FFCP PHASE1:Mm9::chr17:32967140..32967197,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=240064|HGNC=|MCL_coexpression_id=399|UniProt=F6SC80,Q8BHK4|association_with_transcript=0bp_to_NM_177359,uc008bxo.1_5end|description=CAGE_peak_1_at_Zfp799_5end|id=chr17:32967140..32967197,-|ontology_enrichment_celltype=CL:0000540!7.45e-11!33;CL:0000047!7.45e-11!33;CL:0000031!7.45e-11!33;CL:0000404!7.45e-11!33;CL:0000393!7.46e-09!39;CL:0000211!7.46e-09!39;CL:0000117!2.96e-08!23;CL:0000337!2.96e-08!23|ontology_enrichment_celltype_v019_2=CL:0000540,7.45e-11,33;CL:0000047,7.45e-11,33;CL:0000031,7.45e-11,33;CL:0000404,7.45e-11,33;CL:0000393,7.46e-09,39;CL:0000211,7.46e-09,39;CL:0000117,2.96e-08,23;CL:0000337,2.96e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!7.91e-22!94;UBERON:0000033!1.08e-20!63;UBERON:0003056!6.50e-19!49;UBERON:0001017!9.70e-19!73;UBERON:0005743!9.70e-19!73;UBERON:0000955!4.84e-18!50;UBERON:0006238!4.84e-18!50;UBERON:0007811!9.91e-18!86;UBERON:0002346!1.25e-17!71;UBERON:0003075!1.25e-17!71;UBERON:0007284!1.25e-17!71;UBERON:0002616!2.46e-17!49;UBERON:0000073!2.54e-17!75;UBERON:0001016!2.54e-17!75;UBERON:0004121!1.26e-16!102;UBERON:0000924!1.26e-16!102;UBERON:0006601!1.26e-16!102;UBERON:0001049!1.46e-16!52;UBERON:0005068!1.46e-16!52;UBERON:0006241!1.46e-16!52;UBERON:0007135!1.46e-16!52;UBERON:0003080!5.01e-16!40;UBERON:0002780!2.01e-15!39;UBERON:0001890!2.01e-15!39;UBERON:0006240!2.01e-15!39;UBERON:0002020!1.03e-11!34;UBERON:0002791!1.09e-11!29;UBERON:0003528!1.09e-11!29;UBERON:0001893!1.09e-11!29;UBERON:0000468!2.99e-09!333;UBERON:0000956!9.89e-09!21;UBERON:0001869!9.89e-09!21;UBERON:0000203!9.89e-09!21;UBERON:0000922!3.57e-08!328;UBERON:0000475!4.09e-08!200|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.80e-20,64;UBERON:0003075,4.80e-20,64;UBERON:0007284,4.80e-20,64;UBERON:0010371,1.83e-19,73;UBERON:0003056,6.50e-19,49;UBERON:0001017,9.40e-19,73;UBERON:0004121,3.17e-18,95;UBERON:0000924,3.17e-18,95;UBERON:0006601,3.17e-18,95;UBERON:0000073,1.58e-17,54;UBERON:0001016,2.47e-17,75;UBERON:0000955,1.15e-16,47;UBERON:0006238,1.15e-16,47;UBERON:0001049,1.46e-16,52;UBERON:0005068,1.46e-16,52;UBERON:0006241,1.46e-16,52;UBERON:0007135,1.46e-16,52;UBERON:0003080,5.01e-16,40;UBERON:0002616,5.69e-16,46;UBERON:0002780,2.01e-15,39;UBERON:0001890,2.01e-15,39;UBERON:0006240,2.01e-15,39;UBERON:0010314,7.79e-14,92;UBERON:0002020,1.03e-11,34;UBERON:0003528,1.09e-11,29;UBERON:0002791,1.09e-11,29;UBERON:0001893,1.09e-11,29;UBERON:0000956,9.88e-09,21;UBERON:0001869,9.88e-09,21;UBERON:0000203,9.88e-09,21;UBERON:0000922,1.29e-07,320|phase1_expression=21.1396478178328,2.79180326111489,5.0049916332849,5.74682001482977,6.51164448930251,7.55456723603504,5.84031601488814,14.0744422551318,1.97104211012333,2.57470978954193,3.5955773327356,4.22792442675283,17.8048759128454,12.1514359362406,2.33176833270964,3.64455481301687,2.09868563438444,8.51747846467242,10.2835825204304,10.6097412949508,11.0556277196391,6.45391182805754,6.00759515019551,8.79958325363737,7.11168771308227,2.8711598205751,5.59990595006797,5.817723282519,7.03086651988583,6.80481350351813,4.43461021310609,8.89042942843484,3.07532393792285,0,17.3310971850765,8.47796691328311,12.6585000