FFCP PHASE1:Mm9::chrX:48371101..48371116,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72065|HGNC=|UniProt=Q8BU31,A2AD86,Q80ZJ1|association_with_transcript=78bp_to_ENSMUST00000053593,NM_172413,uc009tds.1_5end|description=CAGE_peak_6_at_Rap2c_5end|id=chrX:48371101..48371116,-|ontology_enrichment_celltype=CL:0000542!4.16e-07!13;CL:0000051!4.16e-07!13;CL:0000791!5.34e-07!9;CL:0000789!5.34e-07!9;CL:0002420!5.34e-07!9;CL:0002419!5.34e-07!9;CL:0000790!5.34e-07!9;CL:0000838!9.33e-07!12|ontology_enrichment_celltype_v019_2=CL:0000791,5.59e-17,9;CL:0000789,5.59e-17,9;CL:0002420,5.59e-17,9;CL:0002419,5.59e-17,9;CL:0000790,5.59e-17,9;CL:0000838,9.17e-16,12;CL:0000624,1.67e-14,8;CL:0000893,1.81e-14,6;CL:0002489,1.81e-14,6;CL:0000898,1.81e-14,6;CL:0000809,1.81e-14,6;CL:0000810,1.81e-14,6;CL:0000895,1.81e-14,6;CL:0000808,1.81e-14,6;CL:0000894,1.81e-14,6;CL:0000806,1.81e-14,6;CL:0000807,1.81e-14,6;CL:0000805,1.81e-14,6;CL:0002425,1.81e-14,6;CL:0002436,1.81e-14,6;CL:0002427,1.81e-14,6;CL:0002428,1.81e-14,6;CL:0002429,1.81e-14,6;CL:0002433,1.81e-14,6;CL:0002431,1.81e-14,6;CL:0002432,1.81e-14,6;CL:0000542,2.03e-14,13;CL:0000051,2.03e-14,13;CL:0000084,1.22e-13,11;CL:0000827,1.22e-13,11;CL:0000738,5.56e-13,17;CL:0002087,5.56e-13,17;CL:0000988,2.44e-10,32;CL:0002032,2.44e-10,32;CL:0000037,2.44e-10,32;CL:0000837,2.44e-10,32;CL:0002031,6.79e-10,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!4.62e-08!70;UBERON:0002193!2.15e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.55e-10,23;UBERON:0000974,1.55e-10,23;UBERON:0004807,1.55e-10,23;UBERON:0005058,1.55e-10,23;UBERON:0003351,1.55e-10,23;UBERON:0009113,1.55e-10,23;UBERON:0003295,1.55e-10,23;UBERON:0009722,1.55e-10,23;UBERON:0005562,1.55e-10,23;UBERON:0007690,1.55e-10,23;UBERON:0000072,2.86e-10,27;UBERON:0006562,5.26e-10,24;UBERON:0003408,5.26e-10,24;UBERON:0001557,5.26e-10,24;UBERON:0001042,5.26e-10,24;UBERON:0008814,5.26e-10,24;UBERON:0009145,5.26e-10,24;UBERON:0004177,6.57e-08,29;UBERON:0005057,6.57e-08,29;UBERON:0002193,9.50e-07,48;UBERON:0002405,9.50e-07,48|phase1_expression=0,1.74487703819681,0,0,0.500895729946347,0.503637815735669,0.467225281191051,1.93684985162364,3.94208422024667,2.57470978954193,2.39705155515707,1.19658238493005,1.02720437958723,1.04904482902797,0.333109761815663,0.404950534779652,0,0.630924330716475,1.09691546884591,0.84877930359606,0.510259740906419,0.595745707205312,0,0.639969691173627,0.91763712426868,1.72269589234506,0,1.29282739611533,0.380046838912748,0.504060259519861,2.43903561720835,0,0,0,0,0,0,2.92972141515835,0.7813353445238,3.14114246384279,2.35292595212406,3.41522742479223,0,0,0.506884656097573,0.183546752161682,0,0.218025156380447,0,0,0,0,2.18117387875057,0.725362142011344,3.36093799142464,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0.448026887097336,0,0.511290967734173,0.519572009205738,0,0.14084341977668,0,0,0,0.432982082022428,1.01343946190039,0,0.45673551887624,1.29468941823586,0.29688427812965,0,0,0,0,0.352766121407114,0.125666591329675,0.494389935468748,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,0,2.09446706813455,0.510914110417183,1.91704199209472,0.599902730993408,1.14363204365758,0,0,0,0,0,0,0,0.611036183101898,0.248813941220186,0.505445516867349,0,0,0.229902104433473,0.180062129805349,0,0,0.2562274405697,0.0937017245597288,0,0.862271971731369,0.756424320671277,0.175951124163949,0,0.278047249225598,0,1.02891068203972,0.199034266818493,0.702213187313235,0.51469581422943,0.568326998791185,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0,0.660837565967596,0,0.639864751605702,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.658795818896044,0.251335208800269,0,0.58489226135736,1.79763881730844,