FFCP PHASE1:Hg19::chrX:135863381..135863425,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9459|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=685|TSSclassifier=S|UniProt=F5H8B2,Q15052,Q8N4Q3|association_with_transcript=77bp_to_ENST00000535736,NM_004840,uc004fab.2_5end|coexpression_cluster_id=C29|description=CAGE_peak_5_at_ARHGEF6_5end|id=chrX:135863381..135863425,-|ontology_enrichment_celltype=CL:0000037!1.28e-56!172;CL:0000566!1.28e-56!172;CL:0002032!1.25e-51!165;CL:0000837!1.25e-51!165;CL:0000988!5.74e-50!182;CL:0000738!4.30e-43!140;CL:0002087!1.26e-36!119;CL:0002031!1.12e-35!124;CL:0000763!7.63e-34!112;CL:0000049!7.63e-34!112;CL:0000766!8.34e-24!76;CL:0000557!1.46e-20!71;CL:0000839!2.64e-20!70;CL:0002057!3.70e-20!42;CL:0002194!5.03e-19!63;CL:0000576!5.03e-19!63;CL:0000040!5.03e-19!63;CL:0000559!5.03e-19!63;CL:0002009!1.07e-18!65;CL:0000860!1.35e-17!45;CL:0000542!2.54e-15!53;CL:0000051!2.54e-15!53;CL:0000838!4.17e-15!52;CL:0000084!5.32e-11!25;CL:0000827!5.32e-11!25;CL:0000134!4.90e-10!358;CL:0002320!5.62e-09!365;CL:0000791!1.78e-07!18;CL:0000789!1.78e-07!18;CL:0002420!1.78e-07!18;CL:0002419!1.78e-07!18;CL:0000790!1.78e-07!18;CL:0000219!5.26e-07!390|ontology_enrichment_celltype_v019=CL:0000860;1.27e-16;33!CL:0002057;1.27e-16;33!CL:0000576;1.82e-16;48!CL:0000763;6.81e-15;100!CL:0000473;1.46e-14;39!CL:0000234;1.46e-14;39!CL:0000766;3.03e-14;69!CL:0002087;3.28e-12;104!CL:0000738;8.13e-11;136!CL:0000988;4.10e-10;177!CL:0000084;1.55e-09;25!CL:0000542;1.17e-07;53|ontology_enrichment_celltype_v019_2=CL:0000037,2.15e-60,168;CL:0000988,4.59e-55,177;CL:0002032,2.86e-54,161;CL:0000837,2.86e-54,161;CL:0000738,9.39e-45,136;CL:0000763,3.61e-40,108;CL:0000049,3.61e-40,108;CL:0002087,4.42e-38,115;CL:0002031,2.62e-35,120;CL:0000766,2.26e-29,72;CL:0000473,2.33e-25,48;CL:0000234,2.33e-25,48;CL:0000860,2.85e-25,42;CL:0002057,2.85e-25,42;CL:0000557,4.03e-25,67;CL:0002194,1.01e-23,59;CL:0000576,1.01e-23,59;CL:0000040,1.01e-23,59;CL:0000559,1.01e-23,59;CL:0002009,1.83e-23,61;CL:0000839,2.49e-23,66;CL:0000542,2.38e-12,53;CL:0000051,2.38e-12,53;CL:0000838,4.48e-12,52;CL:0000134,7.59e-12,354;CL:0002320,5.92e-11,361;CL:0000084,1.19e-09,25;CL:0000827,1.19e-09,25;CL:0000219,2.06e-08,386;CL:0002393,4.09e-08,9;CL:0002397,4.09e-08,9|ontology_enrichment_development_v019=CL:0002057;1.08e-17;42!CL:0000049;1.22e-12;108!CL:0000051;1.17e-07;53|ontology_enrichment_disease=DOID:1240!1.94e-15!39;DOID:2531!9.05e-15!51;DOID:0060083!9.05e-15!51;DOID:8692!3.03e-11!31|ontology_enrichment_disease_v019=DOID:1240;1.19e-14;39!DOID:8692;9.52e-13;31!DOID:2531;2.02e-11;51!DOID:0060083;2.02e-11;51|ontology_enrichment_disease_v019_2=DOID:1240,6.95e-19,39;DOID:2531,1.68e-18,51;DOID:0060083,1.68e-18,51;DOID:8692,1.97e-13,31|ontology_enrichment_uberon=UBERON:0002390!6.10e-23!102;UBERON:0003061!6.10e-23!102;UBERON:0007023!1.05e-20!115;UBERON:0002193!5.01e-20!112;UBERON:0002371!3.65e-17!80;UBERON:0001474!2.06e-15!86;UBERON:0002405!8.89e-12!115;UBERON:0004765!1.30e-10!101;UBERON:0001434!1.30e-10!101;UBERON:0002384!3.82e-09!