882669,0.418531630736908,0.7813353445238,1.57057123192139,0,0,0.971020706062307,17.4996576986052,12.5707394712198,11.0128051297009,4.69434806608824,4.14247797122848,1.97717564461025,5.63846707315422,3.63964696225943,0,0.838913030288682,7.25362142011344,6.04968838456435,7.20326420900652,6.87680255853016,6.18806510732931,21.647861311977,20.6306481916093,13.3104594736298,5.42151251310611,2.66788438833342,3.1496490104849,1.97773272513395,0.7104801149461,1.19840044207362,4.2264013585371,27.5814368740551,23.4910332697142,22.0841209418951,7.9982275633065,12.3686382932904,26.0905402327852,22.8112221023403,22.0612508786405,22.0231761998777,22.0899094887375,18.7399970572617,21.3655786122914,28.818607734759,25.0038417867245,15.9134309430787,12.380777420697,22.0029476798607,15.0260578591571,20.786265396669,21.2495368240843,4.01348824665875,6.72586884950391,13.3337664802772,4.30211938490693,0.679971333707751,4.31762553310254,11.0461990966104,5.37632264516803,6.74133216632409,14.657007741713,11.4305842025262,7.0667914902068,17.7462708918617,21.815501160434,20.3844191765317,14.2213340630666,1.94841936910093,3.54703811665138,5.05524445014783,7.9928715803342,15.7952109024775,11.7269289861212,10.9295755862666,9.13396434936424,9.68585088475446,11.4549206819993,9.52468527799209,9.29932775839599,1.97755974187499,7.08536848907567,2.65383165584962,7.44127509758082,6.18356251689102,6.30337829075789,7.45567044872489,29.5708604981663,24.5052646971742,6.64188343542338,4.19352935770721,2.99951365496704,3.68503658511888,25.7639899776295,34.312545211397,20.1046963380583,29.2024857923024,17.1329356411321,21.4021685896347,20.4423991465375,14.9703864859965,11.6942552373487,16.9324248150562,21.6755111563068,26.5445703643916,14.4838325793088,23.2280147448901,16.7282347797644,17.6894897793452,21.0106501267154,14.4300655821982,18.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| ||
|EntrezGene=240064 | |||
|HGNC= | |||
|MCL_coexpression_id=399 | |||
|UniProt=F6SC80,Q8BHK4 | |||
|association_with_transcript=0bp_to_NM_177359,uc008bxo.1_5end | |||
|description=CAGE_peak_1_at_Zfp799_5end | |||
|id=chr17:32967140..32967197,- | |||
|ontology_enrichment_celltype=CL:0000540!7.45e-11!33;CL:0000047!7.45e-11!33;CL:0000031!7.45e-11!33;CL:0000404!7.45e-11!33;CL:0000393!7.46e-09!39;CL:0000211!7.46e-09!39;CL:0000117!2.96e-08!23;CL:0000337!2.96e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.45e-11,33;CL:0000047,7.45e-11,33;CL:0000031,7.45e-11,33;CL:0000404,7.45e-11,33;CL:0000393,7.46e-09,39;CL:0000211,7.46e-09,39;CL:0000117,2.96e-08,23;CL:0000337,2.96e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!7.91e-22!94;UBERON:0000033!1.08e-20!63;UBERON:0003056!6.50e-19!49;UBERON:0001017!9.70e-19!73;UBERON:0005743!9.70e-19!73;UBERON:0000955!4.84e-18!50;UBERON:0006238!4.84e-18!50;UBERON:0007811!9.91e-18!86;UBERON:0002346!1.25e-17!71;UBERON:0003075!1.25e-17!71;UBERON:0007284!1.25e-17!71;UBERON:0002616!2.46e-17!49;UBERON:0000073!2.54e-17!75;UBERON:0001016!2.54e-17!75;UBERON:0004121!1.26e-16!102;UBERON:0000924!1.26e-16!102;UBERON:0006601!1.26e-16!102;UBERON:0001049!1.46e-16!52;UBERON:0005068!1.46e-16!52;UBERON:0006241!1.46e-16!52;UBERON:0007135!1.46e-16!52;UBERON:0003080!5.01e-16!40;UBERON:0002780!2.01e-15!39;UBERON:0001890!2.01e-15!39;UBERON:0006240!2.01e-15!39;UBERON:0002020!1.03e-11!34;UBERON:0002791!1.09e-11!29;UBERON:0003528!1.09e-11!29;UBERON:0001893!1.09e-11!29;UBERON:0000468!2.99e-09!333;UBERON:0000956!9.89e-09!21;UBERON:0001869!9.89e-09!21;UBERON:0000203!9.89e-09!21;UBERON:0000922!3.57e-08!328;UBERON:0000475!4.09e-08!