FFCP PHASE1:Hg19::chr5:150029401..150029418,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11346|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=30672|TSSclassifier=W|UniProt=|association_with_transcript=-228bp_to_BC113927_5end|description=CAGE_peak_24_at_SYNPO_5end|id=chr5:150029401..150029418,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002593;5.61e-14;2!CL:0002595;1.66e-12;5!CL:0002138;1.84e-10;6!CL:0002557;1.14e-07;1!CL:0002591;1.14e-07;1!CL:0000115;1.65e-07;36|ontology_enrichment_celltype_v019_2=CL:0002593,8.60e-14,2;CL:0002595,2.15e-12,5;CL:0005020,2.34e-10,6;CL:0002138,2.34e-10,6;CL:0005022,2.34e-10,6;CL:0000115,5.47e-08,36;CL:0002557,1.26e-07,1;CL:0002591,1.35e-07,1|ontology_enrichment_development_v019=CL:0005022;1.84e-10;6!UBERON:0004874;3.80e-08;1!UBERON:0000358;5.33e-08;1!UBERON:0010227;5.33e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000477!5.08e-11!286;UBERON:0007023!4.32e-10!115;UBERON:0001009!5.19e-10!113;UBERON:0004872!5.33e-10!84;UBERON:0004535!3.01e-09!110;UBERON:0002049!4.60e-09!79;UBERON:0007798!4.60e-09!79;UBERON:0007100!8.27e-09!27;UBERON:0004111!1.09e-08!241;UBERON:0000055!5.30e-08!69;UBERON:0000948!7.65e-08!24;UBERON:0005498!7.65e-08!24;UBERON:0004140!7.65e-08!24;UBERON:0009881!7.65e-08!24;UBERON:0004141!7.65e-08!24;UBERON:0003084!7.65e-08!24;UBERON:0007005!7.65e-08!24;UBERON:0004139!7.65e-08!24;UBERON:0004291!7.65e-08!24;UBERON:0003914!2.92e-07!118;UBERON:0000481!3.84e-07!347;UBERON:0001981!9.83e-07!60;UBERON:0007500!9.83e-07!60;UBERON:0004537!9.83e-07!60;UBERON:0006965!9.83e-07!60|ontology_enrichment_uberon_v019=UBERON:0002456;5.61e-14;2!UBERON:0000078;1.19e-13;2!UBERON:0002012;1.19e-13;2!UBERON:0008886;1.19e-13;2!UBERON:0003834;1.66e-12;5!UBERON:0001533;1.66e-12;5!UBERON:0003513;4.53e-09;7!UBERON:0001637;9.55e-09;42!UBERON:0003509;9.55e-09;42!UBERON:0004572;9.55e-09;42!UBERON:0000989;3.80e-08;1!UBERON:0008811;3.80e-08;1!UBERON:0002079;5.33e-08;1!UBERON:0001473;5.83e-08;8!UBERON:0004536;5.83e-08;8!UBERON:0006558;5.83e-08;8!UBERON:0002049;7.03e-08;75!UBERON:0007798;7.03e-08;75!UBERON:0002146;1.14e-07;1!UBERON:0005623;1.14e-07;1!UBERON:0000055;6.85e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0002456,8.60e-14,2;UBERON:0000078,1.54e-13,2;UBERON:0007497,1.54e-13,2;UBERON:0003643,1.54e-13,2;UBERON:0003504,1.54e-13,2;UBERON:0003469,1.54e-13,2;UBERON:0003496,1.54e-13,2;UBERON:0002012,1.54e-13,2;UBERON:0008886,1.54e-13,2;UBERON:0007303,1.54e-13,2;UBERON:0002061,1.54e-13,2;UBERON:0005432,1.54e-13,2;UBERON:0004363,1.54e-13,2;UBERON:0000055,1.63e-13,68;UBERON:0001009,2.71e-13,112;UBERON:0003834,2.15e-12,5;UBERON:0001533,2.15e-12,5;UBERON:0004535,5.60e-12,109;UBERON:0002049,1.83e-11,78;UBERON:0007798,1.83e-11,78;UBERON:0001637,4.90e-11,42;UBERON:0003509,4.90e-11,42;UBERON:0004572,4.90e-11,42;UBERON:0003914,6.00e-11,117;UBERON:0007100,6.03e-11,27;UBERON:0004872,1.16e-10,83;UBERON:0006562,1.74e-09,11;UBERON:0004145,2.51e-09,3;UBERON:0007500,3.25e-09,59;UBERON:0001981,3.25e-09,59;UBERON:0004537,3.25e-09,59;UBERON:0006965,3.25e-09,59;UBERON:0000948,3.56e-09,24;UBERON:0005498,3.56e-09,24;UBERON:0004140,3.56e-09,24;UBERON:0009881,3.56e-09,24;UBERON:0004141,3.56e-09,24;UBERON:0003084,3.56e-09,24;UBERON:0007005,3.56e-09,24;UBERON:0004139,3.56e-09,24;UBERON:0004291,3.56e-09,24;UBERON:0003513,5.42e-09,7;UBERON:0000989,3.55e-08,1;UBERON:0008811,3.55e-08,1;UBERON:0006258,3.55e-08,1;UBERON:0005876,3.55e-08,1;UBERON:0004874,3.55e-08,1;UBERON:0002079,4.66e-08,1;UBERON:0001473,6.97e-08,8;UBERON:0004536,6.97e-08,8;UBERON:0006558,6.97e-08,8;UBERON:0003103,7.84e-08,68;UBERON:0002146,1.11e-07,1;UBERON:0005623,1.11e-07,1;UBERON:0003081,1.23e-07,203;UBERON:0004111,9.31e-07,240|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0.408001382488506,0,0,0,0.125542639594803,0,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.361439152384566,0,0.579386075843295,0,0.486634870302636,0.189069634328136,0.221729397462564,0.263504357079378,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,1.67799774483962,0.550236083880135,0,0,0.35576626268671,0.33472061276467,0,0,0.976248230192678,1.10298924103761,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0,0,0,1.12135520028461,0,5.42668606517752,0,0.538842688278752,0.980771418680752,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0,1.13432183160021,0.717558542755448,0,0.423863802319124,0,0.206105058476878,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.168584690078102,0,0.2205879454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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11346 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30672 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-228bp_to_BC113927_5end | |||
|description=CAGE_peak_24_at_SYNPO_5end | |||
|id=chr5:150029401..150029418,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002593;5.61e-14;2!CL:0002595;1.66e-12;5!CL:0002138;1.84e-10;6!CL:0002557;1.14e-07;1!CL:0002591;1.14e-07;1!CL:0000115;1.65e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,8.60e-14,2;CL:0002595,2.15e-12,5;CL:0005020,2.34e-10,6;CL:0002138,2.34e-10,6;CL:0005022,2.34e-10,6;CL:0000115,5.47e-08,36;CL:0002557,1.26e-07,1;CL:0002591,1.35e-07,1 | |||
|ontology_enrichment_development_v019=CL:0005022;1.84e-10;6!UBERON:0004874;3.80e-08;1!UBERON:0000358;5.33e-08;1!UBERON:0010227;5.33e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002456;5.61e-14;2!UBERON:0000078;1.19e-13;2!UBERON:0002012;1.19e-13;2!UBERON:0008886;1.19e-13;2!UBERON:0003834;1.66e-12;5!UBERON:0001533;1.66e-12;5!UBERON:0003513;4.53e-09;7!UBERON:0001637;9.55e-09;42!UBERON:0003509;9.55e-09;42!UBERON:0004572;9.55e-09;42!UBERON:0000989;3.80e-08;1!UBERON:0008811;3.80e-08;1!UBERON:0002079;5.33e-08;1!UBERON:0001473;5.83e-08;8!UBERON:0004536;5.83e-08;8!UBERON:0006558;5.83e-08;8!UBERON:0002049;7.03e-08;75!UBERON:0007798;7.03e-08;75!UBERON:0002146;1.14e-07;1!UBERON:0005623;1.14e-07;1!UBERON:0000055;6.85e-07;65 | |||
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| |||
|short_description=p24@SYNPO | |||
}} |
Revision as of 14:08, 13 September 2013
Short description: | p24@SYNPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_SYNPO_5end |
Coexpression cluster: | NA |
Association with transcript: | -228bp_to_BC113927_5end |
EntrezGene: | SYNPO |
HGNC: | 30672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 8.60e-14 | 2 |
smooth muscle cell of the subclavian artery | 2.15e-12 | 5 |
lymphangioblast | 2.34e-10 | 6 |
endothelial cell of lymphatic vessel | 2.34e-10 | 6 |
vascular lymphangioblast | 2.34e-10 | 6 |
endothelial cell | 5.47e-08 | 36 |
fibroblast of pulmonary artery | 1.26e-07 | 1 |
smooth muscle cell of the pulmonary artery | 1.35e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.