33!UBERON:0003834;4.22e-14;5!UBERON:0001533;4.22e-14;5!UBERON:0002385;4.03e-11;31!UBERON:0001015;4.03e-11;31!UBERON:0000383;4.03e-11;31!UBERON:0001637;1.42e-10;42!UBERON:0003509;1.42e-10;42!UBERON:0004572;1.42e-10;42!UBERON:0004237;2.15e-10;10!UBERON:0004695;2.15e-10;10!UBERON:0002111;2.15e-10;10!UBERON:0004178;2.15e-10;10!UBERON:0003513;5.47e-10;7!UBERON:0003498;1.08e-09;3!UBERON:0005985;1.08e-09;3!UBERON:0001621;1.08e-09;3!UBERON:0001135;6.85e-09;15!UBERON:0004457;2.01e-08;9!UBERON:0000042;2.01e-08;9!UBERON:0005406;7.67e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.84e-19,62;UBERON:0002036,3.84e-19,62;UBERON:0003082,3.84e-19,62;UBERON:0002385,2.35e-18,64;UBERON:0001015,2.35e-18,64;UBERON:0000383,2.35e-18,64;UBERON:0000486,3.07e-17,83;UBERON:0004573,1.99e-16,33;UBERON:0004571,1.99e-16,33;UBERON:0002329,5.89e-16,71;UBERON:0003059,5.89e-16,71;UBERON:0007282,5.89e-16,71;UBERON:0004290,5.89e-16,71;UBERON:0009618,5.89e-16,71;UBERON:0001637,6.00e-16,42;UBERON:0003509,6.00e-16,42;UBERON:0004572,6.00e-16,42;UBERON:0003077,1.19e-15,72;UBERON:0007285,1.19e-15,72;UBERON:0007524,2.34e-15,73;UBERON:0007503,5.37e-14,78;UBERON:0003834,1.24e-13,5;UBERON:0001533,1.24e-13,5;UBERON:0002204,2.23e-12,167;UBERON:0004237,1.42e-10,10;UBERON:0004695,1.42e-10,10;UBERON:0002111,1.42e-10,10;UBERON:0004178,1.42e-10,10;UBERON:0007500,3.66e-10,59;UBERON:0001981,3.66e-10,59;UBERON:0004537,3.66e-10,59;UBERON:0006965,3.66e-10,59;UBERON:0001621,1.03e-09,3;UBERON:0003513,1.16e-09,7;UBERON:0004872,4.03e-09,83;UBERON:0001135,6.31e-09,15;UBERON:0000055,2.67e-08,68;UBERON:0005406,7.13e-08,2;UBERON:0005256,8.28e-08,122;UBERON:0002049,1.11e-07,78;UBERON:0007798,1.11e-07,78 | |||
|phase1_expression=2.90685406832891,1.2846031433459,0.422863212287913,2.00146596706261,3.12872766099101,6.97870819280295,0,0,0,0.491467873003018,0,0,0.791300934685361,0.866364470720326,1.65698687863958,1.34465029290355,1.80808358407193,5.84248072309899,1.46379839637152,0,0.408001382488506,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0.236482229888585,0,0,0,0.941211697713023,0,1.57306439111559,0.612167784741805,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0.502497330513487,0,0.434377689410233,1.21079900526674,0,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0.50133791063589,1.30361867064741,0,1.94653948121054,0.567208902984407,1.10864698731282,0.263504357079378,0,0,0,5.8418530857843,1.0447784237956,0.664789802594326,1.43094374583205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0.397227542439656,0,0.354668382198357,0,2.1349799145941,0.98667019366864,0,0.269421344139376,1.14423332179421,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,1.22595118319608,1.05166641234618,0.453728732640084,0.358779271377724,0.427114777637135,0,0.600182192168805,0.103052529238439,0.515281080091258,0.18611685633159,2.86919764810153,0.194874010322397,0.252433774244115,0.184099797284599,0,0,0.806016785821122,0.169560592310488,0.386521706326594,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,1.47730203652438,0,0.445893486866185,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0.845302752556,0,0,0,0,0,0.57191197463259,0,0,3.90883421152482,1.77695974371273,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,3.61953266668948,2.67119219315498,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,2.70362119990049,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,3.94065842880137,0,0.30239029332968,0.992431231275107,1.53461973288062,3.64858122762996,0.640695746278505,0,1.28683136914886,5.93672265779964,0.154209693802656,0.355123450626254,0.164254312027618,0.519254429183621,2.67283870457906,0,0,0,0.574072240823034,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84858340537573,3.22357716924872,1.24052915236078,0.859361958946189,0.435050081742686,0.426133137080504,0.534192213880424,0.165284915360978,0,0.510450849978337,0.10115778085555,0,0,2.7881490806424,0.308033580176089,0,2.60979897622522,0.55597265731176,0.429374660225974,0.744316738719335,0,0.190630193923825,0,0,0,1.56989728039846,0.899362287916574,1.09814811894422,0.353437207037059,1.2130948894399,1.58510321173008,5.89761838734574,0,1.46228093778771,1.05650146756755,0,0.848432591722276,0,1.10273068709225,1.32687795048244,1.31535265576129,0.578775534266688,0.655894752046633,1.21746226177622,0,2.25356482025793,0,0,0,0,5.69990615303693,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,1.68471475667626,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,1.55519793830904,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.661983911750998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596143835108969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.157566364614447,0.0824158583811665,0,0,0,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0,0,0,0.896436696664224,0.191915197319445,0,0,0,0,6.91377192961014,1.63293680054705,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,1.34329322598187,0.467426619694449,0,0,0,0.889811221596536,0.228840068396924,0,0.310874401165561,0,0,0,0.465788870628778,0.829412415681711,0.53168342911599,0.521745061811734,0.601030435988874,1.52322084867518,0,0.545545977607678,0.214821114084977,0,1.19428766609585,2.00013882331577,0.343395705182793,0.673498977531838,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565909307848,0.491545817507439,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,1.21023041222112,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,1.6992711468781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| |||
|short_description=p@chr5:135399494..135399507,- | |||
}} |
Revision as of 13:20, 13 September 2013
Short description: | p@chr5:135399494..135399507, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135399494..135399507, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.76e-22 | 32 |
muscle precursor cell | 7.00e-21 | 58 |
myoblast | 7.00e-21 | 58 |
multi-potent skeletal muscle stem cell | 7.00e-21 | 58 |
muscle cell | 5.07e-18 | 55 |
smooth muscle cell | 2.00e-17 | 43 |
smooth muscle myoblast | 2.00e-17 | 43 |
electrically responsive cell | 1.02e-15 | 61 |
electrically active cell | 1.02e-15 | 61 |
smooth muscle cell of the subclavian artery | 1.24e-13 | 5 |
aortic smooth muscle cell | 1.42e-10 | 10 |
smooth muscle cell of the coronary artery | 1.03e-09 | 3 |
multi fate stem cell | 6.39e-09 | 427 |
mesodermal cell | 7.87e-09 | 121 |
somatic stem cell | 1.27e-08 | 433 |
stem cell | 3.10e-08 | 441 |
adipocyte of breast | 5.76e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.