FFCP PHASE1:Mm9::chr17:69476739..69476749,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=218|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:69476739..69476749,+|id=chr17:69476739..69476749,+|ontology_enrichment_celltype=CL:0002614!6.11e-09!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!1.28e-16!6;UBERON:0002950!1.83e-11!4;UBERON:0001891!1.83e-11!4;UBERON:0009616!1.83e-11!4;UBERON:0003076!5.22e-10!12;UBERON:0003057!5.22e-10!12;UBERON:0002038!6.11e-09!3;UBERON:0002308!6.11e-09!3;UBERON:0009663!6.11e-09!3;UBERON:0009661!6.11e-09!3;UBERON:0006331!6.11e-09!3;UBERON:0000125!6.11e-09!3;UBERON:0000073!2.31e-08!75;UBERON:0001016!2.31e-08!75;UBERON:0001017!9.93e-08!73;UBERON:0005743!9.93e-08!73;UBERON:0002240!5.17e-07!6;UBERON:0005174!5.17e-07!6;UBERON:0001137!5.17e-07!6;UBERON:0001049!5.37e-07!52;UBERON:0005068!5.37e-07!52;UBERON:0006241!5.37e-07!52;UBERON:0007135!5.37e-07!52;UBERON:0001896!8.97e-07!2;UBERON:0005290!8.97e-07!2;UBERON:0010096!8.97e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.43e-30,2;UBERON:0002298,2.43e-30,2;UBERON:0005290,2.43e-30,2;UBERON:0010096,2.43e-30,2;UBERON:0002259,9.51e-16,1;UBERON:0002314,9.51e-16,1;UBERON:0004061,9.51e-16,1;UBERON:0006777,9.51e-16,1;UBERON:0005882,9.51e-16,1;UBERON:0002950,2.21e-15,4;UBERON:0001891,2.21e-15,4;UBERON:0009616,2.21e-15,4;UBERON:0010286,2.21e-15,4;UBERON:0003076,8.02e-12,12;UBERON:0003057,8.02e-12,12;UBERON:0004733,7.63e-11,6;UBERON:0004732,7.63e-11,6;UBERON:0002028,7.63e-11,6;UBERON:0007277,7.63e-11,6;UBERON:0001017,1.48e-07,73;UBERON:0001049,1.88e-07,52;UBERON:0005068,1.88e-07,52;UBERON:0006241,1.88e-07,52;UBERON:0007135,1.88e-07,52;UBERON:0001016,2.31e-07,75;UBERON:0000073,3.91e-07,54|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,1.0214987046815,0.46081959976873,0,0,0,0.837548997004143,1.12552522006336,0.61119299110724,0,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.49790639404823,0,0,0.173824320192276,0,0.62336413367868,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,2.93029216480508,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p@chr17:69476739..69476749,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=218 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:69476739..69476749,+ | |||
|id=chr17:69476739..69476749,+ | |||
|ontology_enrichment_celltype=CL:0002614!6.11e-09!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!1.28e-16!6;UBERON:0002950!1.83e-11!4;UBERON:0001891!1.83e-11!4;UBERON:0009616!1.83e-11!4;UBERON:0003076!5.22e-10!12;UBERON:0003057!5.22e-10!12;UBERON:0002038!6.11e-09!3;UBERON:0002308!6.11e-09!3;UBERON:0009663!6.11e-09!3;UBERON:0009661!6.11e-09!3;UBERON:0006331!6.11e-09!3;UBERON:0000125!6.11e-09!3;UBERON:0000073!2.31e-08!75;UBERON:0001016!2.31e-08!75;UBERON:0001017!9.93e-08!73;UBERON:0005743!9.93e-08!73;UBERON:0002240!5.17e-07!6;UBERON:0005174!5.17e-07!6;UBERON:0001137!5.17e-07!6;UBERON:0001049!5.37e-07!52;UBERON:0005068!5.37e-07!52;UBERON:0006241!5.37e-07!52;UBERON:0007135!5.37e-07!52;UBERON:0001896!8.97e-07!2;UBERON:0005290!8.97e-07!2;UBERON:0010096!8.97e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.43e-30,2;UBERON:0002298,2.43e-30,2;UBERON:0005290,2.43e-30,2;UBERON:0010096,2.43e-30,2;UBERON:0002259,9.51e-16,1;UBERON:0002314,9.51e-16,1;UBERON:0004061,9.51e-16,1;UBERON:0006777,9.51e-16,1;UBERON:0005882,9.51e-16,1;UBERON:0002950,2.21e-15,4;UBERON:0001891,2.21e-15,4;UBERON:0009616,2.21e-15,4;UBERON:0010286,2.21e-15,4;UBERON:0003076,8.02e-12,12;UBERON:0003057,8.02e-12,12;UBERON:0004733,7.63e-11,6;UBERON:0004732,7.63e-11,6;UBERON:0002028,7.63e-11,6;UBERON:0007277,7.63e-11,6;UBERON:0001017,1.48e-07,73;UBERON:0001049,1.88e-07,52;UBERON:0005068,1.88e-07,52;UBERON:0006241,1.88e-07,52;UBERON:0007135,1.88e-07,52;UBERON:0001016,2.31e-07,75;UBERON:0000073,3.91e-07,54 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,1.0214987046815,0.46081959976873,0,0,0,0.837548997004143,1.12552522006336,0.61119299110724,0,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.49790639404823,0,0,0.173824320192276,0,0.62336413367868,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,2.93029216480508,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr17:69476739..69476749,+ | |||
}} |
Revision as of 15:11, 13 September 2013
Short description: | p@chr17:69476739..69476749, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:69476739..69476749, + |
Coexpression cluster: | MCL_coexpression_mm9:218 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.43e-30 | 2 |
brainstem | 2.43e-30 | 2 |
myelencephalon | 2.43e-30 | 2 |
future myelencephalon | 2.43e-30 | 2 |
corpora quadrigemina | 9.51e-16 | 1 |
midbrain tectum | 9.51e-16 | 1 |
neural tube mantle layer | 9.51e-16 | 1 |
tectal plate | 9.51e-16 | 1 |
neural tube alar plate | 9.51e-16 | 1 |
regional part of midbrain | 2.21e-15 | 4 |
midbrain | 2.21e-15 | 4 |
presumptive midbrain | 2.21e-15 | 4 |
midbrain neural tube | 2.21e-15 | 4 |
posterior neural tube | 8.02e-12 | 12 |
chordal neural plate | 8.02e-12 | 12 |
segmental subdivision of hindbrain | 7.63e-11 | 6 |
segmental subdivision of nervous system | 7.63e-11 | 6 |
hindbrain | 7.63e-11 | 6 |
presumptive hindbrain | 7.63e-11 | 6 |
central nervous system | 1.48e-07 | 73 |
neural tube | 1.88e-07 | 52 |
neural rod | 1.88e-07 | 52 |
future spinal cord | 1.88e-07 | 52 |
neural keel | 1.88e-07 | 52 |
nervous system | 2.31e-07 | 75 |
regional part of nervous system | 3.91e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.