FFCP PHASE1:Hg19::chr7:128399002..128399018,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=813 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1458 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000493278_5end | |||
|coexpression_cluster_id=C1281 | |||
|description=CAGE_peak_4_at_CALU_5end | |||
|id=chr7:128399002..128399018,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.27e-22!180;CL:0000057!1.48e-14!75;CL:0000548!2.24e-09!679;CL:0000004!2.24e-09!679;CL:0000255!2.24e-09!679;CL:0002620!6.28e-09!23;CL:0000012!9.44e-09!682;CL:0000680!1.28e-08!57;CL:0000056!1.28e-08!57;CL:0000355!1.28e-08!57;CL:0000393!1.73e-08!60;CL:0000211!1.73e-08!60;CL:0000187!2.31e-08!54;CL:0000192!2.91e-08!42;CL:0000514!2.91e-08!42;CL:0000220!7.85e-08!246;CL:0002321!1.12e-07!248;CL:0000183!1.57e-07!59;CL:0000359!2.47e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000134;2.17e-12;55!CL:0000048;7.96e-11;58!CL:0000723;1.53e-09;61!CL:0002620;1.80e-09;23!CL:0000034;1.00e-08;69!CL:0002334;5.62e-08;12!CL:0002320;2.86e-07;188!CL:0000192;5.11e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.98e-16,76;CL:0000048,5.76e-15,427;CL:0000034,1.22e-14,441;CL:0000723,3.00e-14,433;CL:0002620,2.16e-09,23;CL:0000680,7.00e-09,58;CL:0000056,7.00e-09,58;CL:0000355,7.00e-09,58;CL:0000192,1.02e-08,43;CL:0000514,1.02e-08,43;CL:0000187,4.61e-08,55;CL:0002334,6.07e-08,12;CL:0000134,7.27e-08,354;CL:0000393,7.87e-08,61;CL:0000211,7.87e-08,61;CL:0002320,1.45e-07,361;CL:0000219,6.77e-07,386;CL:0000359,9.68e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;5.11e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!1.58e-08!14;DOID:193!6.49e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.85e-14;14!DOID:193;3.73e-09;29!DOID:120;3.98e-09;27!DOID:17;4.40e-07;5!DOID:450;4.40e-07;5!DOID:66;4.40e-07;5!DOID:423;4.40e-07;5!DOID:0080000;4.40e-07;5!DOID:11722;4.40e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.23e-14,14;DOID:193,2.86e-09,29;DOID:120,3.57e-09,27;DOID:17,4.39e-07,5;DOID:450,4.39e-07,5;DOID:66,4.39e-07,5;DOID:423,4.39e-07,5;DOID:0080000,4.39e-07,5;DOID:11722,4.39e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.13e-10!83;UBERON:0002329!6.13e-10!83;UBERON:0003077!6.13e-10!83;UBERON:0003059!6.13e-10!83;UBERON:0007282!6.13e-10!83;UBERON:0009618!6.13e-10!83;UBERON:0007285!6.13e-10!83;UBERON:0003102!1.15e-09!95;UBERON:0004290!1.78e-09!70;UBERON:0002199!1.89e-09!45;UBERON:0002416!1.89e-09!45;UBERON:0002097!3.11e-09!40;UBERON:0000486!1.05e-08!82;UBERON:0001134!9.73e-08!61;UBERON:0002036!9.73e-08!61;UBERON:0003082!9.73e-08!61;UBERON:0002385!1.17e-07!63;UBERON:0001015!1.17e-07!63;UBERON:0000383!1.17e-07!63;UBERON:0001637!7.68e-07!42;UBERON:0003509!7.68e-07!42;UBERON:0004572!7.68e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.46e-08;9!UBERON:0000042;4.46e-08;9!UBERON:0002384;1.75e-07;198!UBERON:0004573;1.92e-07;33!UBERON:0004571;1.92e-07;33!UBERON:0002097;2.38e-07;41!UBERON:0000992;4.70e-07;13!UBERON:0003688;4.70e-07;6!UBERON:0002358;4.70e-07;6!UBERON:0003684;4.70e-07;6!UBERON:0001178;4.70e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.24e-10,73;UBERON:0002329,1.71e-10,71;UBERON:0003059,1.71e-10,71;UBERON:0007282,1.71e-10,71;UBERON:0004290,1.71e-10,71;UBERON:0009618,1.71e-10,71;UBERON:0003077,3.33e-10,72;UBERON:0007285,3.33e-10,72;UBERON:0007503,5.27e-10,78;UBERON:0002097,6.32e-10,41;UBERON:0002199,7.70e-10,46;UBERON:0002416,7.70e-10,46;UBERON:0000486,3.88e-09,83;UBERON:0001134,1.69e-08,62;UBERON:0002036,1.69e-08,62;UBERON:0003082,1.69e-08,62;UBERON:0002384,3.11e-08,371;UBERON:0004573,3.82e-08,33;UBERON:0004571,3.82e-08,33;UBERON:0002385,5.65e-08,64;UBERON:0001015,5.65e-08,64;UBERON:0000383,5.65e-08,64;UBERON:0003102,1.79e-07,99;UBERON:0000992,4.13e-07,13;UBERON:0005256,4.39e-07,122;UBERON:0003688,5.98e-07,6;UBERON:0002358,5.98e-07,6;UBERON:0003684,5.98e-07,6;UBERON:0001178,5.98e-07,6;UBERON:0001637,9.21e-07,42;UBERON:0003509,9.21e-07,42;UBERON:0004572,9.21e-07,42 | |||
