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FFCP PHASE1:Mm9::chr7:133647097..133647108,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=233871|HGNC=|UniProt=Q7TQH0,E9Q5Q0|association_with_transcript=-281bp_to_ENSMUST00000040202,ENSMUST00000166682,NM_183020,uc009jrs.1,uc009jru.1_5end|description=CAGE_peak_9_at_Atxn2l_5end|id=chr7:133647097..133647108,-|ontology_enrichment_celltype=CL:0000117!5.30e-07!23;CL:0000337!5.30e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-07,23;CL:0000337,2.22e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.95e-12!73;UBERON:0005743!4.95e-12!73;UBERON:0001049!1.67e-11!52;UBERON:0005068!1.67e-11!52;UBERON:0006241!1.67e-11!52;UBERON:0007135!1.67e-11!52;UBERON:0002020!8.52e-11!34;UBERON:0000073!8.59e-11!75;UBERON:0001016!8.59e-11!75;UBERON:0000955!2.31e-10!50;UBERON:0006238!2.31e-10!50;UBERON:0003080!2.44e-10!40;UBERON:0002780!6.98e-10!39;UBERON:0001890!6.98e-10!39;UBERON:0006240!6.98e-10!39;UBERON:0003056!8.01e-10!49;UBERON:0002616!8.15e-10!49;UBERON:0002791!9.82e-10!29;UBERON:0003528!9.82e-10!29;UBERON:0001893!9.82e-10!29;UBERON:0002346!1.26e-08!71;UBERON:0003075!1.26e-08!71;UBERON:0007284!1.26e-08!71;UBERON:0000956!3.34e-08!21;UBERON:0001869!3.34e-08!21;UBERON:0000203!3.34e-08!21;UBERON:0000033!3.65e-08!63|ontology_enrichment_uberon_v019_2=UBERON:0003080,3.10e-12,40;UBERON:0002020,3.82e-12,34;UBERON:0000955,6.02e-12,47;UBERON:0006238,6.02e-12,47;UBERON:0001049,8.99e-12,52;UBERON:0005068,8.99e-12,52;UBERON:0006241,8.99e-12,52;UBERON:0007135,8.99e-12,52;UBERON:0001017,9.18e-12,73;UBERON:0002780,1.15e-11,39;UBERON:0001890,1.15e-11,39;UBERON:0006240,1.15e-11,39;UBERON:0000073,2.20e-11,54;UBERON:0003528,2.86e-11,29;UBERON:0002791,2.86e-11,29;UBERON:0001893,2.86e-11,29;UBERON:0002616,2.90e-11,46;UBERON:0003056,3.24e-11,49;UBERON:0001016,5.70e-11,75;UBERON:0002346,1.05e-10,64;UBERON:0003075,1.05e-10,64;UBERON:0007284,1.05e-10,64;UBERON:0000956,2.72e-10,21;UBERON:0001869,2.72e-10,21;UBERON:0000203,2.72e-10,21;UBERON:0010371,1.94e-08,73;UBERON:0004121,2.80e-08,95;UBERON:0000924,2.80e-08,95;UBERON:0006601,2.80e-08,95;UBERON:0002619,1.93e-07,17|phase1_expression=0.320297694209588,0,0.454999239389536,0,0.500895729946347,0.33575854382378,0,0.516493293766305,0.563154888606667,0.468129052643987,0.68487187290202,0.797721589953364,0.171200729931206,0.174840804837995,1.33243904726265,1.01237633694913,1.39912375625629,0.473193248037357,0.548457734422955,0,1.61582251287033,0.198581902401771,0.522399578277871,0.799962113967033,0,0.57423196411502,0,0,0,0.504060259519861,0,2.54012269383853,3.07532393792285,0,0.577703239502549,0.166234645358492,0,0.418531630736908,0,1.0470474879476,0.588231488031014,0.683045484958446,0.485510353031154,0.251793635951155,0.608261587317087,0.734187008646726,3.12956537739216,0.65407546914134,1.31811709640683,1.1665793944457,1.39986421625363,4.31257693094915,0.335565212115473,0.725362142011344,0.672187598284928,0.514518872071894,1.43266719969378,0.515672092277442,1.01158230429799,3.70293685490423,5.07065122804943,0.338844532069132,0.889294796111139,0.449949858640699,0.988866362566974,1.4209602298922,0.898800331555214,1.15265491596466,2.7996195323289,3.51015439662396,3.15487442027073,0.856952953211411,1.76694832761291,2.69479758272899,2.30029130443767,8.27296907949019,1.10115880999389,0.638436690425939,0.614426133024974,2.63772575460388,2.74462930807229,2.6045668527838,0.837548997004143,1.68828783009504,0.45839474333043,1.76777151284201,1.13897344639282,1.4911955666024,0.151452386666368,0.151143120213571,0,0,1.3599426674155,1.61910957491345,0,0.896053774194671,0.280888840263504,0,0.519572009205738,0.35333957451034,0.563373679106722,1.28326477414318,0,0,0.432982082022428,0,