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FFCP PHASE1:Mm9::chr6:124707015..124707026,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=13498|HGNC=|UniProt=O35126|association_with_transcript=-473bp_to_ENSMUST00000088357_5end|description=CAGE_peak_11_at_Atn1_5end|id=chr6:124707015..124707026,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!5.09e-12!50;UBERON:0006238!5.09e-12!50;UBERON:0002616!1.68e-11!49;UBERON:0000033!3.71e-11!63;UBERON:0001049!1.03e-09!52;UBERON:0005068!1.03e-09!52;UBERON:0006241!1.03e-09!52;UBERON:0007135!1.03e-09!52;UBERON:0001017!1.04e-09!73;UBERON:0005743!1.04e-09!73;UBERON:0004121!1.05e-09!102;UBERON:0000924!1.05e-09!102;UBERON:0006601!1.05e-09!102;UBERON:0003080!1.72e-09!40;UBERON:0002780!3.26e-09!39;UBERON:0001890!3.26e-09!39;UBERON:0006240!3.26e-09!39;UBERON:0000073!3.27e-09!75;UBERON:0001016!3.27e-09!75;UBERON:0003056!2.19e-08!49;UBERON:0000153!3.47e-08!94;UBERON:0002346!9.47e-08!71;UBERON:0003075!9.47e-08!71;UBERON:0007284!9.47e-08!71;UBERON:0002791!1.19e-07!29;UBERON:0003528!1.19e-07!29;UBERON:0001893!1.19e-07!29;UBERON:0002020!1.35e-07!34;UBERON:0007811!3.65e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000955,3.21e-12,47;UBERON:0006238,3.21e-12,47;UBERON:0002616,1.59e-11,46;UBERON:0001017,2.28e-11,73;UBERON:0000073,5.00e-11,54;UBERON:0001016,1.05e-10,75;UBERON:0004121,1.40e-10,95;UBERON:0000924,1.40e-10,95;UBERON:0006601,1.40e-10,95;UBERON:0003080,2.52e-10,40;UBERON:0002780,6.24e-10,39;UBERON:0001890,6.24e-10,39;UBERON:0006240,6.24e-10,39;UBERON:0010371,1.22e-09,73;UBERON:0003528,1.78e-09,29;UBERON:0002791,1.78e-09,29;UBERON:0001893,1.78e-09,29;UBERON:0001049,4.96e-09,52;UBERON:0005068,4.96e-09,52;UBERON:0006241,4.96e-09,52;UBERON:0007135,4.96e-09,52;UBERON:0003056,3.13e-08,49;UBERON:0002346,2.78e-07,64;UBERON:0003075,2.78e-07,64;UBERON:0007284,2.78e-07,64;UBERON:0002020,4.30e-07,34|phase1_expression=1.44133962394315,0,0,0.60492842261366,0,0.33575854382378,0.233612640595526,0.129123323441576,0.281577444303333,0.468129052643987,0.34243593645101,0.398860794976682,0.342401459862411,0.437102012094987,0,0,0,0.315462165358238,0,0,0.340173160604279,0.397163804803541,0,0,0,0,0.430761996159075,0.646413698057667,0,0,0,1.27006134691926,1.23012957516914,0,0.288851619751275,0.166234645358492,0.612508068787107,0.418531630736908,0,0.523523743973798,0,0,0,1.25896817975577,0.811015449756117,1.10128051297009,11.7358701652206,1.09012578190223,1.75748946187577,1.74986909166855,1.53985063787899,0,0.167782606057736,0.725362142011344,0.336093799142464,0.771778308107841,0.85960031981627,0.515672092277442,1.41621522601718,1.05798195854407,0,1.35537812827653,1.77858959222228,0.899899717281399,1.97773272513395,2.1314403448383,1.19840044207362,0.768436610643109,2.38486108309499,1.08004750665353,1.47227472945967,0.856952953211411,0.883474163806454,1.22490799214954,1.43768206527355,0.919218786610021,1.10115880999389,1.91531007127782,2.15049146558741,1.18697658957174,0.914876436024097,1.56274011167028,1.95428099300967,1.68828783009504,1.83357897332172,0.883885756421003,0.996601765593721,0.559198337475902,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0.421333260395256,1.36344258062446,1.29893002301434,2.82671659608272,1.12674735821344,2.56652954828636,5.09610479413291,7.11066703153331,0.216491041011214,0.506719730950197,0,0.11418387971906,0,0.890652834388949,0.867426633830679,0.304465478312141,0.461230994512117,0.452167921657868,0.940709657085638,0.879666139307728,0,0.289198713839823,0,0.970601099684455,1.10420759230197,0.969750506270444,0,1.17112318804619,0.41889341362691,0,0.239630249011841,0,0.381210681219194,1.19832511523858,1.37250180845588,1.7591609295801,2.08589184230732,1.02286182932132,1.24672826735736,0.973447578406546,0.916554274652847,0.497627882440372,0.252722758433675,0.210441855886474,0.520481771850815,0,0.720248519221397,0.90422890701429,1.15662048557257,1.2811372028485,0.843315521037559,0.517406741478031,1.72454394346274,2.83659120251729,1.75951124163949,1.53437012699302,1.39023624612799,0,1.02891068203972,0.398068533636986,0,0,0,0,0.703578179943289,0.36012412292203,0.473489471170421,0,0.462801338662135,0.465067889500816,0.804820204198858,0.350296027101508,0.493679549740441,0.32833492815819,0.405344047729279,0.292399974850665,0.439100230582101,0.268412837520744,1.26173969138476