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.80e-20,64;UBERON:0003075,4.80e-20,64;UBERON:0007284,4.80e-20,64;UBERON:0010371,1.83e-19,73;UBERON:0003056,6.50e-19,49;UBERON:0001017,9.40e-19,73;UBERON:0004121,3.17e-18,95;UBERON:0000924,3.17e-18,95;UBERON:0006601,3.17e-18,95;UBERON:0000073,1.58e-17,54;UBERON:0001016,2.47e-17,75;UBERON:0000955,1.15e-16,47;UBERON:0006238,1.15e-16,47;UBERON:0001049,1.46e-16,52;UBERON:0005068,1.46e-16,52;UBERON:0006241,1.46e-16,52;UBERON:0007135,1.46e-16,52;UBERON:0003080,5.01e-16,40;UBERON:0002616,5.69e-16,46;UBERON:0002780,2.01e-15,39;UBERON:0001890,2.01e-15,39;UBERON:0006240,2.01e-15,39;UBERON:0010314,7.79e-14,92;UBERON:0002020,1.03e-11,34;UBERON:0003528,1.09e-11,29;UBERON:0002791,1.09e-11,29;UBERON:0001893,1.09e-11,29;UBERON:0000956,9.88e-09,21;UBERON:0001869,9.88e-09,21;UBERON:0000203,9.88e-09,21;UBERON:0000922,1.29e-07,320 | |||
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| |||
|short_description=p1@Zfp799 | |||
}} |
Revision as of 14:07, 13 September 2013
Short description: | p1@Zfp799 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp799_5end |
Coexpression cluster: | MCL_coexpression_mm9:399 |
Association with transcript: | 0bp_to_NM_177359, uc008bxo.1_5end |
EntrezGene: | Zfp799 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.45e-11 | 33 |
neuronal stem cell | 7.45e-11 | 33 |
neuroblast | 7.45e-11 | 33 |
electrically signaling cell | 7.45e-11 | 33 |
electrically responsive cell | 7.46e-09 | 39 |
electrically active cell | 7.46e-09 | 39 |
CNS neuron (sensu Vertebrata) | 2.96e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.96e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.80e-20 | 64 |
neural plate | 4.80e-20 | 64 |
presumptive neural plate | 4.80e-20 | 64 |
ecto-epithelium | 1.83e-19 | 73 |
pre-chordal neural plate | 6.50e-19 | 49 |
central nervous system | 9.40e-19 | 73 |
ectoderm-derived structure | 3.17e-18 | 95 |
ectoderm | 3.17e-18 | 95 |
presumptive ectoderm | 3.17e-18 | 95 |
regional part of nervous system | 1.58e-17 | 54 |
nervous system | 2.47e-17 | 75 |
brain | 1.15e-16 | 47 |
future brain | 1.15e-16 | 47 |
neural tube | 1.46e-16 | 52 |
neural rod | 1.46e-16 | 52 |
future spinal cord | 1.46e-16 | 52 |
neural keel | 1.46e-16 | 52 |
anterior neural tube | 5.01e-16 | 40 |
regional part of brain | 5.69e-16 | 46 |
regional part of forebrain | 2.01e-15 | 39 |
forebrain | 2.01e-15 | 39 |
future forebrain | 2.01e-15 | 39 |
structure with developmental contribution from neural crest | 7.79e-14 | 92 |
gray matter | 1.03e-11 | 34 |
brain grey matter | 1.09e-11 | 29 |
regional part of telencephalon | 1.09e-11 | 29 |
telencephalon | 1.09e-11 | 29 |
cerebral cortex | 9.88e-09 | 21 |
cerebral hemisphere | 9.88e-09 | 21 |
pallium | 9.88e-09 | 21 |
embryo | 1.29e-07 | 320 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.