1.51657333504435,0.34255163915718,1.03575153458869,0.148442139064825,0.867426633830679,0.608930956624282,0.461230994512117,0.60289056221049,0.470354828542819,0.376999773989026,0,1.15679485535929,1.76922110389975,0.808834249737046,1.54589062922275,0.969750506270444,0,3.22058876712702,0.83778682725382,0,1.55759661857696,0.599902730993408,0.381210681219194,1.79748767285787,0.915001205637253,4.14659361972453,2.43354048269187,1.79000820131231,1.66230435647648,1.78465389374533,1.01839363850316,1.11966273549084,0.758168275301024,1.05220927943237,0.910843100738926,0.459804208866946,0.360124259610698,0.753524089178575,1.08858398642125,1.5373646434182,1.3118241438362,1.55222022443409,0.431135985865684,0.756424320671277,1.05570674498369,1.09597866213787,1.11218899690239,1.39300866608867,1.23469281844766,0.796137067273973,0,0,0.284163499395593,1.24275463521301,1.17263029990548,0.900310307305074,0.23674473558521,1.18058539048442,0.462801338662135,0.697601834251224,0.804820204198858,0.817357396570186,0.329119699826961,0.492502392237286,0.729619285912702,0.730999937126662,0.219550115291051,0.536825675041487,1.47202963994889,2.6755199218614,1.32167513193519,0.528901133327089,0.639864751605702,0.464473343720877,0.77320476793256,0.80673409849337,0.889512175379481,0.951128130562796,0,0.329397909448022,0,0.795825888164603,0,1.79763881730844,1.08069024937347,0.9957063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|EntrezGene=233871
|HGNC=
|UniProt=Q7TQH0,E9Q5Q0
|association_with_transcript=-281bp_to_ENSMUST00000040202,ENSMUST00000166682,NM_183020,uc009jrs.1,uc009jru.1_5end
|description=CAGE_peak_9_at_Atxn2l_5end
|id=chr7:133647097..133647108,-
|ontology_enrichment_celltype=CL:0000117!5.30e-07!23;CL:0000337!5.30e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-07,23;CL:0000337,2.22e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.95e-12!73;UBERON:0005743!4.95e-12!73;UBERON:0001049!1.67e-11!52;UBERON:0005068!1.67e-11!52;UBERON:0006241!1.67e-11!52;UBERON:0007135!1.67e-11!52;UBERON:0002020!8.52e-11!34;UBERON:0000073!8.59e-11!75;UBERON:0001016!8.59e-11!75;UBERON:0000955!2.31e-10!50;UBERON:0006238!2.31e-10!50;UBERON:0003080!2.44e-10!40;UBERON:0002780!6.98e-10!39;UBERON:0001890!6.98e-10!39;UBERON:0006240!6.98e-10!39;UBERON:0003056!8.01e-10!49;UBERON:0002616!8.15e-10!49;UBERON:0002791!9.82e-10!29;UBERON:0003528!9.82e-10!29;UBERON:0001893!9.82e-10!29;UBERON:0002346!1.26e-08!71;UBERON:0003075!1.26e-08!71;UBERON:0007284!1.26e-08!71;UBERON:0000956!3.34e-08!21;UBERON:0001869!3.34e-08!21;UBERON:0000203!3.34e-08!21;UBERON:0000033!3.65e-08!63
|ontology_enrichment_uberon_v019_2=UBERON:0003080,3.10e-12,40;UBERON:0002020,3.82e-12,34;UBERON:0000955,6.02e-12,47;UBERON:0006238,6.02e-12,47;UBERON:0001049,8.99e-12,52;UBERON:0005068,8.99e-12,52;UBERON:0006241,8.99e-12,52;UBERON:0007135,8.99e-12,52;UBERON:0001017,9.18e-12,73;UBERON:0002780,1.15e-11,39;UBERON:0001890,1.15e-11,39;UBERON:0006240,1.15e-11,39;UBERON:0000073,2.20e-11,54;UBERON:0003528,2.86e-11,29;UBERON:0002791,2.86e-11,29;UBERON:0001893,2.86e-11,29;UBERON:0002616,2.90e-11,46;UBERON:0003056,3.24e-11,49;UBERON:0001016,5.70e-11,75;UBERON:0002346,1.05e-10,64;UBERON:0003075,1.05e-10,64;UBERON:0007284,1.05e-10,64;UBERON:0000956,2.72e-10,21;UBERON:0001869,2.72e-10,21;UBERON:0000203,2.72e-10,21;UBERON:0010371,1.94e-08,73;UBERON:0004121,2.80e-08,95;UBERON:0000924,2.80e-08,95;UBERON:0006601,2.80e-08,95;UBERON:0002619,1.93e-07,17