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.29e-29,98;UBERON:0003061,7.29e-29,98;UBERON:0002193,5.81e-24,108;UBERON:0002371,2.88e-21,76;UBERON:0002405,7.27e-19,93;UBERON:0001474,2.13e-18,82;UBERON:0004765,3.14e-15,90;UBERON:0001434,4.49e-12,100;UBERON:0002384,1.03e-10,371;UBERON:0007023,1.67e-09,114;UBERON:0003081,7.29e-07,203|phase1_expression=0,0.856402095563933,1.83240725324762,0,0.446961094427288,0,5.06599756336621,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.985207073399349,0.629686250509434,3.14691421479123,4.22212337906934,4.95411594611443,0,0,0,0.0774672005803016,2.98555388223585,5.28480790802725,8.30993112797816,4.21143339687298,3.47217393145363,1.34349284543955,1.6194683300949,3.09090681161024,1.89017710413434,3.02300754951048,1.4555043671269,3.25400651667958,2.46700732813095,0.619412741790207,1.7261543539329,4.09857130446561,2.60130452877444,3.10271112662957,3.22742341791913,0,2.63539275359647,1.63743690034707,1.12361742222542,3.67300670845083,3.20929027076094,4.47535988059329,2.96866170168044,3.98927315243264,1.70489900213078,1.45104619314292,1.70215567407342,1.24564449799115,3.26623264833766,3.12889751052121,3.9093992046921,1.81619850790011,2.94622108790052,2.21523671208619,3.59133986730301,3.61427309940574,2.51590374610051,8.76163322942662,9.91167492753942,9.00063285503649,2.85012743741249,4.17725022118089,1.82664153764634,3.51992488922645,0.546138611262131,1.77901850772711,1.70692089026603,4.00395987036012,1.72425731986345,1.98313461835459,2.86216126360609,0,1.76171156811282,1.14681968437569,1.32171328579026,1.12101712596307,2.89722493252585,4.32761494250433,2.35806457649499,2.46721798799411,2.17342444007882,2.93330039970231,0.946895611469467,1.94826728407911,3.89936599098108,0.589211814949674,0.664601683750863,1.62482318259009,1.66518715643378,2.21100890851793,4.76869923350661,3.59255023121603,5.79606171470105,6.52460877913066,6.68852070224283,3.1360657141493,4.87230173599535,2.29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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9459 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=685 | |||
|TSSclassifier=S | |||
|UniProt=F5H8B2,Q15052,Q8N4Q3 | |||
|association_with_transcript=77bp_to_ENST00000535736,NM_004840,uc004fab.2_5end | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_5_at_ARHGEF6_5end | |||
|id=chrX:135863381..135863425,- | |||
|ontology_enrichment_celltype=CL:0000037!1.28e-56!172;CL:0000566!1.28e-56!172;CL:0002032!1.25e-51!165;CL:0000837!1.25e-51!165;CL:0000988!5.74e-50!182;CL:0000738!4.30e-43!140;CL:0002087!1.26e-36!119;CL:0002031!1.12e-35!124;CL:0000763!7.63e-34!112;CL:0000049!7.63e-34!112;CL:0000766!8.34e-24!76;CL:0000557!1.46e-20!71;CL:0000839!2.64e-20!70;CL:0002057!3.70e-20!42;CL:0002194!5.03e-19!63;CL:0000576!5.03e-19!63;CL:0000040!5.03e-19!63;CL:0000559!5.03e-19!63;CL:0002009!1.07e-18!65;CL:0000860!1.35e-17!45;CL:0000542!2.54e-15!53;CL:0000051!2.54e-15!53;CL:0000838!4.17e-15!52;CL:0000084!5.32e-11!25;CL:0000827!5.32e-11!25;CL:0000134!4.90e-10!358;CL:0002320!5.62e-09!365;CL:0000791!1.78e-07!18;CL:0000789!1.78e-07!18;CL:0002420!1.78e-07!18;CL:0002419!1.78e-07!18;CL:0000790!1.78e-07!18;CL:0000219!5.26e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-16;33!CL:0002057;1.27e-16;33!CL:0000576;1