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FFCP PHASE1:Mm9::chrX:58146612..58146615,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20675|HGNC=|UniProt=A2AM37,Q5RKW0|association_with_transcript=-7bp_to_ENSMUST00000135107,NM_009237,uc009vff.1_5end|description=CAGE_peak_1_at_Sox3_5end|id=chrX:58146612..58146615,-|ontology_enrichment_celltype=CL:0000540!4.93e-17!33;CL:0000047!4.93e-17!33;CL:0000031!4.93e-17!33;CL:0000404!4.93e-17!33;CL:0000221!6.59e-17!44;CL:0000133!6.59e-17!44;CL:0002319!1.78e-16!43;CL:0000393!5.45e-12!39;CL:0000211!5.45e-12!39;CL:0000117!7.77e-12!23;CL:0000337!7.77e-12!23;CL:0000055!1.17e-11!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.23e-19,33;CL:0000047,1.23e-19,33;CL:0000031,1.23e-19,33;CL:0000404,1.23e-19,33;CL:0000221,2.19e-18,44;CL:0000133,2.19e-18,44;CL:0002319,7.50e-18,43;CL:0000393,8.45e-15,39;CL:0000211,8.45e-15,39;CL:0000117,5.46e-14,23;CL:0000337,5.46e-14,23;CL:0000107,8.61e-08,9;CL:0002609,3.49e-07,6;CL:0002321,5.20e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.53e-23!73;UBERON:0005743!1.53e-23!73;UBERON:0000073!9.36e-23!75;UBERON:0001016!9.36e-23!75;UBERON:0004121!2.98e-19!102;UBERON:0000924!2.98e-19!102;UBERON:0006601!2.98e-19!102;UBERON:0002346!5.03e-16!71;UBERON:0003075!5.03e-16!71;UBERON:0007284!5.03e-16!71;UBERON:0001049!9.86e-14!52;UBERON:0005068!9.86e-14!52;UBERON:0006241!9.86e-14!52;UBERON:0007135!9.86e-14!52;UBERON:0003056!2.03e-13!49;UBERON:0000033!2.51e-13!63;UBERON:0000955!2.03e-11!50;UBERON:0006238!2.03e-11!50;UBERON:0002616!2.47e-11!49;UBERON:0003080!6.17e-11!40;UBERON:0002780!1.28e-10!39;UBERON:0001890!1.28e-10!39;UBERON:0006240!1.28e-10!39;UBERON:0002020!1.59e-08!34|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.63e-21,73;UBERON:0001016,8.90e-20,75;UBERON:0004121,1.79e-19,95;UBERON:0000924,1.79e-19,95;UBERON:0006601,1.79e-19,95;UBERON:0002346,4.83e-17,64;UBERON:0003075,4.83e-17,64;UBERON:0007284,4.83e-17,64;UBERON:0010371,7.42e-14,73;UBERON:0003056,3.17e-12,49;UBERON:0010314,4.56e-12,92;UBERON:0000073,1.36e-11,54;UBERON:0001049,1.72e-11,52;UBERON:0005068,1.72e-11,52;UBERON:0006241,1.72e-11,52;UBERON:0007135,1.72e-11,52;UBERON:0003080,5.72e-09,40;UBERON:0002616,9.26e-09,46;UBERON:0002780,1.32e-08,39;UBERON:0001890,1.32e-08,39;UBERON:0006240,1.32e-08,39;UBERON:0000955,2.24e-08,47;UBERON:0006238,2.24e-08,47;UBERON:0002410,8.61e-08,9;UBERON:0002020,9.76e-07,34|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.84890562969608,0,0.194429899074283,0.699932108126813,15.8127820801469,0,0,0,0,0,0,29.1335703637821,28.0365219014177,26.6209189472595,1.35537812827653,0.889294796111139,0,0,0,21.2716078468067,44.9535417226219,59.8289063019916,43.7419240194678,50.0573408016289,11.9973413449598,6.84692476950002,26.0905402327852,28.1785684793615,26.6573448116906,0,2.55374676170375,1.84327839907492,18.4640802822271,15.186948838,21.8783615633839,1.3959149950069,0.56276261003168,1.5279824777681,9.1334861496837,7.54569908235246,6.71038004971082,0,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,4.3661460130771,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.691846491768175,0.60289056221049,0.587943535678524,0,0.247194967734374,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,1.9472783122627,0.915001205637253,8.79580464790051,0.521472960576829,0.511430914660661,1.45451631191692,3.89379031362618,0.203678727700633,0,0,0,18.3469824577412,13.7941262660084,8.28285797104606,7.08312643827861,14.4237378200815,16.3985561964608,16.1166966242734,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0.59710280045548,0,0,0,9.52778553663309,14.0715635988658,8.4629168886677,6.8655973319711,2.36117078096885,1.69693824176116,0.697601834251224,0,0,0,0,0,0,0,0,1.26173969138476,15.6415010816512,0,0,0,0.928946687441754,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,1.00534083520108,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.339490171550376,0,0,0.476087281772027,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,1.99259867206745,0,0,11.6738041184015,15.2271110275689,30.5901224780574,13.3822526853429,11.5855310522845,11.3230612315533,12.9539424535966,7.89090816360542,10.6727700045561,0.642642632843614,16.3231097989509,2.31485284767432,1.46598263418218,17.8167732810338,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,46.455762260078,67.5252329345979,27.2208034490122,8.86701168211368,8.38333442729732,7.73380396829