FFCP PHASE1:Mm9::chr9:7184440..7184518,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=110350|HGNC=|UniProt=Q45VK7,E9Q846|association_with_transcript=0bp_to_ENSMUST00000140466,ENSMUST00000168583_5end|description=CAGE_peak_1_at_Dync2h1_5end|id=chr9:7184440..7184518,-|ontology_enrichment_celltype=CL:0000117!1.62e-07!23;CL:0000337!1.62e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-07,23;CL:0000337,1.62e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!1.41e-19!86;UBERON:0000153!3.84e-19!94;UBERON:0000033!7.26e-13!63;UBERON:0003056!4.37e-11!49;UBERON:0002346!2.07e-09!71;UBERON:0003075!2.07e-09!71;UBERON:0007284!2.07e-09!71;UBERON:0000475!4.31e-09!200;UBERON:0004121!6.41e-09!102;UBERON:0000924!6.41e-09!102;UBERON:0006601!6.41e-09!102;UBERON:0000955!1.07e-08!50;UBERON:0006238!1.07e-08!50;UBERON:0001049!2.55e-08!52;UBERON:0005068!2.55e-08!52;UBERON:0006241!2.55e-08!52;UBERON:0007135!2.55e-08!52;UBERON:0002616!3.21e-08!49;UBERON:0001017!3.82e-08!73;UBERON:0005743!3.82e-08!73;UBERON:0000073!7.12e-08!75;UBERON:0001016!7.12e-08!75;UBERON:0003080!1.66e-07!40;UBERON:0002020!1.67e-07!34;UBERON:0002780!3.84e-07!39;UBERON:0001890!3.84e-07!39;UBERON:0006240!3.84e-07!39;UBERON:0002791!7.63e-07!29;UBERON:0003528!7.63e-07!29;UBERON:0001893!7.63e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.85e-11,64;UBERON:0003075,3.85e-11,64;UBERON:0007284,3.85e-11,64;UBERON:0003056,4.37e-11,49;UBERON:0010371,5.39e-11,73;UBERON:0007811,8.65e-11,36;UBERON:0004121,3.87e-10,95;UBERON:0000924,3.87e-10,95;UBERON:0006601,3.87e-10,95;UBERON:0000153,1.34e-09,43;UBERON:0010314,3.79e-09,92;UBERON:0000073,5.86e-09,54;UBERON:0001049,2.56e-08,52;UBERON:0005068,2.56e-08,52;UBERON:0006241,2.56e-08,52;UBERON:0007135,2.56e-08,52;UBERON:0001017,3.84e-08,73;UBERON:0001016,7.17e-08,75;UBERON:0000955,8.84e-08,47;UBERON:0006238,8.84e-08,47;UBERON:0003080,1.65e-07,40;UBERON:0002020,1.67e-07,34;UBERON:0002616,2.55e-07,46;UBERON:0002780,3.84e-07,39;UBERON:0001890,3.84e-07,39;UBERON:0006240,3.84e-07,39;UBERON:0003528,7.63e-07,29;UBERON:0002791,7.63e-07,29;UBERON:0001893,7.63e-07,29|phase1_expression=18.2569685699465,1.74487703819681,3.18499467572675,2.72217790176147,4.50806156951712,1.84667199103079,2.10251376535973,14.7200588723397,9.57363310631334,4.44722600011788,13.0125655851384,17.2307863429927,15.0656642339461,14.9488888136486,1.99865857089398,7.89653542820321,6.29605690315332,18.2968055907778,18.6475629703805,16.1268067683251,10.8855411393369,31.2766496282789,27.6871776487272,3.35984087866154,2.98232065387321,4.01962374880514,1.29228598847722,1.29282739611533,5.13063232532209,4.28451220591882,3.54768817048488,7.62036808151557,3.69038872550742,31.6963362030877,2.02196133825892,3.82339684324532,3.06254034393554,9.62622750694888,8.5946887897618,16.7527598071615,8.2352408324342,9.56263678941824,6.311634589405,9.69405498411945,9.0225468785368,5.32285581268876,1.56478268869608,0.872100625521786,3.95435128922049,2.13872888981712,2.37976916763116,1.43752564364972,12.9192606664457,8.70434570413613,7.39406358113421,3.08711323243136,6.01720223871389,4.64104883049698,16.3876333296274,18.5146842745212,12.6766280701236,0.677689064138264,0.889294796111139,4.49949858640699,3.9554654502679,4.2628806896766,2.99600110518405,4.61061966385865,23.1227835447905,16.4707244764663,17.6672967535161,9.99778445413313,10.1599528837742,15.8013130987291,13.1308295294984,14.7075005857603,23.1243350098716,12.257984456178,14.1318010595