,1.9551876352064,0,0.528901133327089,0.213288250535234,0.928946687441754,0.77320476793256,0.80673409849337,0.22237804384487,0.570676878337677,0,0.988193728344065,1.00534083520108,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.796565093017469,0.758671603812327,0.456994050438915,0,0.407302655690628,0.193952487167626,0.561086559122548,0.758838445491087,1.32849133181642,0.627994911365499,0.370191491765402,0.889357881261447,0,0.589676985339609,0.224862112384854,0.405720242777006,0.72353147925725,0,0,0.486405680325106,0.274561413188081,4.31304619582064,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,0.369506380333209,0.189491411770485,1.62964976442026,0.848725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|EntrezGene=13498
|HGNC=
|UniProt=O35126
|association_with_transcript=-473bp_to_ENSMUST00000088357_5end
|description=CAGE_peak_11_at_Atn1_5end
|id=chr6:124707015..124707026,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000955,3.21e-12,47;UBERON:0006238,3.21e-12,47;UBERON:0002616,1.59e-11,46;UBERON:0001017,2.28e-11,73;UBERON:0000073,5.00e-11,54;UBERON:0001016,1.05e-10,75;UBERON:0004121,1.40e-10,95;UBERON:0000924,1.40e-10,95;UBERON:0006601,1.40e-10,95;UBERON:0003080,2.52e-10,40;UBERON:0002780,6.24e-10,39;UBERON:0001890,6.24e-10,39;UBERON:0006240,6.24e-10,39;UBERON:0010371,1.22e-09,73;UBERON:0003528,1.78e-09,29;UBERON:0002791,1.78e-09,29;UBERON:0001893,1.78e-09,29;UBERON:0001049,4.96e-09,52;UBERON:0005068,4.96e-09,52;UBERON:0006241,4.96e-09,52;UBERON:0007135,4.96e-09,52;UBERON:0003056,3.13e-08,49;UBERON:0002346,2.78e-07,64;UBERON:0003075,2.78e-07,64;UBERON:0007284,2.78e-07,64;UBERON:0002020,4.30e-07,34
|phase1_expression=1.44133962394315,0,0,0.60492842261366,0,0.33575854382378,0.233612640595526,0.129123323441576,0.281577444303333,0.468129052643987,0.34243593645101,0.398860794976682,0.342401459862411,0.437102012094987,0,0,0,0.315462165358238,0,0,0.340173160604279,0.397163804803541,0,0,0,0,0.430761996159075,0.646413698057667,0,0,0,1.27006134691926,1.23012957516914,0,0.288851619751275,0.166234645358492,0.612508068787107,0.418531630736908,0,0.523523743973798,0,0,0,1.25896817975577,0.811015449756117,1.10128051297009,11.7358701652206,1.09012578190223,1.75748946187577,1.74986909166855,1.53985063787899,0,0.167782606057736,0.725362142011344,0.336093799142464,0.771778308107841,0.85960031981627,0.515672092277442,1.41621522601718,1.05798195854407,0,1.35537812827653,1.77858959222228,0.899899717281399,1.97773272513395,2.1314403448383,1.19840044207362,0.768436610643109,2.38486108309499,1.08004750665353,1.47227472945967,0.856952953211411,0.883474163806454,1.22490799214954,1.43768206527355,0.919218786610021,1.10115880999389,1.91531007127782,2.15049146558741,1.18697658957174,0.914876436024097,1.56274011167028,1.95428099300967,1.68828783009504,1.83357897332172,0.883885756421003,0.996601765593721,0.559198337475902,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0.421333260395256,1.36344258062446,1.29893002301434,2.82671659608272,1.12674735821344,2.56652954828636,5.09610479413291,7.11066703153331,0.216491041011214,0.506719730950197,0,0.11418387971906,0,0.890652834388949,0.867426633830679,0.304465478312141,0.461230994512117,0.452167921657868,0.940709657085638,0.879666139307728,0,0.289198713839823,0,0.970601099684455,1.10420759230197,0.969750506270444,0,1.17112318804619,0.41889341362691,0,0.239630249011841,0,0.381210681219194,1.19832511523858,1.37250180845588,1.7591609295801,2.08589184230732,1.02286182932132,1.24672826735736,0.973447578406546,0.916554274652847,0.497627882440372,0.252722758433675,0.210441855886474,0.520481771850815,0,0.720248519221397,0.90422890701429,1.15662048557257,1.2811372028485,0.843315521037559,0.517406741478031,1.72454394346274,2.83659120251729,1.75951124163949,1.53437012699302,1.39023624612799,0,1.02891068203972,0.398068533636986,0,0,0,0,0.703578179943289,0.36012412292203,0.473489471170421,0,0.462801338662135,0.465067889500816,0.804820204198858,0.350296027101508,0.493679549740441,0.32833492815819,0.405344047729279,0.292399974850665,0.439100230582101,0.268412837520744,1.26173969138476,1.9551876352064,0,0.528901133327089,0.213288250535234,0.928946687441754,0.77320476793256,0.80673409849337,0.22237804384487,0.570676878337677,0,0.988193728344065,1.00534083520108,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