FFCP PHASE1:Mm9::chr2:127161888..127161902,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13537|HGNC=|MCL_coexpression_id=7|UniProt=Q05922|association_with_transcript=0bp_to_ENSMUST00000028846,NM_010090,uc008mff.1_5end|description=CAGE_peak_1_at_Dusp2_5end|id=chr2:127161888..127161902,+|ontology_enrichment_celltype=CL:0000988!1.16e-13!32;CL:0002032!1.16e-13!32;CL:0000037!1.16e-13!32;CL:0000566!1.16e-13!32;CL:0000837!1.16e-13!32;CL:0002031!5.29e-11!25;CL:0000838!4.30e-09!12;CL:0002320!9.53e-09!46;CL:0000134!9.53e-09!46;CL:0000084!2.08e-08!11;CL:0000827!2.08e-08!11;CL:0000542!5.98e-08!13;CL:0000051!5.98e-08!13;CL:0000791!1.85e-07!9;CL:0000789!1.85e-07!9;CL:0002420!1.85e-07!9;CL:0002419!1.85e-07!9;CL:0000790!1.85e-07!9;CL:0000049!4.16e-07!19;CL:0000624!8.46e-07!8|ontology_enrichment_celltype_v019_2=CL:0000988,1.36e-13,32;CL:0002032,1.36e-13,32;CL:0000037,1.36e-13,32;CL:0000837,1.36e-13,32;CL:0002031,6.58e-11,25;CL:0002320,3.12e-09,46;CL:0000134,3.12e-09,46;CL:0000838,3.62e-09,12;CL:0000084,1.77e-08,11;CL:0000827,1.77e-08,11;CL:0000542,5.16e-08,13;CL:0000051,5.16e-08,13;CL:0000791,1.62e-07,9;CL:0000789,1.62e-07,9;CL:0002420,1.62e-07,9;CL:0002419,1.62e-07,9;CL:0000790,1.62e-07,9;CL:0000049,5.36e-07,19;CL:0000624,7.50e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.96e-15!48;UBERON:0002390!3.67e-14!45;UBERON:0003061!3.67e-14!45;UBERON:0003081!1.30e-11!88;UBERON:0004177!9.90e-11!29;UBERON:0002405!2.17e-10!70;UBERON:0002384!9.53e-09!46;UBERON:0003408!1.11e-08!24;UBERON:0002370!2.36e-08!23;UBERON:0000974!2.36e-08!23;UBERON:0004807!2.36e-08!23;UBERON:0005058!2.36e-08!23;UBERON:0003351!2.36e-08!23;UBERON:0009113!2.36e-08!23;UBERON:0003295!2.36e-08!23;UBERON:0009722!2.36e-08!23;UBERON:0005562!2.36e-08!23;UBERON:0007690!2.36e-08!23;UBERON:0006562!1.10e-07!24;UBERON:0001557!1.10e-07!24;UBERON:0001042!1.10e-07!24;UBERON:0008814!1.10e-07!24;UBERON:0009145!1.10e-07!24;UBERON:0001004!2.41e-07!42;UBERON:0000065!4.81e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.03e-15,48;UBERON:0002405,1.03e-15,48;UBERON:0002390,2.01e-14,45;UBERON:0003061,2.01e-14,45;UBERON:0003081,2.04e-11,87;UBERON:0004177,3.85e-11,29;UBERON:0005057,3.85e-11,29;UBERON:0000077,3.81e-10,35;UBERON:0002384,3.12e-09,46;UBERON:0003408,4.63e-09,24;UBERON:0002370,9.93e-09,23;UBERON:0000974,9.93e-09,23;UBERON:0004807,9.93e-09,23;UBERON:0005058,9.93e-09,23;UBERON:0003351,9.93e-09,23;UBERON:0009113,9.93e-09,23;UBERON:0003295,9.93e-09,23;UBERON:0009722,9.93e-09,23;UBERON:0005562,9.93e-09,23;UBERON:0007690,9.93e-09,23;UBERON:0006562,4.93e-08,24;UBERON:0001557,4.93e-08,24;UBERON:0001042,4.93e-08,24;UBERON:0008814,4.93e-08,24;UBERON:0009145,4.93e-08,24;UBERON:0000926,7.98e-08,120;UBERON:0004120,7.98e-08,120;UBERON:0006603,7.98e-08,120;UBERON:0001004,1.57e-07,42;UBERON:0000065,3.18e-07,41|phase1_expression=5.12476310735341,0.348975407639361,0,0.30246421130683,0,3.52546471014969,2.33612640595526,822.128200352516,4063.44409874141,6117.97858900427,749.421046923035,687.237149744823,483.128459865863,489.204571936709,24.650122374359,49.2014899757277,22.3859801001007,312.623005870014,284.923793032725,458.765213593671,4.59233766815777,74.0710495958604,50.4115593038145,13.2793710918528,19.4997888907094,0.57423196411502,0.430761996159075,0,1.14014051673824,1.51218077855958,3.76941868114018,122.560919977709,96.5651716507775,95.0890086092632,0.288851619751275,0.332469290716985,1.02084678131185,2.92