FFCP PHASE1:Mm9::chrX:131343523..131343541,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67416|HGNC=|MCL_coexpression_id=1164|UniProt=Q6A058|association_with_transcript=0bp_to_ENSMUST00000035559_5end|description=CAGE_peak_1_at_Armcx2_5end|id=chrX:131343523..131343541,-|ontology_enrichment_celltype=CL:0000393!1.47e-07!39;CL:0000211!1.47e-07!39|ontology_enrichment_celltype_v019_2=CL:0000393,1.47e-07,39;CL:0000211,1.47e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.33e-10!71;UBERON:0003075!7.33e-10!71;UBERON:0007284!7.33e-10!71;UBERON:0001017!2.00e-09!73;UBERON:0005743!2.00e-09!73;UBERON:0000073!6.71e-09!75;UBERON:0001016!6.71e-09!75;UBERON:0003056!2.69e-08!49;UBERON:0004121!3.70e-08!102;UBERON:0000924!3.70e-08!102;UBERON:0006601!3.70e-08!102;UBERON:0001049!4.17e-08!52;UBERON:0005068!4.17e-08!52;UBERON:0006241!4.17e-08!52;UBERON:0007135!4.17e-08!52;UBERON:0000033!1.20e-07!63;UBERON:0003080!5.01e-07!40;UBERON:0002780!5.02e-07!39;UBERON:0001890!5.02e-07!39;UBERON:0006240!5.02e-07!39;UBERON:0002616!6.99e-07!49;UBERON:0000955!8.95e-07!50;UBERON:0006238!8.95e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.42e-11,92;UBERON:0001017,1.99e-09,73;UBERON:0002346,2.38e-09,64;UBERON:0003075,2.38e-09,64;UBERON:0007284,2.38e-09,64;UBERON:0001016,6.67e-09,75;UBERON:0003056,2.68e-08,49;UBERON:0001049,4.15e-08,52;UBERON:0005068,4.15e-08,52;UBERON:0006241,4.15e-08,52;UBERON:0007135,4.15e-08,52;UBERON:0000073,5.26e-08,54;UBERON:0010371,8.11e-08,73;UBERON:0004121,1.49e-07,95;UBERON:0000924,1.49e-07,95;UBERON:0006601,1.49e-07,95;UBERON:0003080,4.99e-07,40;UBERON:0002780,5.00e-07,39;UBERON:0001890,5.00e-07,39;UBERON:0006240,5.00e-07,39;UBERON:0002616,8.51e-07,46|phase1_expression=92.5660336265709,0.697950815278722,0,0,0,0,0,10.7172358456508,16.04991432529,17.5548394741495,2.39705155515707,1.83475965689274,11.1280474455284,7.95525662012876,3.33109761815663,4.45445588257617,1.39912375625629,9.30613387806801,9.04955261797876,7.21462408056651,20.3253463461057,0.496454756004426,1.04479915655574,1.75991665072747,1.83527424853736,0,0.86152399231815,0.646413698057667,0.190023419456374,0,0,7.62036808151557,6.76571266343027,0,0,0.166234645358492,0,0,0.7813353445238,1.0470474879476,0,0,0,115.321485265629,99.0452618014657,107.191303262422,40.684349906098,45.7852828398938,42.3994332677531,48.8019046676451,48.0153426174993,41.6882436658418,14.4293041209653,15.9579671242496,19.8295341494054,57.3688542360162,58.1662883075676,45.3791441204149,100.955913968939,149.175456154713,101.413024560989,67.7689064138264,54.2469825627795,5.84934816232909,8.89979726310277,4.2628806896766,33.8548124885797,25.3584081512226,55.577632197344,67.232957289182,56.3670896421704,68.8418872413167,56.9840835655163,72.5145531352528,91.5324248224157,68.9414089957516,45.1475112097494,56.8208654479085,56.6808107715538,121.862929862699,149.490809646337,104.703587481909,45.2276458382237,41.6444331423443,52.1042024918922,74.5410321248379,65.2062298059891,87.7941389837166,11.8132861599767,24.2584707942782,22.6094301187309,16.3480536626463,0,1.07940638327563,0.649776417447669,0.896053774194671,8.98844288843212,105.32593935324,80.5336614268893,74.2013106471715,71.5484572465537,37.2146784501522,10.1922095882658,7.11066703153331,4.32982082022428,4.81383744402687,5.05524445014783,5.59501010623394,10.616453229534,32.211944177067,84.6608394618743,83.7280065358388,56.7314123249904,53.8079826772863,54.7963375252384,28.1493164578473,13.3485282576562,10.9895511259133,7.96149496754887,51.6036251332235,12.5879665522424,14.5462575940567,5.59175283654366,31.034764483224,21.154117388159,3.32094171771169,10.543730956521,11.3981518888747,14.7401463404755,52.4267237916879,49.8675657072303,67.3507327324953,46.5849178115301,41.9373350021742,59.6351687885937,46.4010012373787,88.8039252774758,32.3458123586242,73.5423227041993,10.9429765060966,108.910810759783,100.237317532994,111.458458349511,85.9017461663576,59.2597907608066,59.5728799324552,50.9737381604925,36.7358786449402,122.658187978787,107.790465695657,118.06320431401,108.50188755165,85.6385527614841,103.082641290561,69.5543621058849,103.895