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FFCP PHASE1:Mm9::chr7:27963833..27963848,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=19342|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000134462,ENSMUST00000141906_5end|description=CAGE_peak_2_at_Rab4b_5end|id=chr7:27963833..27963848,-|ontology_enrichment_celltype=CL:0000117!5.02e-08!23;CL:0000337!5.02e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.67e-08,23;CL:0000337,1.67e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.59e-13!52;UBERON:0005068!2.59e-13!52;UBERON:0006241!2.59e-13!52;UBERON:0007135!2.59e-13!52;UBERON:0007811!2.91e-13!86;UBERON:0001017!5.13e-13!73;UBERON:0005743!5.13e-13!73;UBERON:0000073!4.29e-12!75;UBERON:0001016!4.29e-12!75;UBERON:0000955!1.11e-11!50;UBERON:0006238!1.11e-11!50;UBERON:0002616!2.51e-11!49;UBERON:0000153!2.78e-11!94;UBERON:0000033!1.85e-09!63;UBERON:0002020!1.86e-09!34;UBERON:0002346!7.81e-09!71;UBERON:0003075!7.81e-09!71;UBERON:0007284!7.81e-09!71;UBERON:0003080!1.14e-08!40;UBERON:0002780!3.22e-08!39;UBERON:0001890!3.22e-08!39;UBERON:0006240!3.22e-08!39;UBERON:0002791!3.24e-07!29;UBERON:0003528!3.24e-07!29;UBERON:0001893!3.24e-07!29;UBERON:0004121!3.74e-07!102;UBERON:0000924!3.74e-07!102;UBERON:0006601!3.74e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.08e-15,54;UBERON:0001049,1.41e-14,52;UBERON:0005068,1.41e-14,52;UBERON:0006241,1.41e-14,52;UBERON:0007135,1.41e-14,52;UBERON:0001017,3.67e-14,73;UBERON:0001016,3.88e-13,75;UBERON:0000955,1.05e-11,47;UBERON:0006238,1.05e-11,47;UBERON:0002616,2.58e-11,46;UBERON:0002346,3.01e-11,64;UBERON:0003075,3.01e-11,64;UBERON:0007284,3.01e-11,64;UBERON:0002020,9.73e-11,34;UBERON:0003080,2.20e-09,40;UBERON:0004121,5.56e-09,95;UBERON:0000924,5.56e-09,95;UBERON:0006601,5.56e-09,95;UBERON:0002780,7.07e-09,39;UBERON:0001890,7.07e-09,39;UBERON:0006240,7.07e-09,39;UBERON:0010371,8.57e-09,73;UBERON:0003528,3.53e-08,29;UBERON:0002791,3.53e-08,29;UBERON:0001893,3.53e-08,29;UBERON:0003056,5.79e-07,49;UBERON:0010314,9.43e-07,92|phase1_expression=1.44133962394315,0.348975407639361,0.454999239389536,0.60492842261366,1.00179145989269,0.16787927191189,0.700837921786577,1.93684985162364,2.81577444303333,3.5109678948299,0.34243593645101,0.0797721589953364,2.73921167889929,2.01066925563694,0,0.607425802169478,0.699561878128147,1.41957974411207,0.548457734422955,2.54633791078818,2.46625541438102,1.78723712161594,1.56719873483361,1.91990907352088,0.68822784320151,0.57423196411502,0.86152399231815,0.861884930743556,0.760093677825496,1.51218077855958,0.886922042621219,0,0,0,1.1554064790051,1.49611180822643,0.612508068787107,2.92972141515835,2.3440060335714,3.14114246384279,8.82347232046521,6.14740936462601,6.311634589405,0.503587271902309,0.912392380975631,0.367093504323363,3.9119567217402,0.65407546914134,2.63623419281366,2.52758868796568,0.839918529752175,0,3.6912173332702,1.45072428402269,4.03312558970957,1.28629718017973,1.14613375975503,0,4.45096213891115,2.64495489636016,5.07065122804943,0.677689064138264,1.77858959222228,4.94944844504769,1.97773272513395,2.8419204597844,1.19840044207362,3.84218305321555,1.14058573539325,1.21505344498522,1.05162480675691,3.42781181284564,2.20868540951614,1.22490799214954,1.15014565221884,0.919218786610021,1.10115880999389,3.31987079021488,3.99376986466233,4.08847491963601,3.93396867490361,3.12548022334056,3.35019598801657,2.8138130501584,3.36156145108982,3.53554302568401,2.27794689278565,4.28718725398191,0.075726193333184,0.906858721281426,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,0.649776417447669,0,0.983110940922263,0.681721290312231,1.03914401841148,0.70667914902068,1.26759077799012,1.28326477414318,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