|phase1_expression=1.63510541343501,6.85121676451146,1.83240725324762,4.00293193412522,4.46961094427288,9.59572376510406,0,0.631719873426831,0.522371256399677,0,0,0,0,0.123766352960047,0.662794751455832,3.36162573225888,4.21886169616784,2.92124036154949,1.95173119516203,0,0,0,0.572471974262113,0.684372125364421,0.753255837568817,0.152826811495903,0,0.236132343941038,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0.768482119587302,0,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0.329851300186716,0.797854630486527,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.12786256184353,5.06014813338393,1.50401373190767,2.60723734129483,0,0.973269740605272,0.283604451492204,0.886917589850256,0.527008714158756,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,0.531831842075461,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,1.37559020970034,0.626984899610432,0.775250277507987,0,0.33472061276467,0.402829317109147,1.52054421143703,0.24406205754817,0,1.62028389576352,0.535798369704479,0.898117490504679,0.563057402416611,0,0,0.366403487860815,0,0,0,6.95760732373446,0.506522046658319,1.05927344650575,6.88407889797153,2.12801029319014,1.12135520028461,0,2.22000793575444,0.311211035399766,1.21239604862719,1.63461903113459,0.454072282934794,0.576175924479999,0.234321431833797,0.624320153660641,0,1.34503812496621,1.76151747965647,0.971237666208789,1.54495887372473,0.816616685019573,1.47401180774122,0.619954687054593,0,3.21447008062124,0,0.718618141816238,0.336672227908132,1.7516592782075,0,1.31693286264251,3.67785354958824,2.10333282469236,0.680593098960126,5.202299434977,3.63047560991565,3.39091041855299,4.80145753735044,2.16410311400722,2.06112432036503,0.930584281657949,3.20675031258406,3.41029518064195,1.26216887122057,1.01254888506529,1.93975268182574,11.005297368015,3.42557133973977,0.67824236924195,0.386521706326594,0.272746120590835,0.573609190778008,0.121973706129595,0.132529768321485,1.04574548582567,1.45125477021519,1.00928340350251,0,1.56449532329816,3.21620469096443,1.38134921352481,2.3218396401599,2.16563844500876,0.828147600278907,0.168584690078102,1.20505514941741,1.32352767278873,0.653638332277218,1.42362371466658,0.539325232640658,1.17732879075208,0.769494313892781,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0.514703430895577,0.439001141634502,0,0.301586917234893,0.0925884451585296,0,1.03993478527958,0,0.579652024875384,0.821860859650752,0.577465791044295,0,0.761016608938393,0,0,0.492434012174795,0.468008530278475,0.445893486866185,0,0.671928512795438,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0,0,0.380987365753014,0.763976851116555,0,0,1.43958489784653,0.300343057843917,1.42913216315289,0.224262168690721,0.87192013766656,0.8800594298514,2.19761916788222,0,2.535908257668,2.12750493267896,2.08014873822732,0.514414748524284,0,0.266422179016099,1.28680194292333,0.542621605391443,2.46972101034231,0,1.06617584622764,0,0.602878754119172,0.871533458600294,1.89948683245908,1.2162378064119,0.502257091432126,4.21667878966063,1.4377491329495,0,0,2.60606352001643,2.05476322550383,0,0.336255431980582,0.197030760201927,0,0.128343036279748,0.508189248444927,0,0,0.335032530668698,1.27587750330633,0,0,0,1.2269149171914,0,0.813795071099207,2.70362119990049,5.88815663030634,2.52323864054295,1.7571212248907,0.902838299183157,0,1.03473071292505,0.664225598535437,0.184369168541703,1.12948698808508,0.195801157462741,0.686286847621712,0,0,0,0,0,0.30239029332968,0.992431231275107,1.99500565274481,6.17452207752762,2.17836553734692,1.02341449813341,3.37793234401576,1.48418066444991,2.7757744884478,1.06537035187876,0.574890092096