1.08069024937347,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0.296452627087149,0.500535317148282,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0,1.29708181420028,0.823684239564244,1.43768206527355,0.744281895337007,0,0,0.538192240565737,0.482443521363367,0.369506380333209,0,0.325929952884052,0,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,1.08781136763742,0,0,0,0.117211686592203,0.327869890753351,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0.141940085208269,0.534196811001766,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0.590603785761546,0,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0.388076051348264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| ||
|EntrezGene=72065 | |||
|HGNC= | |||
|UniProt=Q8BU31,A2AD86,Q80ZJ1 | |||
|association_with_transcript=78bp_to_ENSMUST00000053593,NM_172413,uc009tds.1_5end | |||
|description=CAGE_peak_6_at_Rap2c_5end | |||
|id=chrX:48371101..48371116,- | |||
|ontology_enrichment_celltype=CL:0000542!4.16e-07!13;CL:0000051!4.16e-07!13;CL:0000791!5.34e-07!9;CL:0000789!5.34e-07!9;CL:0002420!5.34e-07!9;CL:0002419!5.34e-07!9;CL:0000790!5.34e-07!9;CL:0000838!9.33e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.59e-17,9;CL:0000789,5.59e-17,9;CL:0002420,5.59e-17,9;CL:0002419,5.59e-17,9;CL:0000790,5.59e-17,9;CL:0000838,9.17e-16,12;CL:0000624,1.67e-14,8;CL:0000893,1.81e-14,6;CL:0002489,1.81e-14,6;CL:0000898,1.81e-14,6;CL:0000809,1.81e-14,6;CL:0000810,1.81e-14,6;CL:0000895,1.81e-14,6;CL:0000808,1.81e-14,6;CL:0000894,1.81e-14,6;CL:0000806,1.81e-14,6;CL:0000807,1.81e-14,6;CL:0000805,1.81e-14,6;CL:0002425,1.81e-14,6;CL:0002436,1.81e-14,6;CL:0002427,1.81e-14,6;CL:0002428,1.81e-14,6;CL:0002429,1.81e-14,6;CL:0002433,1.81e-14,6;CL:0002431,1.81e-14,6;CL:0002432,1.81e-14,6;CL:0000542,2.03e-14,13;CL:0000051,2.03e-14,13;CL:0000084,1.22e-13,11;CL:0000827,1.22e-13,11;CL:0000738,5.56e-13,17;CL:0002087,5.56e-13,17;CL:0000988,2.44e-10,32;CL:0002032,2.44e-10,32;CL:0000037,2.44e-10,32;CL:0000837,2.44e-10,32;CL:0002031,6.79e-10,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.62e-08!70;UBERON:0002193!2.15e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.55e-10,23;UBERON:0000974,1.55e-10,23;UBERON:0004807,1.55e-10,23;UBERON:0005058,1.55e-10,23;UBERON:0003351,1.55e-10,23;UBERON:0009113,1.55e-10,23;UBERON:0003295,1.55e-10,23;UBERON:0009722,1.55e-10,23;UBERON:0005562,1.55e-10,23;UBERON:0007690,1.55e-10,23;UBERON:0000072,2.86e-10,27;UBERON:0006562,5.26e-10,24;UBERON:0003408,5.26e-10,24;UBERON:0001557,5.26e-10,24;UBERON:0001042,5.26e-10,24;UBERON:0008814,5.26e-10,24;UBERON:0009145,5.26e-10,24;UBERON:0004177,6.57e-08,29;UBERON:0005057,6.57e-08,29;UBERON:0002193,9.50e-07,48;UBERON:0002405,9.50e-07,48 | |||
|phase1_expression=0,1.74487703819681,0,0,0.500895729946347,0.503637815735669,0.467225281191051,1.93684985162364,3.94208422024667,2.57470978954193,2.39705155515707,1.19658238493005,1.02720437958723,1.04904482902797,0.333109761815663,0.404950534779652,0,0.630924330716475,1.09691546884591,0.84877930359606,0.510259740906419,0.595745707205312,0,0.639969691173627,0.91763712426868,1.72269589234506,0,1.29282739611533,0.380046838912748,0.504060259519861,2.43903561720835,0,0,0,0,0,0,2.92972141515835,0.7813353445238,3.14114246384279,2.35292595212406,3.41522742479223,0,0,0.506884656097573,0.183546752161682,0,0.218025156380447,0,0,0,0,2.18117387875057,0.725362142011344,3.36093799142464,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0.448026887097336,0,0.511290967734173,0.519572009205738,0,0.14084341977668,0,0,0,0.432982082022428,1.01343946190039,0,0.45673551887624,1.29468941823586,0.29688427812965,0,0,0,0,0.352766121407114,0.125666591329675,0.494389935468