FFCP PHASE1:Hg19::chr7:94034974..94035010,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1278|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=2198|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_uc010lfh.1_5end|coexpression_cluster_id=C59|description=CAGE_peak_10_at_COL1A2_5end|id=chr7:94034974..94035010,+|ontology_enrichment_celltype=CL:0000055!1.42e-42!180;CL:0000057!8.70e-27!75;CL:0000680!1.62e-20!57;CL:0000056!1.62e-20!57;CL:0000355!1.62e-20!57;CL:0000187!1.79e-19!54;CL:0000183!2.38e-19!59;CL:0000393!6.23e-17!60;CL:0000211!6.23e-17!60;CL:0000192!2.82e-16!42;CL:0000514!2.82e-16!42;CL:0000048!3.29e-13!430;CL:0000723!2.89e-12!436;CL:0000359!4.46e-12!32;CL:0000034!2.37e-11!444;CL:0002620!3.39e-10!23;CL:0002371!3.44e-07!591;CL:0002494!3.54e-07!16|ontology_enrichment_celltype_v019=CL:0000187;7.33e-10;55!CL:0000192;2.18e-09;43!CL:0000359;4.01e-09;32!CL:0000057;4.55e-09;73!CL:0002620;1.26e-08;23!CL:0002320;1.40e-08;188!CL:0000134;3.46e-08;55!CL:0002494;4.06e-08;16!CL:0000048;1.43e-07;58!CL:0000723;1.45e-07;61!CL:0000499;2.06e-07;28!CL:0000393;6.45e-07;61!CL:0000211;6.45e-07;61|ontology_enrichment_celltype_v019_2=CL:0000057,1.03e-24,76;CL:0000680,5.49e-18,58;CL:0000056,5.49e-18,58;CL:0000355,5.49e-18,58;CL:0000048,1.62e-17,427;CL:0000187,2.14e-17,55;CL:0000723,1.13e-16,433;CL:0000034,1.35e-15,441;CL:0000192,1.26e-14,43;CL:0000514,1.26e-14,43;CL:0000393,1.98e-14,61;CL:0000211,1.98e-14,61;CL:0000359,1.05e-09,32;CL:0002620,1.40e-08,23;CL:0002494,3.61e-08,16;CL:0002320,5.50e-08,361;CL:0000499,2.40e-07,28;CL:0000134,5.65e-07,354|ontology_enrichment_development_v019=CL:0000514;2.18e-09;43!CL:0000355;1.46e-08;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.41e-23!83;UBERON:0002329!1.41e-23!83;UBERON:0003077!1.41e-23!83;UBERON:0003059!1.41e-23!83;UBERON:0007282!1.41e-23!83;UBERON:0009618!1.41e-23!83;UBERON:0007285!1.41e-23!83;UBERON:0004290!1.91e-21!70;UBERON:0001134!1.19e-20!61;UBERON:0002036!1.19e-20!61;UBERON:0003082!1.19e-20!61;UBERON:0002385!3.92e-20!63;UBERON:0001015!3.92e-20!63;UBERON:0000383!3.92e-20!63;UBERON:0000486!4.59e-17!82;UBERON:0005256!4.19e-13!143;UBERON:0004872!1.24e-10!84;UBERON:0001637!1.89e-09!42;UBERON:0003509!1.89e-09!42;UBERON:0004572!1.89e-09!42;UBERON:0002100!4.19e-09!216;UBERON:0004573!7.39e-09!33;UBERON:0004571!7.39e-09!33;UBERON:0003102!7.26e-08!95;UBERON:0000475!1.11e-07!365;UBERON:0002199!1.48e-07!45;UBERON:0002416!1.48e-07!45;UBERON:0002049!1.65e-07!79;UBERON:0007798!1.65e-07!79;UBERON:0001009!3.50e-07!113;UBERON:0004535!3.66e-07!110;UBERON:0001013!6.28e-07!14;UBERON:0002097!7.38e-07!40;UBERON:0000490!8.74e-07!138|ontology_enrichment_uberon_v019=UBERON:0004457;1.44e-08;9!UBERON:0000042;1.44e-08;9!UBERON:0002385;1.55e-08;31!UBERON:0001015;1.55e-08;31!UBERON:0000383;1.55e-08;31!UBERON:0003688;3.07e-08;6!UBERON:0002358;3.07e-08;6!UBERON:0003684;3.07e-08;6!UBERON:0001178;3.07e-08;6!UBERON:0002384;8.59e-08;198!UBERON:0004573;5.30e-07;33!UBERON:0004571;5.30e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.11e-18,62;UBERON:0002036,1.11e-18,62;UBERON:0003082,1.11e-18,62;UBERON:0007524,2.28e-18,73;UBERON:0002329,5.63e-18,71;UBERON:0003059,5.63e-18,71;UBERON:0007282,5.63e-18,71;UBERON:0004290,5.63e-18,71;UBERON:0009618,5.63e-18,71;UBERON:0002385,1.21e-17,64;UBERON:0001015