,0.68510327831436,2.07150306917737,0.890652834388949,0.346970653532272,0.304465478312141,1.38369298353635,0.904335843315735,0.705532242814229,1.13099932196708,1.73036477414062,1.15679485535929,0.884610551949874,1.29413479957927,2.20841518460394,0.969750506270444,0,2.04946557908083,2.51336048176146,1.53274233125155,0.479260498023681,1.19980546198682,1.39777249780371,3.2953940669061,0,1.38219787324151,2.08589184230732,2.04572365864264,3.53239675751252,2.27137768294861,0.611036183101898,1.36847667671102,1.0108910337347,0.631325567659422,1.04096354370163,0.689706313300419,0.180062129805349,0.90422890701429,1.15662048557257,1.15302348256365,0.562210347358373,1.55222022443409,0.431135985865684,0.567318240503458,0.703804496655795,1.53437012699302,0.278047249225598,1.0447564995665,0.411564272815887,0.995171334092466,0.702213187313235,0.257347907114715,0.284163499395593,0.414251545071004,0.938104239924385,0.720248245844059,0.946978942340841,0.983821158737019,1.23413690309903,1.16266972375204,1.60964040839772,0.934122738937356,1.81015834904829,1.14917224855367,0.972825714550269,1.31579988682799,1.3173006917463,0.805238512562231,2.52347938276953,1.74937841044784,2.31293148088659,0.528901133327089,0.853153002140936,0.696710015581316,0.644337306610467,0.80673409849337,0.889512175379481,1.712030635013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|EntrezGene=19342
|HGNC=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000134462,ENSMUST00000141906_5end
|description=CAGE_peak_2_at_Rab4b_5end
|id=chr7:27963833..27963848,-
|ontology_enrichment_celltype=CL:0000117!5.02e-08!23;CL:0000337!5.02e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.67e-08,23;CL:0000337,1.67e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.59e-13!52;UBERON:0005068!2.59e-13!52;UBERON:0006241!2.59e-13!52;UBERON:0007135!2.59e-13!52;UBERON:0007811!2.91e-13!86;UBERON:0001017!5.13e-13!73;UBERON:0005743!5.13e-13!73;UBERON:0000073!4.29e-12!75;UBERON:0001016!4.29e-12!75;UBERON:0000955!1.11e-11!50;UBERON:0006238!1.11e-11!50;UBERON:0002616!2.51e-11!49;UBERON:0000153!2.78e-11!94;UBERON:0000033!1.85e-09!63;UBERON:0002020!1.86e-09!34;UBERON:0002346!7.81e-09!71;UBERON:0003075!7.81e-09!71;UBERON:0007284!7.81e-09!71;UBERON:0003080!1.14e-08!40;UBERON:0002780!3.22e-08!39;UBERON:0001890!3.22e-08!39;UBERON:0006240!3.22e-08!39;UBERON:0002791!3.24e-07!29;UBERON:0003528!3.24e-07!29;UBERON:0001893!3.24e-07!29;UBERON:0004121!3.74e-07!102;UBERON:0000924!3.74e-07!102;UBERON:0006601!3.74e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.08e-15,54;UBERON:0001049,1.41e-14,52;UBERON:0005068,1.41e-14,52;UBERON:0006241,1.41e-14,52;UBERON:0007135,1.41e-14,52;UBERON:0001017,3.67e-14,73;UBERON:0001016,3.88e-13,75;UBERON:0000955,1.05e-11,47;UBERON:0006238,1.05e-11,47;UBERON:0002616,2.58e-11,46;UBERON:0002346,3.01e-11,64;UBERON:0003075,3.01e-11,64;UBERON:0007284,3.01e-11,64;UBERON:0002020,9.73e-11,34;UBERON:0003080,2.20e-09,40;UBERON:0004121,5.56e-09,95;UBERON:0000924,5.56e-09,95;UBERON:0006601,5.56e-09,95;UBERON:0002780,7.07e-09,39;UBERON:0001890,7.07e-09,39;UBERON:0006240,7.07e-09,39;UBERON:0010371,8.57e-09,73;UBERON:0003528,3.53e-08,29;UBERON:0002791,3.53e-08,29;UBERON:0001893,3.53e-08,29;UBERON:0003056,5.79e-07,49;UBERON:0010314,9.43e-07,92
