FFCP PHASE1:Hg19::chr5:156649779..156649791,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3702|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6171|TSSclassifier=S|UniProt=|association_with_transcript=20bp_to_ENST00000519759_5end|description=CAGE_peak_3_at_ITK_5end|id=chr5:156649779..156649791,+|ontology_enrichment_celltype=CL:0000738!4.02e-16!140;CL:0000084!1.62e-15!25;CL:0000827!1.62e-15!25;CL:0002087!4.49e-15!119;CL:0000988!2.09e-13!182;CL:0000080!4.30e-13!6;CL:0002031!4.45e-13!124;CL:0000791!1.03e-12!18;CL:0000789!1.03e-12!18;CL:0002420!1.03e-12!18;CL:0002419!1.03e-12!18;CL:0000790!1.03e-12!18;CL:0000037!1.57e-11!172;CL:0000566!1.57e-11!172;CL:0000838!2.03e-11!52;CL:0000542!3.97e-11!53;CL:0000051!3.97e-11!53;CL:0000623!1.44e-10!3;CL:0000825!1.44e-10!3;CL:0002032!1.53e-10!165;CL:0000837!1.53e-10!165;CL:0000128!1.12e-09!7;CL:0000126!1.12e-09!7;CL:0000127!1.12e-09!7;CL:0002453!1.12e-09!7;CL:0000624!6.13e-09!6;CL:0002057!8.35e-08!42;CL:0000860!4.10e-07!45;CL:0000893!4.45e-07!2;CL:0002489!4.45e-07!2;CL:0000809!4.45e-07!2;CL:0000808!4.45e-07!2;CL:0000894!4.45e-07!2;CL:0000806!4.45e-07!2;CL:0000807!4.45e-07!2;CL:0000805!4.45e-07!2;CL:0002425!4.45e-07!2|ontology_enrichment_celltype_v019=CL:0000791;3.72e-34;18!CL:0000789;3.72e-34;18!CL:0002419;3.72e-34;18!CL:0000084;5.59e-31;25!CL:0000623;3.88e-30;3!CL:0000624;9.52e-27;6!CL:0000625;1.32e-14;11!CL:0000542;1.52e-14;53!CL:0000895;3.11e-11;1|ontology_enrichment_celltype_v019_2=CL:0000791,5.31e-34,18;CL:0000789,5.31e-34,18;CL:0002420,5.31e-34,18;CL:0002419,5.31e-34,18;CL:0000790,5.31e-34,18;CL:0000084,7.46e-31,25;CL:0000827,7.46e-31,25;CL:0000623,1.00e-30,3;CL:0000825,1.00e-30,3;CL:0000624,7.31e-27,6;CL:0000838,1.14e-25,52;CL:0000542,3.75e-25,53;CL:0000051,3.75e-25,53;CL:0002087,1.89e-19,115;CL:0002031,1.51e-18,120;CL:0000988,1.30e-17,177;CL:0000738,4.21e-16,136;CL:0000625,2.02e-14,11;CL:0002032,3.06e-13,161;CL:0000837,3.06e-13,161;CL:0000037,1.37e-12,168;CL:0000810,4.01e-11,1;CL:0000895,4.01e-11,1;CL:0002436,4.01e-11,1;CL:0002427,4.01e-11,1;CL:0002428,4.01e-11,1;CL:0002429,4.01e-11,1;CL:0002433,4.01e-11,1;CL:0002431,4.01e-11,1;CL:0002432,4.01e-11,1|ontology_enrichment_development_v019=CL:0000790;3.72e-34;18!CL:0000051;1.52e-14;53!CL:0002427;3.11e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.54e-10!102;UBERON:0003061!1.54e-10!102;UBERON:0002193!4.71e-10!112;UBERON:0002370!4.80e-07!4;UBERON:0005058!4.80e-07!4;UBERON:0009113!4.80e-07!4;UBERON:0003295!4.80e-07!4;UBERON:0005562!4.80e-07!4;UBERON:0000178!6.59e-07!15;UBERON:0000179!6.59e-07!15;UBERON:0000463!6.59e-07!15|ontology_enrichment_uberon_v019=UBERON:0002331;7.08e-10;10!UBERON:0000178;9.71e-07;15!UBERON:0000179;9.71e-07;15!UBERON:0000463;9.71e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.09e-10,10;UBERON:0000358,7.09e-10,10;UBERON:0000307,7.09e-10,10;UBERON:0000091,7.09e-10,10;UBERON:0000087,7.09e-10,10;UBERON:0007010,7.09e-10,10;UBERON:0007806,7.09e-10,10;UBERON:0008780,7.09e-10,10;UBERON:0005728,7.09e-10,10;UBERON:0000178,9.71e-07,15;UBERON:0000179,9.71e-07,15;UBERON:0000463,9.71e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0.0821005894499457,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,1.10799081706375,0.802177789880567,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,1.35426486594342,0,0,0,0.612167784741805,0,0,0,0.199463657621632,0,0,0.56738522469114,1.24564449799115,0,0,0.65156653411535,0,1.10483290796269,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,2.360517241366,1.96505381374582,1.23360899399706,0,0,0.473447805734733,0,0,0,0,0.270803863765016,0.25618263945135,0.520237390239513,0,0,0.579606171470105,0,0.535081656179426,0,0,1.14966148080576,0.68725489096526,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0,1.00803371612366,1.06976078313403,1.15859523106239,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,1.57624608161542,1.94064817373566,1.92514554419623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.76813559793659,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3702 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6171 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=20bp_to_ENST00000519759_5end | |||