744,12.924856197559,16.5592634920361,15.6274011167028,10.0505879640497,21.3849791812038,12.835052813252,12.6690291753677,15.3761415263031,17.5215479075783,9.84440513331393,8.01058537131927,6.08715426273523,6.0229671388697,0,0,1.94932925234301,0,7.02222100658759,6.98764322570037,4.67614808285164,6.00677276667578,21.4081998060554,19.2489716121477,17.8363667794652,7.11066703153331,3.24736561516821,1.77351905832569,4.54972000513305,5.82337786567206,13.9826457169473,6.82833839698194,7.28638372417771,7.00270600117925,8.99400439298628,9.64624899536784,11.5236932992991,6.40899615781345,5.6854842578906,5.35017620603673,6.19227386364912,10.0295446967394,12.1462835153216,12.6067565815158,5.59175283654366,23.4224637609238,26.8091784721222,3.57639877292028,7.42853771936706,3.59941638596045,9.65733725755292,16.4769703345305,12.8100168789215,23.3717094929928,17.2086076990354,17.6443665557928,10.5971902725376,16.061885043708,10.9986512958342,12.1918831197891,7.83440551144392,10.9429765060966,13.7927669540466,17.7024620413774,13.6847218652065,21.8521985861787,27.0104901630772,28.4412459032367,24.0813432118503,20.6962696591213,7.11374376678379,10.4008344092301,11.2608719464927,6.35667624039967,10.8438427197983,10.7958171621872,12.9642745937004,11.5439874754726,2.80885274925294,3.60287069960601,3.12579849335152,7.45652781127807,11.0227248191115,10.0834754418168,10.8902578369197,9.44468312387538,13.4212388212019,13.2544348507732,7.24338183778972,15.7633212195679,12.671108443338,10.342550236983,10.5389452409612,12.5731989185786,8.56245449635098,11.8101648509127,17.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| ||
|EntrezGene=110350 | |||
|HGNC= | |||
|UniProt=Q45VK7,E9Q846 | |||
|association_with_transcript=0bp_to_ENSMUST00000140466,ENSMUST00000168583_5end | |||
|description=CAGE_peak_1_at_Dync2h1_5end | |||
|id=chr9:7184440..7184518,- | |||
|ontology_enrichment_celltype=CL:0000117!1.62e-07!23;CL:0000337!1.62e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-07,23;CL:0000337,1.62e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.41e-19!86;UBERON:0000153!3.84e-19!94;UBERON:0000033!7.26e-13!63;UBERON:0003056!4.37e-11!49;UBERON:0002346!2.07e-09!71;UBERON:0003075!2.07e-09!71;UBERON:0007284!2.07e-09!71;UBERON:0000475!4.31e-09!200;UBERON:0004121!6.41e-09!102;UBERON:0000924!6.41e-09!102;UBERON:0006601!6.41e-09!102;UBERON:0000955!1.07e-08!50;UBERON:0006238!1.07e-08!50;UBERON:0001049!2.55e-08!52;UBERON:0005068!2.55e-08!52;UBERON:0006241!2.55e-08!52;UBERON:0007135!2.55e-08!52;UBERON:0002616!3.21e-08!49;UBERON:0001017!3.82e-08!73;UBERON:0005743!3.82e-08!73;UBERON:0000073!7.12e-08!75;UBERON:0001016!7.12e-08!75;UBERON:0003080!1.66e-07!40;UBERON:0002020!1.67e-07!34;UBERON:0002780!3.84e-07!39;UBERON:0001890!3.84e-07!39;UBERON:0006240!3.84e-07!39;UBERON:0002791!7.63e-07!29;UBERON:0003528!7.63e-07!29;UBERON:0001893!7.63e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.85e-11,64;UBERON:0003075,3.85e-11,64;UBERON:0007284,3.85e-11,64;UBERON:0003056,4.37e-11,49;UBERON:0010371,5.39e-11,73;UBERON:0007811,8.65e-11,36;UBERON:0004121,3.87e-10,95;UBERON:0000924,3.87e-10,95;UBERON:0006601,3.87e-10,95;UBERON:0000153,1.34e-09,43;UBERON:0010314,3.79e-09,92;UBERON:0000073,5.86e-09,54;UBERON:0001049,2.56e-08,52;UBERON:0005068,2.56e-08,52;UBERON:0006241,2.56e-08,52;UBERON:0007135,2.56e-08,52;UBERON:0001017,3.84e-08,73;UBERON:0001016,7.17e-08,75;UBERON:0000955,8.84e-08,47;UBERON:0006238,8.84e-08,47;UBERON:0003080,1.65e-07,40;UBERON:0002020,1.67e-07,34;UBERON:0002616,2.55e-07,46;UBERON:0002780,3.84e-07,39;UBERON:0001890,3.84e-07,39;UBERON:0006240,3.84e-07,39;UBERON:0003528,7.63e-07,29;UBERON:0002791,7.63e-07,29;UBERON:0001893,7.63e-07,29 | |||