|phase1_expression=1.44133962394315,0.348975407639361,0.454999239389536,0.60492842261366,1.00179145989269,0.16787927191189,0.700837921786577,1.93684985162364,2.81577444303333,3.5109678948299,0.34243593645101,0.0797721589953364,2.73921167889929,2.01066925563694,0,0.607425802169478,0.699561878128147,1.41957974411207,0.548457734422955,2.54633791078818,2.46625541438102,1.78723712161594,1.56719873483361,1.91990907352088,0.68822784320151,0.57423196411502,0.86152399231815,0.861884930743556,0.760093677825496,1.51218077855958,0.886922042621219,0,0,0,1.1554064790051,1.49611180822643,0.612508068787107,2.92972141515835,2.3440060335714,3.14114246384279,8.82347232046521,6.14740936462601,6.311634589405,0.503587271902309,0.912392380975631,0.367093504323363,3.9119567217402,0.65407546914134,2.63623419281366,2.52758868796568,0.839918529752175,0,3.6912173332702,1.45072428402269,4.03312558970957,1.28629718017973,1.14613375975503,0,4.45096213891115,2.64495489636016,5.07065122804943,0.677689064138264,1.77858959222228,4.94944844504769,1.97773272513395,2.8419204597844,1.19840044207362,3.84218305321555,1.14058573539325,1.21505344498522,1.05162480675691,3.42781181284564,2.20868540951614,1.22490799214954,1.15014565221884,0.919218786610021,1.10115880999389,3.31987079021488,3.99376986466233,4.08847491963601,3.93396867490361,3.12548022334056,3.35019598801657,2.8138130501584,3.36156145108982,3.53554302568401,2.27794689278565,4.28718725398191,0.075726193333184,0.906858721281426,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,0.649776417447669,0,0.983110940922263,0.681721290312231,1.03914401841148,0.70667914902068,1.26759077799012,1.28326477414318,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,0.68510327831436,2.07150306917737,0.890652834388949,0.346970653532272,0.304465478312141,1.38369298353635,0.904335843315735,0.705532242814229,1.13099932196708,1.73036477414062,1.15679485535929,0.884610551949874,1.29413479957927,2.20841518460394,0.969750506270444,0,2.04946557908083,2.51336048176146,1.53274233125155,0.479260498023681,1.19980546198682,1.39777249780371,3.2953940669061,0,1.38219787324151,2.08589184230732,2.04572365864264,3.53239675751252,2.27137768294861,0.611036183101898,1.36847667671102,1.0108910337347,0.631325567659422,1.04096354370163,0.689706313300419,0.180062129805349,0.90422890701429,1.15662048557257,1.15302348256365,0.562210347358373,1.55222022443409,0.431135985865684,0.567318240503458,0.703804496655795,1.53437012699302,0.278047249225598,1.0447564995665,0.411564272815887,0.995171334092466,0.702213187313235,0.257347907114715,0.284163499395593,0.414251545071004,0.938104239924385,0.720248245844059,0.946978942340841,0.983821158737019,1.23413690309903,1.16266972375204,1.60964040839772,0.934122738937356,1.81015834904829,1.14917224855367,0.972825714550269,1.31579988682799,1.3173006917463,0.805238512562231,2.52347938276953,1.74937841044784,2.31293148088659,0.528901133327089,0.853153002140936,0.696710015581316,0.644337306610467,0.80673409849337,0.889512175379481,1.71203063501303,0.474529061544512,1.15289268306808,1.25667604400135,0.994782360205754,1.75467678407208,1.79763881730844,1.72910439899755,1.39398891278057,1.13800740571849,0.342745537829186,2.25415471346161,0.407302655690628,0.775809948670503,0.49095073923223,0.885311519739602,0.147610147979602,1.56998727841375,0.987177311374404,0.592905254174298,0.333690211432188,0.393117990226406,0.449724224769707,0.202860121388503,0,0,0.575392274901621,0.486405680325106,0.823684239564244,0,0.744281895337007,0.312037673114561,0.757736633841335,0.358794827043824,1.4473305640901,2.21703828199926,0.37898282354097,1.46668478797823,0.678980343100753,1.64283173801951,1.67506257441816,1.19021820443007,1.17080188714679,0.788175720530955,0.664394068946325,2.07291199254733,1.47476983244164,1.89953480052485,0.723245292907558,1.50791283939272,0,0.491764273019036,0.551873492609465,3.37156238974363,5.62616095642575,0.983609672260053,2.7771801992481,0.94652465824877,1.17131623288992,1.50796378412959,0.955875191810208,0.891194696329576,0,0.404810701674894,1.46127928955656,0.395287777946524,2.24924921495265,1.27746076687442,0.890328018336276,0.977321756121456,2.14461159864296,0,1.45668381692