664,5.19254429183621,2.90525946149898,0.483437798366489,1.20303882181971,0.644566922551274,1.60740227430449,4.00600569614778,1.96686622439136,0,0.616122696835318,0,0,0.633309773357254,0,0.680374821106063,1.51141141271498,1.54227252690289,0,0,0.509752546090077,0,0,0,0,0.256450125116389,0,0,0.103041011647722,1.19040304263846,0.165018999841176,0,1.95018073810956,3.21367859688319,0.193341436584244,1.54048617114644,1.5350367472613,1.37836572484531,0.537101224341368,1.74020032697074,0.93749290157711,0.445160178233687,0.495854746082934,0.960950336825531,0,0.4046311234222,0.464845549297286,10.0739950985805,0,0.308033580176089,1.59691809095107,0,1.29726953372744,2.71937284809783,0.372158369359667,0.949138274156178,2.85945290885737,0,2.1396949401696,0.318203247925937,3.13979456079692,0.359744915166629,4.66712950551293,1.53156123049392,0.808729926293264,1.58510321173008,2.10629228119491,0.48763373908959,2.19342140668156,3.16950440270266,2.45699840534374,3.67654123079653,2.26016233240486,0,3.3171948762061,3.5076070820301,0.578775534266688,0,0.40582075392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| |||
|short_description=p4@CALU | |||
}} |
Revision as of 23:06, 13 September 2013
Short description: | p4@CALU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CALU_5end |
Coexpression cluster: | C1281_Smooth_Fibroblast_Adipocyte_Olfactory_leiomyoma_Preadipocyte_tenocyte |
Association with transcript: | 0bp_to_ENST00000493278_5end |
EntrezGene: | CALU |
HGNC: | 1458 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.98e-16 | 76 |
multi fate stem cell | 5.76e-15 | 427 |
stem cell | 1.22e-14 | 441 |
somatic stem cell | 3.00e-14 | 433 |
skin fibroblast | 2.16e-09 | 23 |
muscle precursor cell | 7.00e-09 | 58 |
myoblast | 7.00e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.00e-09 | 58 |
smooth muscle cell | 1.02e-08 | 43 |
smooth muscle myoblast | 1.02e-08 | 43 |
muscle cell | 4.61e-08 | 55 |
preadipocyte | 6.07e-08 | 12 |
mesenchymal cell | 7.27e-08 | 354 |
electrically responsive cell | 7.87e-08 | 61 |
electrically active cell | 7.87e-08 | 61 |
connective tissue cell | 1.45e-07 | 361 |
motile cell | 6.77e-07 | 386 |
vascular associated smooth muscle cell | 9.68e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.24e-10 | 73 |
somite | 1.71e-10 | 71 |
presomitic mesoderm | 1.71e-10 | 71 |
presumptive segmental plate | 1.71e-10 | 71 |
dermomyotome | 1.71e-10 | 71 |
trunk paraxial mesoderm | 1.71e-10 | 71 |
paraxial mesoderm | 3.33e-10 | 72 |
presumptive paraxial mesoderm | 3.33e-10 | 72 |
epithelial vesicle | 5.27e-10 | 78 |
skin of body | 6.32e-10 | 41 |
integument | 7.70e-10 | 46 |
integumental system | 7.70e-10 | 46 |
multilaminar epithelium | 3.88e-09 | 83 |
skeletal muscle tissue | 1.69e-08 | 62 |
striated muscle tissue | 1.69e-08 | 62 |
myotome | 1.69e-08 | 62 |
connective tissue | 3.11e-08 | 371 |
systemic artery | 3.82e-08 | 33 |
systemic arterial system | 3.82e-08 | 33 |
muscle tissue | 5.65e-08 | 64 |
musculature | 5.65e-08 | 64 |
musculature of body | 5.65e-08 | 64 |
surface structure | 1.79e-07 | 99 |
female gonad | 4.13e-07 | 13 |
trunk mesenchyme | 4.39e-07 | 122 |
omentum | 5.98e-07 | 6 |
peritoneum | 5.98e-07 | 6 |
abdominal cavity | 5.98e-07 | 6 |
visceral peritoneum | 5.98e-07 | 6 |
artery | 9.21e-07 | 42 |
arterial blood vessel | 9.21e-07 | 42 |
arterial system | 9.21e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.23e-14 | 14 |
reproductive organ cancer | 2.86e-09 | 29 |
female reproductive organ cancer | 3.57e-09 | 27 |
musculoskeletal system disease | 4.39e-07 | 5 |
myotonic disease | 4.39e-07 | 5 |
muscle tissue disease | 4.39e-07 | 5 |
myopathy | 4.39e-07 | 5 |
muscular disease | 4.39e-07 | 5 |
myotonic dystrophy | 4.39e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.