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0.500895729946347,0.33575854382378,0,0.516493293766305,0.563154888606667,0.468129052643987,0.68487187290202,0.797721589953364,0.171200729931206,0.174840804837995,1.33243904726265,1.01237633694913,1.39912375625629,0.473193248037357,0.548457734422955,0,1.61582251287033,0.198581902401771,0.522399578277871,0.799962113967033,0,0.57423196411502,0,0,0,0.504060259519861,0,2.54012269383853,3.07532393792285,0,0.577703239502549,0.166234645358492,0,0.418531630736908,0,1.0470474879476,0.588231488031014,0.683045484958446,0.485510353031154,0.251793635951155,0.608261587317087,0.734187008646726,3.12956537739216,0.65407546914134,1.31811709640683,1.1665793944457,1.39986421625363,4.31257693094915,0.335565212115473,0.725362142011344,0.672187598284928,0.514518872071894,1.43266719969378,0.515672092277442,1.01158230429799,3.70293685490423,5.07065122804943,0.338844532069132,0.889294796111139,0.449949858640699,0.988866362566974,1.4209602298922,0.898800331555214,1.15265491596466,2.7996195323289,3.51015439662396,3.15487442027073,0.856952953211411,1.76694832761291,2.69479758272899,2.30029130443767,8.27296907949019,1.10115880999389,0.638436690425939,0.614426133024974,2.63772575460388,2.74462930807229,2.6045668527838,0.837548997004143,1.68828783009504,0.45839474333043,1.76777151284201,1.13897344639282,1.4911955666024,0.151452386666368,0.151143120213571,0,0,1.3599426674155,1.61910957491345,0,0.896053774194671,0.280888840263504,0,0.519572009205738,0.35333957451034,0.563373679106722,1.28326477414318,0,0,0.432982082022428,0,1.51657333504435,0.34255163915718,1.03575153458869,0.148442139064825,0.867426633830679,0.608930956624282,0.461230994512117,0.60289056221049,0.470354828542819,0.376999773989026,0,1.15679485535929,1.76922110389975,0.808834249737046,1.54589062922275,0.969750506270444,0,3.22058876712702,0.83778682725382,0,1.55759661857696,0.599902730993408,0.381210681219194,1.79748767285787,0.915001205637253,4.14659361972453,2.43354048269187,1.79000820131231,1.66230435647648,1.78465389374533,1.01839363850316,1.11966273549084,0.758168275301024,1.05220927943237,0.910843100738926,0.459804208866946,0.360124259610698,0.753524089178575,1.08858398642125,1.5373646434182,1.3118241438362,1.55222022443409,0.431135985865684,0.756424320671277,1.05570674498369,1.09597866213787,1.11218899690239,1.39300866608867,1.23469281844766,0.796137067273973,0,0,0.284163499395593,1.24275463521301,1.17263029990548,0.900310307305074,0.23674473558521,1.18058539048442,0.462801338662135,0.697601834251224,0.804820204198858,0.817357396570186,0.329119699826961,0.492502392237286,0.729619285912702,0.730999937126662,0.219550115291051,0.536825675041487,1.47202963994889,2.6755199218614,1.32167513193519,0.528901133327089,0.639864751605702,0.464473343720877,0.77320476793256,0.80673409849337,0.889512175379481,0.951128130562796,0,0.329397909448022,0,0.795825888164603,0,1.79763881730844,1.08069024937347,0.995706366271836,0.758671603812327,0.913988100877831,2.25415471346161,0.407302655690628,0.775809948670503,0.350679099451593,0.569128834118316,0.590440591918409,0.470996183524124,0.123397163921801,0.889357881261447,0.500535317148282,0.786235980452812,1.12431056192427,0.811440485554012,0.482354319504834,0.50925170356284,1.72617682470486,1.45921704097532,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.923765950833023,0.568474235311454,0.488894929326078,1.52770577197669,1.17345124144251,1.50755631697634,1.19021820443007,0.780534591431195,0.630540576424764,1.10732344824387,1.43509291791738,0.81931657357869,0.518054945597687,0.144649058581512,0,1.08781136763742,0,1.10374698521893,0.642202359951168,0.820481806145422,0.327869890753351,1.76729649043061,1.57754109708128,0.780877488593277,0.646270193198397,0.955875191810208,1.78238939265915,1.41538265394416,0.809621403349789,0.292255857911312,0,3.85585579706168,0.851640511249612,1.06839362200353,1.14020871547503,1.31976098378028,0,2.18502572539483,0.302323556964751,1.13163047853539,1.18