|phase1_expression=18.2569685699465,1.74487703819681,3.18499467572675,2.72217790176147,4.50806156951712,1.84667199103079,2.10251376535973,14.7200588723397,9.57363310631334,4.44722600011788,13.0125655851384,17.2307863429927,15.0656642339461,14.9488888136486,1.99865857089398,7.89653542820321,6.29605690315332,18.2968055907778,18.6475629703805,16.1268067683251,10.8855411393369,31.2766496282789,27.6871776487272,3.35984087866154,2.98232065387321,4.01962374880514,1.29228598847722,1.29282739611533,5.13063232532209,4.28451220591882,3.54768817048488,7.62036808151557,3.69038872550742,31.6963362030877,2.02196133825892,3.82339684324532,3.06254034393554,9.62622750694888,8.5946887897618,16.7527598071615,8.2352408324342,9.56263678941824,6.311634589405,9.69405498411945,9.0225468785368,5.32285581268876,1.56478268869608,0.872100625521786,3.95435128922049,2.13872888981712,2.37976916763116,1.43752564364972,12.9192606664457,8.70434570413613,7.39406358113421,3.08711323243136,6.01720223871389,4.64104883049698,16.3876333296274,18.5146842745212,12.6766280701236,0.677689064138264,0.889294796111139,4.49949858640699,3.9554654502679,4.2628806896766,2.99600110518405,4.61061966385865,23.1227835447905,16.4707244764663,17.6672967535161,9.99778445413313,10.1599528837742,15.8013130987291,13.1308295294984,14.7075005857603,23.1243350098716,12.257984456178,14.1318010595744,12.924856197559,16.5592634920361,15.6274011167028,10.0505879640497,21.3849791812038,12.835052813252,12.6690291753677,15.3761415263031,17.5215479075783,9.84440513331393,8.01058537131927,6.08715426273523,6.0229671388697,0,0,1.94932925234301,0,7.02222100658759,6.98764322570037,4.67614808285164,6.00677276667578,21.4081998060554,19.2489716121477,17.8363667794652,7.11066703153331,3.24736561516821,1.77351905832569,4.54972000513305,5.82337786567206,13.9826457169473,6.82833839698194,7.28638372417771,7.00270600117925,8.99400439298628,9.64624899536784,11.5236932992991,6.40899615781345,5.6854842578906,5.35017620603673,6.19227386364912,10.0295446967394,12.1462835153216,12.6067565815158,5.59175283654366,23.4224637609238,26.8091784721222,3.57639877292028,7.42853771936706,3.59941638596045,9.65733725755292,16.4769703345305,12.8100168789215,23.3717094929928,17.2086076990354,17.6443665557928,10.5971902725376,16.061885043708,10.9986512958342,12.1918831197891,7.83440551144392,10.9429765060966,13.7927669540466,17.7024620413774,13.6847218652065,21.8521985861787,27.0104901630772,28.4412459032367,24.0813432118503,20.6962696591213,7.11374376678379,10.4008344092301,11.2608719464927,6.35667624039967,10.8438427197983,10.7958171621872,12.9642745937004,11.5439874754726,2.80885274925294,3.60287069960601,3.12579849335152,7.45652781127807,11.0227248191115,10.0834754418168,10.8902578369197,9.44468312387538,13.4212388212019,13.2544348507732,7.24338183778972,15.7633212195679,12.671108443338,10.342550236983,10.5389452409612,12.5731989185786,8.56245449635098,11.8101648509127,17.0334858336943,21.0954455377533,5.61711931072457,2.90895623329899,11.7308537794379,12.3085436086032,10.4382643670896,11.4959609035305,6.0042071838115,7.79925067061493,3.32170343081158,5.92916237006439,11.5614196048124,12.9321706826748,11.1129529657898,7.19055526923377,5.83