,1.21e-17,64;UBERON:0000383,1.21e-17,64;UBERON:0003077,1.63e-17,72;UBERON:0007285,1.63e-17,72;UBERON:0000486,3.55e-15,83;UBERON:0007503,5.14e-15,78;UBERON:0005256,1.15e-10,122;UBERON:0003104,2.13e-09,160;UBERON:0009142,2.13e-09,160;UBERON:0003688,3.11e-08,6;UBERON:0002358,3.11e-08,6;UBERON:0003684,3.11e-08,6;UBERON:0001178,3.11e-08,6;UBERON:0002384,3.43e-08,371;UBERON:0002199,4.50e-08,46;UBERON:0002416,4.50e-08,46;UBERON:0004872,1.07e-07,83;UBERON:0001637,1.16e-07,42;UBERON:0003509,1.16e-07,42;UBERON:0004572,1.16e-07,42;UBERON:0002097,1.50e-07,41;UBERON:0004573,1.52e-07,33;UBERON:0004571,1.52e-07,33;UBERON:0000926,3.92e-07,315;UBERON:0004120,3.92e-07,315;UBERON:0006603,3.92e-07,315;UBERON:0000490,3.93e-07,148;UBERON:0003102,7.06e-07,99|phase1_expression=10.1739892391512,15.4152377201508,11.2763523276777,20.0146596706261,10.7270662662549,5.23403114460221,0,3.79031924056099,1.04474251279935,0,0,0,1.31883489114227,0.74259811776028,1.32558950291166,3.36162573225888,2.41077811209591,2.19093027116212,1.95173119516203,1.35433163884467,1.63200552995402,1.25381888591235,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.53435074212236,5.42158728576849,7.52006865953834,5.79386075843295,0,13.1391414981712,0.472674085820339,1.99556457716308,0.614843499851882,0.130979075497713,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,18.3879622127268,3.16576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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1278 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2198 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010lfh.1_5end | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_10_at_COL1A2_5end | |||
|id=chr7:94034974..94035010,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.42e-42!180;CL:0000057!8.70e-27!75;CL:0000680!1.62e-20!57;CL:0000056!1.62e-20!57;CL:0000355!1.62e-20!57;CL:0000187!1.79e-19!54;CL:0000183!2.38e-19!59;CL:0000393!6.23e-17!60;CL:0000211!6.23e-17!60;CL:0000192!2.82e-16!42;CL:0000514!2.82e-16!42;CL:0000048!3.29e-13!430;CL:0000723!2.89e-12!436;CL:0000359!4.46e-12!32;CL:0000034!2.37e-11!444;CL:0002620!3.39e-10!23;CL:0002371!3.44e-07!591;CL:0002494!3.54e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000187;7.33e-10;55!CL:0000192;2.18e-09;43!CL:0000359;4.01e-09;32!CL:0000057;4.55e-09;73!CL:0002620;1.26e-08;23!CL:0002320;1.40e-08;188!CL:0000134;3.46e-08;55!CL:0002494;4.06e-08;16!CL:0000048;1.43e-07;58!CL:0000723;1.45e-07;61!CL:0000499;2.06e-07;28!CL:0000393;6.45e-07;61!CL:0000211;6.45e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.03e-24,76;CL:0000680,5.49e-18,58;CL:0000056,5.49e-18,58;CL:0000355,5.49e-18,58;CL:0000048,1.62e-17,427;CL:0000187,2.14e-17,55;CL:0000723,1.13e-16,433;CL:0000034,1.35e-15,441;CL:0000192,1.26e-14,43;CL:0000514,1.26e-14,43;CL:0000393,1.98e-14,61;CL:0000211,1.98e-14,61;CL:0000359,1.05e-09,32;CL:0002620,1.40e-08,23;CL:0002494,3.61e-08,16;CL:0002320,5.50e-08,361;CL:0000499,2.40e-07,28;CL:0000134,5.65e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;2.18e-09;43!CL:0000355;1.46e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.41e-23!83;UBERON:0002329!1.41e-23!83;UBERON:0003077!1.41e-23!83;UBERON:0003059!1.41e-23!83;UBERON:0007282!1.41e-23!83;UBERON:0009618!1.41e-23!83;UBERON:0007285!1.41e-23!83;UBERON:0004290!1.91e-21!70;UBERON:0001134!1.19e-20!61;UBERON:0002036!1.19e-20!61;UBERON:0003082!1.19e-20!61;UBERON:0002385!3.92e-20!63;UBERON:0001015!3.92e-20!63;UBERON:0000383!3.92e-20!63;UBERON:0000486!4.59e-17!82;UBERON:0005256!4.19e-13!143;UBERON:0004872!1.24e-10!84;UBERON:0001637!1.89e-09!42;UBERON:0003509!1.89e-09!42;UBERON:0004572!1.89e-09!42;UBERON:0002100!4.19e-09!216;UBERON:0004573!7.39e-09!33;UBERON:0004571!7.39e-09!33;UBERON:0003102!7.26e-08!95;UBERON:0000475!1.11e-07!365;UBERON:0002199!1.48e-07!45;UBERON:0002416!1.48e-07!45;UBERON:0002049!1.65e-07!79;UBERON:0007798!1.65e-07!79;UBERON:0001009!3.50e-07!113;UBERON:0004535!3.66e-07!110;UBERON:0001013!6.28e-07!14;UBERON:0002097!7.38e-07!40;UBERON:0000490!8.74e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.44e-08;9!UBERON:0000042;1.44e-08;9!UBERON:0002385;1.55e-08;31!UBERON:0001015;1.55e-08;31!UBERON:0000383;1.55e-08;31!UBERON:0003688;3.07e-08;6!UBERON:0002358;3.07e-08;6!UBERON:0003684;3.07e-08;6!UBERON:0001178;3.07e-08;6!UBERON:0002384;8.59e-08;198!UBERON:0004573;5.30e-07;33!UBERON:0004571;5.30e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.11e-18,62;UBERON:0002036,1.11e-18,62;UBERON:0003082,1.11e-18,62;UBERON:0007524,2.28e-18,73;UBERON:0002329,5.63e-18,71;UBERON:0003059,5.63e-18,71;UBERON:0007282,5.63e-18,71;UBERON:0004290,5.63e-18,71;UBERON:0009618,5.63e-18,71;UBERON:0002385,1.21e-17,64;UBERON:0001015,1.21e-17,64;UBERON:0000383,1.21e-17,64;UBERON:0003077,1.63e-17,72;UBERON:0007285,1.63e-17,72;UBERON:0000486,3.55e-15,83;UBERON:0007503,5.14e-15,78;UBERON:0005256,1.15e-10,122;UBERON:0003104,2.13e-09,160;UBERON:0009142,2.13e-09,160;UBERON:0003688,3.11e-08,6;UBERON:0002358,3.11e-08,6;UBERON:0003684,3.11e-08,6;UBERON:0001178,3.11e-08,6;UBERON:0002384,3.43e-08,371;UBERON:0002199,4.50e-08,46;UBERON:0002416,4.50e-08,46;UBERON:0004872,1.07e-07,83;UBERON:0001637,1.16e-07,42;UBERON:0003509,1.16e-07,42;UBERON:0004572,1.16e-07,42;UBERON:0002097,1.50e-07,41;UBERON:0004573,1.52e-07,33;UBERON:0004571,1.52e-07,33;UBERON:0000926,3.92e-07,315;UBERON:0004120,3.92e-07,315;UBERON:0006603,3.92e-07,315;UBERON:0000490,3.93e-07,148;UBERON:0003102,7.06e-07,99 | |||
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| |||
|short_description=p10@COL1A2 | |||
}} |
Revision as of 02:29, 14 September 2013
Short description: | p10@COL1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_COL1A2_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 0bp_to_uc010lfh.1_5end |
EntrezGene: | COL1A2 |
HGNC: | 2198 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.03e-24 | 76 |
muscle precursor cell | 5.49e-18 | 58 |
myoblast | 5.49e-18 | 58 |
multi-potent skeletal muscle stem cell | 5.49e-18 | 58 |
multi fate stem cell | 1.62e-17 | 427 |
muscle cell | 2.14e-17 | 55 |
somatic stem cell | 1.13e-16 | 433 |
stem cell | 1.35e-15 | 441 |
smooth muscle cell | 1.26e-14 | 43 |
smooth muscle myoblast | 1.26e-14 | 43 |
electrically responsive cell | 1.98e-14 | 61 |
electrically active cell | 1.98e-14 | 61 |
vascular associated smooth muscle cell | 1.05e-09 | 32 |
skin fibroblast | 1.40e-08 | 23 |
cardiocyte | 3.61e-08 | 16 |
connective tissue cell | 5.50e-08 | 361 |
stromal cell | 2.40e-07 | 28 |
mesenchymal cell | 5.65e-07 | 354 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.