.82e-16;48!CL:0000763;6.81e-15;100!CL:0000473;1.46e-14;39!CL:0000234;1.46e-14;39!CL:0000766;3.03e-14;69!CL:0002087;3.28e-12;104!CL:0000738;8.13e-11;136!CL:0000988;4.10e-10;177!CL:0000084;1.55e-09;25!CL:0000542;1.17e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.15e-60,168;CL:0000988,4.59e-55,177;CL:0002032,2.86e-54,161;CL:0000837,2.86e-54,161;CL:0000738,9.39e-45,136;CL:0000763,3.61e-40,108;CL:0000049,3.61e-40,108;CL:0002087,4.42e-38,115;CL:0002031,2.62e-35,120;CL:0000766,2.26e-29,72;CL:0000473,2.33e-25,48;CL:0000234,2.33e-25,48;CL:0000860,2.85e-25,42;CL:0002057,2.85e-25,42;CL:0000557,4.03e-25,67;CL:0002194,1.01e-23,59;CL:0000576,1.01e-23,59;CL:0000040,1.01e-23,59;CL:0000559,1.01e-23,59;CL:0002009,1.83e-23,61;CL:0000839,2.49e-23,66;CL:0000542,2.38e-12,53;CL:0000051,2.38e-12,53;CL:0000838,4.48e-12,52;CL:0000134,7.59e-12,354;CL:0002320,5.92e-11,361;CL:0000084,1.19e-09,25;CL:0000827,1.19e-09,25;CL:0000219,2.06e-08,386;CL:0002393,4.09e-08,9;CL:0002397,4.09e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-17;42!CL:0000049;1.22e-12;108!CL:0000051;1.17e-07;53 | |||
|ontology_enrichment_disease=DOID:1240!1.94e-15!39;DOID:2531!9.05e-15!51;DOID:0060083!9.05e-15!51;DOID:8692!3.03e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.19e-14;39!DOID:8692;9.52e-13;31!DOID:2531;2.02e-11;51!DOID:0060083;2.02e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,6.95e-19,39;DOID:2531,1.68e-18,51;DOID:0060083,1.68e-18,51;DOID:8692,1.97e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.10e-23!102;UBERON:0003061!6.10e-23!102;UBERON:0007023!1.05e-20!115;UBERON:0002193!5.01e-20!112;UBERON:0002371!3.65e-17!80;UBERON:0001474!2.06e-15!86;UBERON:0002405!8.89e-12!115;UBERON:0004765!1.30e-10!101;UBERON:0001434!1.30e-10!101;UBERON:0002384!3.82e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.29e-29,98;UBERON:0003061,7.29e-29,98;UBERON:0002193,5.81e-24,108;UBERON:0002371,2.88e-21,76;UBERON:0002405,7.27e-19,93;UBERON:0001474,2.13e-18,82;UBERON:0004765,3.14e-15,90;UBERON:0001434,4.49e-12,100;UBERON:0002384,1.03e-10,371;UBERON:0007023,1.67e-09,114;UBERON:0003081,7.29e-07,203 | |||
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| |||
|short_description=p5@ARHGEF6 | |||
}} |
Revision as of 10:53, 14 September 2013
Short description: | p5@ARHGEF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ARHGEF6_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 77bp_to_ENST00000535736, NM_004840, uc004fab.2_5end |
EntrezGene: | ARHGEF6 |
HGNC: | 685 |
UniProt: | F5H8B2Q15052Q8N4Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.29e-29 | 98 |
blood island | 7.29e-29 | 98 |
hemolymphoid system | 5.81e-24 | 108 |
bone marrow | 2.88e-21 | 76 |
immune system | 7.27e-19 | 93 |
bone element | 2.13e-18 | 82 |
skeletal element | 3.14e-15 | 90 |
skeletal system | 4.49e-12 | 100 |
connective tissue | 1.03e-10 | 371 |
adult organism | 1.67e-09 | 114 |
lateral plate mesoderm | 7.29e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
leukemia | 6.95e-19 | 39 |
hematologic cancer | 1.68e-18 | 51 |
immune system cancer | 1.68e-18 | 51 |
myeloid leukemia | 1.97e-13 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.