972141515835,6.2506827561904,1.0470474879476,12.9410927366823,8.87959130445979,9.22469670759192,0,0,0,1.56478268869608,0,0.219686182734472,1.36100929351998,2.79972843250725,0,783.712552895686,404.75207524233,661.096502913227,0,2.57880095944881,1.54701627683233,2.83243045203437,3.70293685490423,3.80298842103708,19.3141383279405,5.33576877666684,5.39939830368839,7.9109309005358,8.5257613793532,2.09720077362883,0.768436610643109,3.62913643079672,5.8052553482627,2.94454945891935,2.85650984403804,4.19650227808066,3.42974237801871,2.58782771749238,4.5960939330501,0,0.255374676170375,0.153606533256243,2.1101806036831,5.39777097254217,5.2091337055676,0,0,0,0.589257170947335,2.27794689278565,4.28718725398191,1.59025005999687,1.66257432234928,35.3634676216047,7.74381489283248,0,0,0,0,9.69066498909088,0,0,0,0.281686839553361,0,0,0,1.5154372870785,1.01343946190039,0.505524445014783,11.7609396110632,46.6088190564909,6.97678053604676,4.68410382268567,2.13125834818499,1.84492397804847,2.56228488939458,2.3517741427141,1.63366568728578,0.988779870937496,1.59059292611903,19.4614321428972,5.50007289821191,18.5506875506731,18.4252596191384,3.72783522436244,0,0,3.83185582812887,323.381021041479,302.950879151671,214.875753980552,0.149790639404823,0,1.25654352112864,0,0.255715457330331,0,0,6.72139801412087,20.4027431800553,0.758168275301024,0.210441855886474,2.21204753036596,1.83921683546778,1.26043490863744,0.753524089178575,1.02054748726992,1.5373646434182,1.3118241438362,0.517406741478031,1.94011193639558,1.51284864134255,2.28736461413134,3.94552318369635,4.72680323683516,4.52727816478817,3.0867320461191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| ||
|EntrezGene=13537 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=Q05922 | |||
|association_with_transcript=0bp_to_ENSMUST00000028846,NM_010090,uc008mff.1_5end | |||
|description=CAGE_peak_1_at_Dusp2_5end | |||
|id=chr2:127161888..127161902,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.16e-13!32;CL:0002032!1.16e-13!32;CL:0000037!1.16e-13!32;CL:0000566!1.16e-13!32;CL:0000837!1.16e-13!32;CL:0002031!5.29e-11!25;CL:0000838!4.30e-09!12;CL:0002320!9.53e-09!46;CL:0000134!9.53e-09!46;CL:0000084!2.08e-08!11;CL:0000827!2.08e-08!11;CL:0000542!5.98e-08!13;CL:0000051!5.98e-08!13;CL:0000791!1.85e-07!9;CL:0000789!1.85e-07!9;CL:0002420!1.85e-07!9;CL:0002419!1.85e-07!9;CL:0000790!1.85e-07!9;CL:0000049!4.16e-07!19;CL:0000624!8.46e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.36e-13,32;CL:0002032,1.36e-13,32;CL:0000037,1.36e-13,32;CL:0000837,1.36e-13,32;CL:0002031,6.58e-11,25;CL:0002320,3.12e-09,46;CL:0000134,3.12e-09,46;CL:0000838,3.62e-09,12;CL:0000084,1.77e-08,11;CL:0000827,1.77e-08,11;CL:0000542,5.16e-08,13;CL:0000051,5.16e-08,13;CL:0000791,1.62e-07,9;CL:0000789,1.62e-07,9;CL:0002420,1.62e-07,9;CL:0002419,1.62e-07,9;CL:0000790,1.62e-07,9;CL:0000049,5.36e-07,19;CL:0000624,7.50e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.96e-15!48;UBERON:0002390!3.67e-14!45;UBERON:0003061!3.67e-14!45;UBERON:0003081!1.30e-11!88;UBERON:0004177!9.90e-11!29;UBERON:0002405!2.17e-10!70;UBERON:0002384!9.53e-09!46;UBERON:0003408!1.11e-08!24;UBERON:0002370!2.36e-08!23;UBERON:0000974!2.36e-08!23;UBERON:0004807!2.36e-08!23;UBERON:0005058!2.36e-08!23;UBERON:0003351!2.36e-08!23;UBERON:0009113!2.36e-08!23;UBERON:0003295!2.36e-08!23;UBERON:0009722!2.36e-08!23;UBERON:0005562!2.36e-08!23;UBERON:0007690!2.36e-08!23;UBERON:0