748,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,0,2.09446706813455,0.510914110417183,1.91704199209472,0.599902730993408,1.14363204365758,0,0,0,0,0,0,0,0.611036183101898,0.248813941220186,0.505445516867349,0,0,0.229902104433473,0.180062129805349,0,0,0.2562274405697,0.0937017245597288,0,0.862271971731369,0.756424320671277,0.175951124163949,0,0.278047249225598,0,1.02891068203972,0.199034266818493,0.702213187313235,0.51469581422943,0.568326998791185,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0,0.660837565967596,0,0.639864751605702,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.658795818896044,0.251335208800269,0,0.58489226135736,1.79763881730844,1.08069024937347,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0.296452627087149,0.500535317148282,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0,1.29708181420028,0.823684239564244,1.43768206527355,0.744281895337007,0,0,0.538192240565737,0.482443521363367,0.369506380333209,0,0.325929952884052,0,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,1.08781136763742,0,0,0,0.117211686592203,0.327869890753351,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0.141940085208269,0.534196811001766,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0.590603785761546,0,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0.388076051348264,0.214337035031592,0.177340233642274,0,0,0,0,0.63549621259146,0,0.49465875882444,0.484393280087717,0.542816324353403,0.835606408021955,0.820704498725306,0.582961673259701,0.18542530201051,0.170870880797853,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0.686334519619568,2.88963330989554,2.51912614182584,2.76399947608848,0,0.474503990371703,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0.388844919875379,0,0,0.747582730219894,0,0.388902376688095,0.258319646955462,0,0.58678619322877,0.2604087696879,0.419437377702843,0,0.288030006257865,0,0,0.718976700153791,0.389762468933385,0.716106782669926,0.79472541912506,1.32214994471966,1.03382669022204,0.605798699688886,0.914481679859998,1.20991422164209,0.779663045918019,1.15454209968395,1.40252282617883,0,0.443971906748129,0.986852422704233,0.839423081820392,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,0,0,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0.37456602987953,0.320125762024346,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.532427418478012,0,0.145346416632329,0.188218760830661,0,0.365855945745545,0.789209134313529,0.543216455383447,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p6@Rap2c | |||
}} |
Revision as of 19:51, 14 September 2013
Short description: | p6@Rap2c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rap2c_5end |
Coexpression cluster: | NA |
Association with transcript: | 78bp_to_ENSMUST00000053593, NM_172413, uc009tds.1_5end |
EntrezGene: | Rap2c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.55e-10 | 23 |
neck | 1.55e-10 | 23 |
respiratory system epithelium | 1.55e-10 | 23 |
hemolymphoid system gland | 1.55e-10 | 23 |
pharyngeal epithelium | 1.55e-10 | 23 |
thymic region | 1.55e-10 | 23 |
pharyngeal gland | 1.55e-10 | 23 |
entire pharyngeal arch endoderm | 1.55e-10 | 23 |
thymus primordium | 1.55e-10 | 23 |
early pharyngeal endoderm | 1.55e-10 | 23 |
segment of respiratory tract | 2.86e-10 | 27 |
pharynx | 5.26e-10 | 24 |
gland of gut | 5.26e-10 | 24 |
upper respiratory tract | 5.26e-10 | 24 |
chordate pharynx | 5.26e-10 | 24 |
pharyngeal arch system | 5.26e-10 | 24 |
pharyngeal region of foregut | 5.26e-10 | 24 |
hemopoietic organ | 6.57e-08 | 29 |
immune organ | 6.57e-08 | 29 |
hemolymphoid system | 9.50e-07 | 48 |
immune system | 9.50e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.