572734661674,7.56736838366595,4.93136542478012,14.8523066392647,12.3978509240388,15.6811522440892,13.3827216145662,14.6583863570766,13.9120381673366,10.775540802511,8.63493003127561,11.105744752962,3.26097889795864,8.67594549723689,6.4864468387357,8.31989815823959,6.6943840058206,7.95884627182976,7.38414970166117,4.89083433666378,8.2688965655268,5.49122826376163,7.18841032636773,7.81495990103857,8.42501717409313,3.03094653536534,3.94674309748207,4.3419916922703,12.1937105509959,8.52711352967181,9.12603868075345,12.9006265189143,11.4998221661366,13.4005005953453,9.52174563544055,14.6350235893349,14.029527825451,17.2742457926044,13.5536553358864,14.5838350097007,16.9231282228578,16.7792907954553,9.04747703635634,8.15858525728064,0.983528546038072,7.72622889653251,11.2385412991454,13.7137673312878,4.09837363441689,12.3710754330143,7.57219726599016,8.58965237452605,9.90947629570875,13.6212214832955,10.9171350300373,8.49229592366497,7.69140333182299,11.6902343164525,12.2539211163422,22.8138134659483,8.37446502728785,5.87616492101942,12.5422958702254,8.57844639457184,6.63725691699814,7.76898035695941,4.53485335447127,8.48722858901541,3.2483208216885,6.14870295887855,9.8202751403924,11.9966130727577,11.7644134866958,8.21695570633122,6.32511651449993,11.3449097573006,20.0859367394735,13.5045820523483,5.6917820864412,11.1455258216428,13.1231772895282,11.0588666913284,12.176627524557,7.00269382963578,4.92810586933792,4.87213762986786,3.96951116498931,5.11147384118588,16.1464426695906,12.0625849856312,11.4597450243011,10.5050175836839,6.99554007911642,13.9068976507882,5.46786818553129,7.84270098260245,10.1856990053341,13.3741604473331,8.33834789098253,10.7525741407066,6.96911562974807,7.69732987780119,8.43019840206985,3.81868247206045,8.85740782027179,13.2157653632452,12.6366248761507,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| |||
|short_description=p1@Dync2h1 | |||
}} |
Revision as of 18:40, 14 September 2013
Short description: | p1@Dync2h1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dync2h1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000140466, ENSMUST00000168583_5end |
EntrezGene: | Dync2h1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.62e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.62e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.85e-11 | 64 |
neural plate | 3.85e-11 | 64 |
presumptive neural plate | 3.85e-11 | 64 |
pre-chordal neural plate | 4.37e-11 | 49 |
ecto-epithelium | 5.39e-11 | 73 |
craniocervical region | 8.65e-11 | 36 |
ectoderm-derived structure | 3.87e-10 | 95 |
ectoderm | 3.87e-10 | 95 |
presumptive ectoderm | 3.87e-10 | 95 |
anterior region of body | 1.34e-09 | 43 |
structure with developmental contribution from neural crest | 3.79e-09 | 92 |
regional part of nervous system | 5.86e-09 | 54 |
neural tube | 2.56e-08 | 52 |
neural rod | 2.56e-08 | 52 |
future spinal cord | 2.56e-08 | 52 |
neural keel | 2.56e-08 | 52 |
central nervous system | 3.84e-08 | 73 |
nervous system | 7.17e-08 | 75 |
brain | 8.84e-08 | 47 |
future brain | 8.84e-08 | 47 |
anterior neural tube | 1.65e-07 | 40 |
gray matter | 1.67e-07 | 34 |
regional part of brain | 2.55e-07 | 46 |
regional part of forebrain | 3.84e-07 | 39 |
forebrain | 3.84e-07 | 39 |
future forebrain | 3.84e-07 | 39 |
brain grey matter | 7.63e-07 | 29 |
regional part of telencephalon | 7.63e-07 | 29 |
telencephalon | 7.63e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.