989,0,0.565815239267694,0.295301892880773,0.307435147943927,1.55056975900933,0.727067458955011,1.06949213515416,0.948110273807448,1.05418608574999,0,1.02131881726136,0.720244376125241,0.905510786479282,1.92903331528433,1.06404140185364,2.31879462882692,1.31639216481697,3.65357938937519,1.17335854031855,0.63549621259146,1.10264199027481,0.8244312647074,1.13025098687134,0.542816324353403,0.596861720015682,0,0.582961673259701,3.8939313422207,1.36696704638282,0.412773735926445,1.29636169158798,0.565105371014073,0.820165366326151,1.60144721244566,0.509935289981566,1.39951452323658,0.829199842826543,0.954670618015114,1.42351197111511,0.406638934253697,0.540026704109006,0.836353184057875,0.218362563746178,0.809186078308924,0.661227645802687,1.30877970992015,0.90730481304255,1.86401793926078,3.38215763210514,0.897099276263873,1.15820943319968,0.583353565032143,0.904118764344118,0.506868376472335,0.469428954583016,1.3020438484395,1.04859344425711,1.44950472495604,1.72818003754719,3.47612232690996,1.01362607645082,0.718976700153791,1.81889152168913,2.14832034800978,2.98022032171897,1.44234539423963,3.39685912501528,2.42319479875554,1.752756553065,2.92395936896837,2.0466154955348,2.88635524920988,2.33753804363138,0.906921534460845,0,0.0897138566094757,0.335769232728157,1.54551675225752,0.750729901804728,0.915758121336325,1.2862102744744,0.501572104035363,4.51801474093653,3.22227665555024,6.87474616127276,2.40594455281163,2.74033007908257,3.0215755895588,2.02506750069542,3.15224842256954,0.453142408984205,2.07104124700728,0.518936737920883,1.59609949360412,2.04880326904961,1.45864030240976,1.46729213839588,1.47074806760011,1.11123363900808,1.23621034343337,0.64183841918363,0.505394423527595,0.760437899670719,0.754505365544305,0.561849044819294,0.576226371643824,0.746661096422973,0.952587382566147,0.579421629724277,0.77163688185482,0.824171801606613,0.588795680537589,0.685738504770831,0.887379030796687,0.715308569841963,1.30811774969096,0.752875043322645,0.846146078916765,0.365855945745545,1.31534855718921,1.08643291076689,0,0.711810108745045,0.689531376628944,1.63692417267876,0.619747364743864,1.35034627686799,1.99848462350357,1.16965804222704,0.214871054048298,1.53030665655075,1.32354851471709,2.08681052058379
|short_description=p2@Rab4b
}}

Revision as of 12:57, 14 September 2013

Short description:p2@Rab4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab4b_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000134462, ENSMUST00000141906_5end
EntrezGene:Rab4b
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Rab4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.69
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A22.05
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G22.34
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.67e-0823
neuroblast (sensu Vertebrata)1.67e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.08e-1554
neural tube1.41e-1452
neural rod1.41e-1452
future spinal cord1.41e-1452
neural keel1.41e-1452
central nervous system3.67e-1473
nervous system3.88e-1375
brain1.05e-1147
future brain1.05e-1147
regional part of brain2.58e-1146
neurectoderm3.01e-1164
neural plate3.01e-1164
presumptive neural plate3.01e-1164
gray matter9.73e-1134
anterior neural tube2.20e-0940
ectoderm-derived structure5.56e-0995
ectoderm5.56e-0995
presumptive ectoderm5.56e-0995
regional part of forebrain7.07e-0939
forebrain7.07e-0939
future forebrain7.07e-0939
ecto-epithelium8.57e-0973
brain grey matter3.53e-0829
regional part of telencephalon3.53e-0829
telencephalon3.53e-0829
pre-chordal neural plate5.79e-0749
structure with developmental contribution from neural crest9.43e-0792







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