120757152309,2.45948118355142,0.516856586336442,1.45413491791002,0.712994756769443,0.316036757935816,1.05418608574999,2.06271086496374,0.340439605753788,1.08036656418786,1.29358683782755,0.428674070063185,0.709360934569094,1.60531935841864,1.48094118541909,1.2178597964584,0.704015124191131,0.847328283455281,1.32317038832977,1.15420377059036,0.807322133479528,0.603129249281559,0.596861720015682,0.656563598980245,0.291480836629851,0.927126510052548,0.854354403989263,0.82554747185289,0.925972636848558,0.188368457004691,0.27338845544205,0.457556346413045,0.339956859987711,0.979660166265606,1.10559979043539,0.954670618015114,1.26534397432454,1.42323626988794,1.08005340821801,0.418176592028937,0.655087691238533,0.539457385539283,0.909188012978695,0.785267825952089,0.388844919875379,0,1.12738587736838,0.897099276263873,0.496375471371293,0.777804753376191,1.03327858782185,0.675824501963113,1.29092962510329,0.911430693907651,1.8874681996628,1.44950472495604,4.03242008761012,1.58005560314089,0.405450430580328,0.410843828659309,0.51968329191118,1.61124026100733,1.39076948346885,1.20195449519969,1.18151621739662,0.908698049533329,1.37172251979,0.907435666231565,1.07203668813728,1.25075394132428,1.05189211963412,0.453460767230423,0.443971906748129,0.448569283047378,0,0.772758376128762,0.375364950902364,1.46521299413812,1.2862102744744,1.00314420807073,1.6942555278512,1.84130094602871,4.01026859407578,4.29632955859219,0.685082519770642,3.0215755895588,1.35004500046361,2.2516060161211,0,1.03552062350364,0.726511433089237,0.399024873401031,1.19513524027894,1.45864030240976,0.209613162627982,1.10306105070008,2.22246727801615,1.64828045791115,1.28367683836726,1.01078884705519,1.2673964994512,2.07488975524684,1.03005658216871,1.60062881012173,0.918967503289812,0.952587382566147,0.695305955669133,0.77163688185482,0.412085900803307,0.588795680537589,1.02860775715625,1.77475806159337,0.953744759789284,1.16277133305863,0.941093804153306,1.60767754994185,1.46342378298218,1.31534855718921,1.35804113845862,0,1.77952527186261,0.591026894253381,2.04615521584845,2.01417893541756,0.578719832943424,1.74867404556562,1.40358965067245,0.214871054048298,1.53030665655075,0.882365676478062,0.463735671240843
|short_description=p9@Atxn2l
}}

Revision as of 11:48, 14 September 2013

Short description:p9@Atxn2l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Atxn2l_5end
Coexpression cluster:NA
Association with transcript: -281bp_to_ENSMUST00000040202, ENSMUST00000166682, NM_183020, uc009jrs.1, uc009jru.1_5end
EntrezGene:Atxn2l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Atxn2l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F14.15
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.22e-0723
neuroblast (sensu Vertebrata)2.22e-0723

Uber anatomy
Ontology termp-valuen
anterior neural tube3.10e-1240
gray matter3.82e-1234
brain6.02e-1247
future brain6.02e-1247
neural tube8.99e-1252
neural rod8.99e-1252
future spinal cord8.99e-1252
neural keel8.99e-1252
central nervous system9.18e-1273
regional part of forebrain1.15e-1139
forebrain1.15e-1139
future forebrain1.15e-1139
regional part of nervous system2.20e-1154
brain grey matter2.86e-1129
regional part of telencephalon2.86e-1129
telencephalon2.86e-1129
regional part of brain2.90e-1146
pre-chordal neural plate3.24e-1149
nervous system5.70e-1175
neurectoderm1.05e-1064
neural plate1.05e-1064
presumptive neural plate1.05e-1064
cerebral cortex2.72e-1021
cerebral hemisphere2.72e-1021
pallium2.72e-1021
ecto-epithelium1.94e-0873
ectoderm-derived structure2.80e-0895
ectoderm2.80e-0895
presumptive ectoderm2.80e-0895
regional part of cerebral cortex1.93e-0717







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