FFCP PHASE1:Hg19::chr6:149806045..149806063,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=340152|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21175|TSSclassifier=S|UniProt=|association_with_transcript=-15bp_to_uc003qmm.2,uc010kid.2_5end|coexpression_cluster_id=C901|description=CAGE_peak_5_at_ZC3H12D_5end|id=chr6:149806045..149806063,-|ontology_enrichment_celltype=CL:0000738!3.64e-58!140;CL:0002087!2.34e-53!119;CL:0000037!3.78e-53!172;CL:0000566!3.78e-53!172;CL:0002031!1.14e-51!124;CL:0000988!1.63e-49!182;CL:0002032!1.98e-49!165;CL:0000837!1.98e-49!165;CL:0000542!5.30e-47!53;CL:0000051!5.30e-47!53;CL:0000838!2.33e-46!52;CL:0000945!3.93e-23!24;CL:0000826!3.93e-23!24;CL:0000791!8.46e-21!18;CL:0000789!8.46e-21!18;CL:0002420!8.46e-21!18;CL:0002419!8.46e-21!18;CL:0000790!8.46e-21!18;CL:0000084!3.08e-20!25;CL:0000827!3.08e-20!25;CL:0000236!4.46e-14!14;CL:0000557!1.15e-13!71;CL:0000763!9.95e-13!112;CL:0000049!9.95e-13!112;CL:0000134!1.97e-12!358;CL:0000625!3.91e-12!11;CL:0002009!4.35e-12!65;CL:0002320!1.21e-11!365;CL:0000839!7.94e-11!70;CL:0000766!9.61e-11!76;CL:0002194!1.58e-10!63;CL:0000576!1.58e-10!63;CL:0000040!1.58e-10!63;CL:0000559!1.58e-10!63;CL:0000624!1.28e-09!6;CL:0000219!6.08e-09!390;CL:0000451!1.65e-07!10|ontology_enrichment_celltype_v019=CL:0000791;2.75e-35;18!CL:0000789;2.75e-35;18!CL:0002419;2.75e-35;18!CL:0000542;3.68e-34;53!CL:0000084;4.54e-27;25!CL:0000945;1.69e-25;24!CL:0000625;2.68e-22;11!CL:0000236;1.36e-17;13!CL:0000624;3.70e-17;6!CL:0002087;1.98e-12;104!CL:0000898;2.32e-09;3!CL:0000623;6.60e-09;3!CL:0000226;1.35e-07;3!CL:0002619;1.35e-07;3!CL:0000842;1.35e-07;3!CL:0001014;6.86e-07;2!CL:0001016;6.86e-07;2!CL:0000815;9.01e-07;2!CL:0000792;9.01e-07;2!CL:0002677;9.01e-07;2|ontology_enrichment_celltype_v019_2=CL:0000838,7.35e-59,52;CL:0000542,1.53e-57,53;CL:0000051,1.53e-57,53;CL:0002087,1.01e-39,115;CL:0000738,7.23e-37,136;CL:0002031,3.44e-36,120;CL:0000791,1.66e-35,18;CL:0000789,1.66e-35,18;CL:0002420,1.66e-35,18;CL:0002419,1.66e-35,18;CL:0000790,1.66e-35,18;CL:0000037,6.80e-33,168;CL:0000988,1.75e-30,177;CL:0002032,4.46e-29,161;CL:0000837,4.46e-29,161;CL:0000084,3.28e-27,25;CL:0000827,3.28e-27,25;CL:0000945,2.10e-25,24;CL:0000826,2.10e-25,24;CL:0000625,1.60e-22,11;CL:0000624,3.73e-17,6;CL:0000236,2.07e-16,14;CL:0000898,2.30e-09,3;CL:0000623,4.71e-09,3;CL:0000825,4.71e-09,3;CL:0000134,2.57e-08,354;CL:0002320,6.61e-08,361;CL:0000226,1.07e-07,3;CL:0000842,1.07e-07,3;CL:0002619,1.35e-07,3;CL:0001014,6.79e-07,2;CL:0001016,6.79e-07,2;CL:0000815,8.91e-07,2;CL:0000792,8.91e-07,2;CL:0002677,8.91e-07,2|ontology_enrichment_development_v019=CL:0000790;2.75e-35;18!CL:0000051;3.68e-34;53|ontology_enrichment_disease=DOID:2531!7.40e-08!51;DOID:0060083!7.40e-08!