.796565093017469,0.758671603812327,0.456994050438915,0,0.407302655690628,0.193952487167626,0.561086559122548,0.758838445491087,1.32849133181642,0.627994911365499,0.370191491765402,0.889357881261447,0,0.589676985339609,0.224862112384854,0.405720242777006,0.72353147925725,0,0,0.486405680325106,0.274561413188081,4.31304619582064,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,0.369506380333209,0.189491411770485,1.62964976442026,0.848725428875941,2.58159273117352,0.670025029767263,0.952174563544055,0.975668239288994,0.788175720530955,0.221464689648775,1.11618338060241,0.491589944147214,0.345369963731791,1.01254341007058,0,0,0.491764273019036,1.10374698521893,0.321101179975584,1.87538698547525,1.63934945376675,0,0,1.17131623288992,0.215423397732799,1.43381278771531,0.222798674082394,0.283076530788832,0,1.16902343164525,0.395287777946524,1.92792789853084,0.99358059645788,1.06839362200353,0.325773918707152,0.989820737835213,0,1.21390318077491,1.209294227859,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0.727067458955011,0.712994756769443,0,1.05418608574999,0,1.36175842301515,0.540183282093931,0.517434735131018,0.857348140126369,0.532020700926821,1.96205699362278,1.81003922662333,2.13125464380219,0.938686832254841,0.21183207086382,0.882113592219848,1.81374878235628,0.968786560175433,2.11095237248546,1.3130957840345,1.31312719796049,0.582961673259701,0.18542530201051,0.512612642393558,1.03193433981611,1.11116716421827,0,0,0.457556346413045,0.169978429993855,0.279902904647316,0.138199973804424,0,1.26534397432454,0.609958401380546,0.540026704109006,0.627264888043406,0.655087691238533,0.944050424693745,0.909188012978695,0,0.259229946583586,0.621339313086926,0.56369293868419,1.04661582230785,0.992750942742586,1.55560950675238,0.904118764344118,0.168956125490778,0.821500670520278,1.0416350787516,0.943734099831398,0.241584120826006,0,0.632022241256357,0.608175645870493,0.513554785824136,0.389762468933385,0.716106782669926,0.39736270956253,0.360586348559907,0.295379054349154,0.100966449948148,0,0.302478555410522,0.38983152295901,0,0.116876902181569,0.453460767230423,0.221985953374065,1.52513556236109,0.167884616364078,0.965947970160952,0.187682475451182,1.09890974560359,1.2862102744744,0.501572104035363,0.564751842617067,0.920650473014354,1.71868654031819,1.71853182343688,3.42541259885321,0,0,0.45032120322422,0.453142408984205,3.10656187051092,1.03787347584177,1.19707462020309,1.02440163452481,1.94485373654635,0.209613162627982,0.551530525350042,0.44449345560323,1.03017528619447,0.64183841918363,1.01078884705519,0,0.565879024158229,1.12369808963859,1.47257850531199,1.03383844120104,0.476293691283074,1.62238056322798,1.35036454324594,1.64834360321323,1.91358596174717,0.685738504770831,0.177475806159338,1.66905332963125,1.30811774969096,0.846984423737976,1.09998990259179,1.28049581010941,0.526139422875686,0.543216455383447,0.561142271657738,0.949080144993393,1.0835493061312,0,0.154936841185966,0.964533054905707,2.24829520144151,0.467863216890817,1.07435527024149,0.57386499620653,1.98532277207564,0.695603506861264
|short_description=p11@Atn1
}}

Revision as of 08:50, 14 September 2013

Short description:p11@Atn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_11_at_Atn1_5end
Coexpression cluster:NA
Association with transcript: -473bp_to_ENSMUST00000088357_5end
EntrezGene:Atn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p11@Atn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H32.11
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain3.21e-1247
future brain3.21e-1247
regional part of brain1.59e-1146
central nervous system2.28e-1173
regional part of nervous system5.00e-1154
nervous system1.05e-1075
ectoderm-derived structure1.40e-1095
ectoderm1.40e-1095
presumptive ectoderm1.40e-1095
anterior neural tube2.52e-1040
regional part of forebrain6.24e-1039
forebrain6.24e-1039
future forebrain6.24e-1039
ecto-epithelium1.22e-0973
brain grey matter1.78e-0929
regional part of telencephalon1.78e-0929
telencephalon1.78e-0929
neural tube4.96e-0952
neural rod4.96e-0952
future spinal cord4.96e-0952
neural keel4.96e-0952
pre-chordal neural plate3.13e-0849
neurectoderm2.78e-0764
neural plate2.78e-0764
presumptive neural plate2.78e-0764
gray matter4.30e-0734







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