006562!1.10e-07!24;UBERON:0001557!1.10e-07!24;UBERON:0001042!1.10e-07!24;UBERON:0008814!1.10e-07!24;UBERON:0009145!1.10e-07!24;UBERON:0001004!2.41e-07!42;UBERON:0000065!4.81e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.03e-15,48;UBERON:0002405,1.03e-15,48;UBERON:0002390,2.01e-14,45;UBERON:0003061,2.01e-14,45;UBERON:0003081,2.04e-11,87;UBERON:0004177,3.85e-11,29;UBERON:0005057,3.85e-11,29;UBERON:0000077,3.81e-10,35;UBERON:0002384,3.12e-09,46;UBERON:0003408,4.63e-09,24;UBERON:0002370,9.93e-09,23;UBERON:0000974,9.93e-09,23;UBERON:0004807,9.93e-09,23;UBERON:0005058,9.93e-09,23;UBERON:0003351,9.93e-09,23;UBERON:0009113,9.93e-09,23;UBERON:0003295,9.93e-09,23;UBERON:0009722,9.93e-09,23;UBERON:0005562,9.93e-09,23;UBERON:0007690,9.93e-09,23;UBERON:0006562,4.93e-08,24;UBERON:0001557,4.93e-08,24;UBERON:0001042,4.93e-08,24;UBERON:0008814,4.93e-08,24;UBERON:0009145,4.93e-08,24;UBERON:0000926,7.98e-08,120;UBERON:0004120,7.98e-08,120;UBERON:0006603,7.98e-08,120;UBERON:0001004,1.57e-07,42;UBERON:0000065,3.18e-07,41 | |||
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| |||
|short_description=p1@Dusp2 | |||
}} |
Revision as of 21:59, 13 September 2013
Short description: | p1@Dusp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dusp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_ENSMUST00000028846, NM_010090, uc008mff.1_5end |
EntrezGene: | Dusp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.36e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.36e-13 | 32 |
hematopoietic stem cell | 1.36e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.36e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 6.58e-11 | 25 |
connective tissue cell | 3.12e-09 | 46 |
mesenchymal cell | 3.12e-09 | 46 |
lymphoid lineage restricted progenitor cell | 3.62e-09 | 12 |
T cell | 1.77e-08 | 11 |
pro-T cell | 1.77e-08 | 11 |
lymphocyte | 5.16e-08 | 13 |
common lymphoid progenitor | 5.16e-08 | 13 |
mature alpha-beta T cell | 1.62e-07 | 9 |
alpha-beta T cell | 1.62e-07 | 9 |
immature T cell | 1.62e-07 | 9 |
mature T cell | 1.62e-07 | 9 |
immature alpha-beta T cell | 1.62e-07 | 9 |
common myeloid progenitor | 5.36e-07 | 19 |
CD4-positive, alpha-beta T cell | 7.50e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.03e-15 | 48 |
immune system | 1.03e-15 | 48 |
hematopoietic system | 2.01e-14 | 45 |
blood island | 2.01e-14 | 45 |
lateral plate mesoderm | 2.04e-11 | 87 |
hemopoietic organ | 3.85e-11 | 29 |
immune organ | 3.85e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 3.81e-10 | 35 |
connective tissue | 3.12e-09 | 46 |
gland of gut | 4.63e-09 | 24 |
thymus | 9.93e-09 | 23 |
neck | 9.93e-09 | 23 |
respiratory system epithelium | 9.93e-09 | 23 |
hemolymphoid system gland | 9.93e-09 | 23 |
pharyngeal epithelium | 9.93e-09 | 23 |
thymic region | 9.93e-09 | 23 |
pharyngeal gland | 9.93e-09 | 23 |
entire pharyngeal arch endoderm | 9.93e-09 | 23 |
thymus primordium | 9.93e-09 | 23 |
early pharyngeal endoderm | 9.93e-09 | 23 |
pharynx | 4.93e-08 | 24 |
upper respiratory tract | 4.93e-08 | 24 |
chordate pharynx | 4.93e-08 | 24 |
pharyngeal arch system | 4.93e-08 | 24 |
pharyngeal region of foregut | 4.93e-08 | 24 |
mesoderm | 7.98e-08 | 120 |
mesoderm-derived structure | 7.98e-08 | 120 |
presumptive mesoderm | 7.98e-08 | 120 |
respiratory system | 1.57e-07 | 42 |
respiratory tract | 3.18e-07 | 41 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.