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.00e-23!102;UBERON:0003061!2.00e-23!102;UBERON:0002193!6.90e-22!112;UBERON:0002405!4.09e-12!115;UBERON:0002371!1.30e-11!80;UBERON:0002384!1.40e-10!375;UBERON:0001474!4.80e-10!86;UBERON:0000178!5.24e-10!15;UBERON:0000179!5.24e-10!15;UBERON:0000463!5.24e-10!15;UBERON:0004177!7.14e-08!7;UBERON:0004765!4.65e-07!101;UBERON:0001434!4.65e-07!101|ontology_enrichment_uberon_v019=UBERON:0000178;1.20e-13;15!UBERON:0000179;1.20e-13;15!UBERON:0000463;1.20e-13;15!UBERON:0002390;2.65e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.01e-13,15;UBERON:0000179,1.01e-13,15;UBERON:0000463,1.01e-13,15;UBERON:0002390,1.98e-08,98;UBERON:0003061,1.98e-08,98;UBERON:0002193,5.65e-08,108;UBERON:0002384,2.37e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,0.656804715599566,1.10195093839151,0,0.767658796194425,0.309632246632152,0,0,0,2.01414721508784,2.41687695228617,0,0,2.4065333696417,2.17010870715852,1.11957737119962,2.91504299417082,1.28787783817093,0.872389432677388,0,0,0.929716147622738,0,0,0.28769239232215,0,0,1.37898272294647,0,0,0.376484679085209,0,0,0.306083892370903,0,0,0.989553900560148,0.199463657621632,0.426224750532694,0,0.56738522469114,0,0.251248665256743,0,0,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0.16072558669708,0.285012743741249,0.19891667719909,0,0,2.18455444504853,2.66852776159066,2.56038133539904,2.80277190925209,4.02326707968138,3.96626923670917,1.90810750907073,2.84606484554724,2.34894875748376,2.6759125968766,0,1.68152568894461,0.263384084775077,12.982844827513,12.9693551707224,10.6912779479745,1.33749196312542,6.8443675993054,4.73447805734733,1.94826728407911,2.67385096524417,7.07054177939609,5.98141515375777,4.87446954777028,3.20228299314188,2.73124629875744,0.328875809207352,0.276350017785848,1.15921234294021,3.55887751588945,1.87278579662799,2.09071047609954,0.679856056185397,8.81407135284419,4.46715679127419,4.30133476433155,3.18565414324097,2.60433381542567,2.85135613334512,3.91495309602209,3.83959833463255,2.49861453104692,2.8413270245282,0,4.03213486449465,4.54648332831962,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0.664789802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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=340152 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21175 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-15bp_to_uc003qmm.2,uc010kid.2_5end | |||
|coexpression_cluster_id=C901 | |||
|description=CAGE_peak_5_at_ZC3H12D_5end | |||
|id=chr6:149806045..149806063,- | |||
|ontology_enrichment_celltype=CL:0000738!3.64e-58!140;CL:0002087!2.34e-53!119;CL:0000037!3.78e-53!172;CL:0000566!3.78e-53!172;CL:0002031!1.14e-51!124;CL:0000988!1.63e-49!182;CL:0002032!1.98e-49!165;CL:0000837!1.98e-49!165;CL:0000542!5.30e-47!53;CL:0000051!5.30e-47!53;CL:0000838!2.33e-46!52;CL:0000945!3.93e-23!24;CL:0000826!3.93e-23!24;CL:0000791!8.46e-21!18;CL:0000789!8.46e-21!18;CL:0002420!8.46e-21!18;CL:0002419!8.46e-21!18;CL:0000790!8.46e-21!18;CL:0000084!3.08e-20!25;CL:0000827!3.08e-20!25;CL:0000236!4.46e-14!14;CL:0000557!1.15e-13!71;CL:0000763!9.95e-13!112;CL:0000049!9.95e-13!112;CL:0000134!1.97e-12!358;CL:0000625!3.91e-12!11;CL:0002009!4.35e-12!65;CL:0002320!1.21e-11!365;CL:0000839!7.94e-11!70;CL:0000766!9.61e-11!76;CL:0002194!1.58e-10!63;CL:0000576!1.58e-10!63;CL:0000040!1.58e-10!63;CL:0000559!1.58e-10!63;CL:0000624!1.28e-09!6;CL:0000219!6.08e-09!390;CL:0000451!1.65e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.75e-35;18!CL:0000789;2.75e-35;18!CL:0002419;2.75e-35;18!CL:0000542;3.68e-34;53!CL:0000084;4.54e-27;25!CL:0000945;1.69e-25;24!CL:0000625;2.68e-22;11!CL:0000236;1.36e-17;13!CL:0000624;3.70e-17;6!CL:0002087;1.98e-12;104!CL:0000898;2.32e-09;3!CL:0000623;6.60e-09;3!CL:0000226;1.35e-07;3!CL:0002619;1.35e-07;3!CL:0000842;1.35e-07;3!CL:0001014;6.86e-07;2!CL:0001016;6.86e-07;2!CL:0000815;9.01e-07;2!CL:0000792;9.01e-07;2!CL:0002677;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.35e-59,52;CL:0000542,1.53e-57,53;CL:0000051,1.53e-57,53;CL:0002087,1.01e-39,115;CL:0000738,7.23e-37,136;CL:0002031,3.44e-36,120;CL:0000791,1.66e-35,18;CL:0000789,1.66e-35,18;CL:0002420,1.66e-35,18;CL:0002419,1.66e-35,18;CL:0000790,1.66e-35,18;CL:0000037,6.80e-33,168;CL:0000988,1.75e-30,177;CL:0002032,4.46e-29,161;CL:0000837,4.46e-29,161;CL:0000084,3.28e-27,25;CL:0000827,3.28e-27,25;CL:0000945,2.10e-25,24;CL:0000826,2.10e-25,24;CL:0000625,1.60e-22,11;CL:0000624,3.73e-17,6;CL:0000236,2.07e-16,14;CL:0000898,2.30e-09,3;CL:0000623,4.71e-09,3;CL:0000825,4.71e-09,3;CL:0000134,2.57e-08,354;CL:0002320,6.61e-08,361;CL:0000226,1.07e-07,3;CL:0000842,1.07e-07,3;CL:0002619,1.35e-07,3;CL:0001014,6.79e-07,2;CL:0001016,6.79e-07,2;CL:0000815,8.91e-07,2;CL:0000792,8.91e-07,2;CL:0002677,8.91e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.75e-35;18!CL:0000051;3.68e-34;53 | |||
|ontology_enrichment_disease=DOID:2531!7.40e-08!51;DOID:0060083!7.40e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.00e-23!102;UBERON:0003061!2.00e-23!102;UBERON:0002193!6.90e-22!112;UBERON:0002405!4.09e-12!115;UBERON:0002371!1.30e-11!80;UBERON:0002384!1.40e-10!375;UBERON:0001474!4.80e-10!86;UBERON:0000178!5.24e-10!15;UBERON:0000179!5.24e-10!15;UBERON:0000463!5.24e-10!15;UBERON:0004177!7.14e-08!7;UBERON:0004765!4.65e-07!101;UBERON:0001434!4.65e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.20e-13;15!UBERON:0000179;1.20e-13;15!UBERON:0000463;1.20e-13;15!UBERON:0002390;2.65e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.01e-13,15;UBERON:0000179,1.01e-13,15;UBERON:0000463,1.01e-13,15;UBERON:0002390,1.98e-08,98;UBERON:0003061,1.98e-08,98;UBERON:0002193,5.65e-08,108;UBERON:0002384,2.37e-07,371 | |||
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|short_description=p5@ZC3H12D | |||
}} |
Revision as of 18:41, 13 September 2013
Short description: | p5@ZC3H12D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ZC3H12D_5end |
Coexpression cluster: | C901_immature_CD4_Natural_CD19_CD8_lymphoma_tonsil |
Association with transcript: | -15bp_to_uc003qmm.2, uc010kid.2_5end |
EntrezGene: | ZC3H12D |
HGNC: | 21175 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.01e-13 | 15 |
haemolymphatic fluid | 1.01e-13 | 15 |
organism substance | 1.01e-13 | 15 |
hematopoietic system | 1.98e-08 | 98 |
blood island | 1.98e-08 | 98 |
hemolymphoid system | 5.65e-08 | 108 |
connective tissue | 2.37e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.