887279253,11.2354109970118,13.1247432628505,8.24074148247219,96.9348615466149,85.1329597731379,91.8316513451176,100.8532573593,76.1477576862453,73.7396799601668,61.8540293036085,65.1904365401075,38.5325629811659,39.6589238291488,23.9684497555479,12.6467342891535,12.5731989185786,15.3685080703735,10.7365135008297,58.6708956493915,65.2415242484663,0.660837565967596,2.11560453330835,102.165072006377,86.6242786039436,57.7326226722978,43.9670083678887,36.2476211467139,26.4413620296457,5.69434873853414,22.2343588877415,16.0854533632172,20.8904295643208,16.182019230887,12.5834717211591,5.18731319699266,4.97853183135918,115.507751680427,68.4348590532276,92.420343251926,76.9802019255288,62.0647958936402,41.6606770148492,31.6182685621286,12.6944727262458,13.6588893221996,10.488758933353,1.77871576252289,35.3711624118119,32.4322341936785,22.7110733508702,21.3003127457928,24.3588931349941,21.1339456978578,22.440298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| ||
|EntrezGene=67416 | |||
|HGNC= | |||
|MCL_coexpression_id=1164 | |||
|UniProt=Q6A058 | |||
|association_with_transcript=0bp_to_ENSMUST00000035559_5end | |||
|description=CAGE_peak_1_at_Armcx2_5end | |||
|id=chrX:131343523..131343541,- | |||
|ontology_enrichment_celltype=CL:0000393!1.47e-07!39;CL:0000211!1.47e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.47e-07,39;CL:0000211,1.47e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.33e-10!71;UBERON:0003075!7.33e-10!71;UBERON:0007284!7.33e-10!71;UBERON:0001017!2.00e-09!73;UBERON:0005743!2.00e-09!73;UBERON:0000073!6.71e-09!75;UBERON:0001016!6.71e-09!75;UBERON:0003056!2.69e-08!49;UBERON:0004121!3.70e-08!102;UBERON:0000924!3.70e-08!102;UBERON:0006601!3.70e-08!102;UBERON:0001049!4.17e-08!52;UBERON:0005068!4.17e-08!52;UBERON:0006241!4.17e-08!52;UBERON:0007135!4.17e-08!52;UBERON:0000033!1.20e-07!63;UBERON:0003080!5.01e-07!40;UBERON:0002780!5.02e-07!39;UBERON:0001890!5.02e-07!39;UBERON:0006240!5.02e-07!39;UBERON:0002616!6.99e-07!49;UBERON:0000955!8.95e-07!50;UBERON:0006238!8.95e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.42e-11,92;UBERON:0001017,1.99e-09,73;UBERON:0002346,2.38e-09,64;UBERON:0003075,2.38e-09,64;UBERON:0007284,2.38e-09,64;UBERON:0001016,6.67e-09,75;UBERON:0003056,2.68e-08,49;UBERON:0001049,4.15e-08,52;UBERON:0005068,4.15e-08,52;UBERON:0006241,4.15e-08,52;UBERON:0007135,4.15e-08,52;UBERON:0000073,5.26e-08,54;UBERON:0010371,8.11e-08,73;UBERON:0004121,1.49e-07,95;UBERON:0000924,1.49e-07,95;UBERON:0006601,1.49e-07,95;UBERON:0003080,4.99e-07,40;UBERON:0002780,5.00e-07,39;UBERON:0001890,5.00e-07,39;UBERON:0006240,5.00e-07,39;UBERON:0002616,8.51e-07,46 | |||
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| |||
|short_description=p1@Armcx2 | |||
}} | |||
Revision as of 19:18, 14 September 2013
| Short description: | p1@Armcx2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Armcx2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1164 |
| Association with transcript: | 0bp_to_ENSMUST00000035559_5end |
| EntrezGene: | Armcx2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| electrically responsive cell | 1.47e-07 | 39 |
| electrically active cell | 1.47e-07 | 39 |
| Ontology term | p-value | n |
|---|---|---|
| structure with developmental contribution from neural crest | 5.42e-11 | 92 |
| central nervous system | 1.99e-09 | 73 |
| neurectoderm | 2.38e-09 | 64 |
| neural plate | 2.38e-09 | 64 |
| presumptive neural plate | 2.38e-09 | 64 |
| nervous system | 6.67e-09 | 75 |
| pre-chordal neural plate | 2.68e-08 | 49 |
| neural tube | 4.15e-08 | 52 |
| neural rod | 4.15e-08 | 52 |
| future spinal cord | 4.15e-08 | 52 |
| neural keel | 4.15e-08 | 52 |
| regional part of nervous system | 5.26e-08 | 54 |
| ecto-epithelium | 8.11e-08 | 73 |
| ectoderm-derived structure | 1.49e-07 | 95 |
| ectoderm | 1.49e-07 | 95 |
| presumptive ectoderm | 1.49e-07 | 95 |
| anterior neural tube | 4.99e-07 | 40 |
| regional part of forebrain | 5.00e-07 | 39 |
| forebrain | 5.00e-07 | 39 |
| future forebrain | 5.00e-07 | 39 |
| regional part of brain | 8.51e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