|description=CAGE_peak_3_at_ITK_5end | |||
|id=chr5:156649779..156649791,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.02e-16!140;CL:0000084!1.62e-15!25;CL:0000827!1.62e-15!25;CL:0002087!4.49e-15!119;CL:0000988!2.09e-13!182;CL:0000080!4.30e-13!6;CL:0002031!4.45e-13!124;CL:0000791!1.03e-12!18;CL:0000789!1.03e-12!18;CL:0002420!1.03e-12!18;CL:0002419!1.03e-12!18;CL:0000790!1.03e-12!18;CL:0000037!1.57e-11!172;CL:0000566!1.57e-11!172;CL:0000838!2.03e-11!52;CL:0000542!3.97e-11!53;CL:0000051!3.97e-11!53;CL:0000623!1.44e-10!3;CL:0000825!1.44e-10!3;CL:0002032!1.53e-10!165;CL:0000837!1.53e-10!165;CL:0000128!1.12e-09!7;CL:0000126!1.12e-09!7;CL:0000127!1.12e-09!7;CL:0002453!1.12e-09!7;CL:0000624!6.13e-09!6;CL:0002057!8.35e-08!42;CL:0000860!4.10e-07!45;CL:0000893!4.45e-07!2;CL:0002489!4.45e-07!2;CL:0000809!4.45e-07!2;CL:0000808!4.45e-07!2;CL:0000894!4.45e-07!2;CL:0000806!4.45e-07!2;CL:0000807!4.45e-07!2;CL:0000805!4.45e-07!2;CL:0002425!4.45e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.72e-34;18!CL:0000789;3.72e-34;18!CL:0002419;3.72e-34;18!CL:0000084;5.59e-31;25!CL:0000623;3.88e-30;3!CL:0000624;9.52e-27;6!CL:0000625;1.32e-14;11!CL:0000542;1.52e-14;53!CL:0000895;3.11e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.31e-34,18;CL:0000789,5.31e-34,18;CL:0002420,5.31e-34,18;CL:0002419,5.31e-34,18;CL:0000790,5.31e-34,18;CL:0000084,7.46e-31,25;CL:0000827,7.46e-31,25;CL:0000623,1.00e-30,3;CL:0000825,1.00e-30,3;CL:0000624,7.31e-27,6;CL:0000838,1.14e-25,52;CL:0000542,3.75e-25,53;CL:0000051,3.75e-25,53;CL:0002087,1.89e-19,115;CL:0002031,1.51e-18,120;CL:0000988,1.30e-17,177;CL:0000738,4.21e-16,136;CL:0000625,2.02e-14,11;CL:0002032,3.06e-13,161;CL:0000837,3.06e-13,161;CL:0000037,1.37e-12,168;CL:0000810,4.01e-11,1;CL:0000895,4.01e-11,1;CL:0002436,4.01e-11,1;CL:0002427,4.01e-11,1;CL:0002428,4.01e-11,1;CL:0002429,4.01e-11,1;CL:0002433,4.01e-11,1;CL:0002431,4.01e-11,1;CL:0002432,4.01e-11,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.72e-34;18!CL:0000051;1.52e-14;53!CL:0002427;3.11e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.54e-10!102;UBERON:0003061!1.54e-10!102;UBERON:0002193!4.71e-10!112;UBERON:0002370!4.80e-07!4;UBERON:0005058!4.80e-07!4;UBERON:0009113!4.80e-07!4;UBERON:0003295!4.80e-07!4;UBERON:0005562!4.80e-07!4;UBERON:0000178!6.59e-07!15;UBERON:0000179!6.59e-07!15;UBERON:0000463!6.59e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.08e-10;10!UBERON:0000178;9.71e-07;15!UBERON:0000179;9.71e-07;15!UBERON:0000463;9.71e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.09e-10,10;UBERON:0000358,7.09e-10,10;UBERON:0000307,7.09e-10,10;UBERON:0000091,7.09e-10,10;UBERON:0000087,7.09e-10,10;UBERON:0007010,7.09e-10,10;UBERON:0007806,7.09e-10,10;UBERON:0008780,7.09e-10,10;UBERON:0005728,7.09e-10,10;UBERON:0000178,9.71e-07,15;UBERON:0000179,9.71e-07,15;UBERON:0000463,9.71e-07,15 | |||
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|short_description=p3@ITK | |||
}} |
Revision as of 14:24, 13 September 2013
Short description: | p3@ITK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ITK_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000519759_5end |
EntrezGene: | ITK |
HGNC: | 6171 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 7.09e-10 | 10 |
blastocyst | 7.09e-10 | 10 |
blastula | 7.09e-10 | 10 |
bilaminar disc | 7.09e-10 | 10 |
inner cell mass | 7.09e-10 | 10 |
cleaving embryo | 7.09e-10 | 10 |
connecting stalk | 7.09e-10 | 10 |
inner cell mass derived epiblast | 7.09e-10 | 10 |
extraembryonic mesoderm | 7.09e-10 | 10 |
blood | 9.71e-07 | 15 |
haemolymphatic fluid | 9.71e-07 | 15 |
organism substance | 9.71e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.