969,9.43841342255258,0.938686832254841,2.96564899209348,0.220528398054962,0,0,0.120625849856312,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.324016022465404,0,0.218362563746178,0.269728692769641,0.495920734352016,0,0,0,6.20062232552609,0.747582730219894,2.48187735685646,1.16670713006429,0.516639293910924,0.506868376472335,1.17357238645754,23.8274024264429,48.969313846807,10.8712854371703,4.89651010638371,0.316011120628178,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,3.99574716073316,10.7656627931371,2.68615386182526,0,1.12609485270709,0.36630324853453,0,0,0.564751842617067,0.920650473014354,1.14579102687879,1.3748254587495,0,0.755393897389701,0,0,0.453142408984205,1.03552062350364,43.9020480281067,23.9414924040619,14.3416228833473,3.8897074730927,7.75568701723535,1.83843508450014,1.33348036680969,1.03017528619447,1.92551525755089,2.52697211763797,1.52087579934144,2.07488975524684,1.31098110457835,1.53660365771686,1.83793500657962,1.90517476513229,1.73826488917283,1.54327376370964,2.06042950401653,1.76638704161277,1.02860775715625,1.77475806159337,0.953744759789284,1.30811774969096,1.31753132581463,1.4384483341585,2.37806364734604,1.57841826862706,1.35804113845862,1.12228454331548,1.89816028998679,1.0835493061312,2.86461730218783,0.619747364743864,2.12197272079256,7.49431733813838,0.701794825336225,1.71896843238639,0.57386499620653,0.661774257358546,0|short_description=p1@Sox3}}
|EntrezGene=20675
|HGNC=
|UniProt=A2AM37,Q5RKW0
|association_with_transcript=-7bp_to_ENSMUST00000135107,NM_009237,uc009vff.1_5end
|description=CAGE_peak_1_at_Sox3_5end
|id=chrX:58146612..58146615,-
|ontology_enrichment_celltype=CL:0000540!4.93e-17!33;CL:0000047!4.93e-17!33;CL:0000031!4.93e-17!33;CL:0000404!4.93e-17!33;CL:0000221!6.59e-17!44;CL:0000133!6.59e-17!44;CL:0002319!1.78e-16!43;CL:0000393!5.45e-12!39;CL:0000211!5.45e-12!39;CL:0000117!7.77e-12!23;CL:0000337!7.77e-12!23;CL:0000055!1.17e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.23e-19,33;CL:0000047,1.23e-19,33;CL:0000031,1.23e-19,33;CL:0000404,1.23e-19,33;CL:0000221,2.19e-18,44;CL:0000133,2.19e-18,44;CL:0002319,7.50e-18,43;CL:0000393,8.45e-15,39;CL:0000211,8.45e-15,39;CL:0000117,5.46e-14,23;CL:0000337,5.46e-14,23;CL:0000107,8.61e-08,9;CL:0002609,3.49e-07,6;CL:0002321,5.20e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.53e-23!73;UBERON:0005743!1.53e-23!73;UBERON:0000073!9.36e-23!75;UBERON:0001016!9.36e-23!75;UBERON:0004121!2.98e-19!102;UBERON:0000924!2.98e-19!102;UBERON:0006601!2.98e-19!102;UBERON:0002346!5.03e-16!71;UBERON:0003075!5.03e-16!71;UBERON:0007284!5.03e-16!71;UBERON:0001049!9.86e-14!52;UBERON:0005068!9.86e-14!52;UBERON:0006241!9.86e-14!52;UBERON:0007135!9.86e-14!52;UBERON:0003056!2.03e-13!49;UBERON:0000033!2.51e-13!63;UBERON:0000955!2.03e-11!50;UBERON:0006238!2.03e-11!50;UBERON:0002616!2.47e-11!49;UBERON:0003080!6.17e-11!40;UBERON:0002780!1.28e-10!39;UBERON:0001890!1.28e-10!39;UBERON:0006240!1.28e-10!39;UBERON:0002020!1.59e-08!34
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.63e-21,73;UBERON:0001016,8.90e-20,75;UBERON:0004121,1.79e-19,95;UBERON:0000924,1.79e-19,95;UBERON:0006601,1.79e-19,95;UBERON:0002346,4.83e-17,64;UBERON:0003075,4.83e-17,64;UBERON:0007284,4.83e-17,64;UBERON:0010371,7.42e-14,73;UBERON:0003056,3.17e-12,49;UBERON:0010314,4.56e-12,92;UBERON:0000073,1.36e-11,54;UBERON:0001049,1.72e-11,52;UBERON:0005068,1.72e-11,52;UBERON:0006241,1.72e-11,52;UBERON:0007135,1.72e-11,52;UBERON:0003080,5.72e-09,40;UBERON:0002616,9.26e-09,46;UBERON:0002780,1.32e-08,39;UBERON:0001890,1.32e-08,39;UBERON:0006240,1.32e-08,39;UBERON:0000955,2.24e-08,47;UBERON:0006238,2.24e-08,47;UBERON:0002410,8.61e-08,9;UBERON:0002020,9.76e-07,34
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.84890562969608,0,0.194429899074283,0.699932108126813,15.8127820801469,0,0,0,0,0,0,29.1335703637821,28.0365219014177,26.6209189472595,1.35537812827653,0.889294796111139,0,0,0,21.2716078468067,44.9535417226219,59.8289063019916,43.7419240194678,50.0573408016289,11.9973413449598,6.84692476950002,26.0905402327852,28.1785684793615,26.6573448116906,0,2.55374676170375,1.84327839907492,18.4640802822271,15.186948838,21.8783615633839,1.3959149950069,0.56276261003168,1.5279824777681,9.1334861496837,7.54569908235246,6.71038004971082,0,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,4.3661460130771,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.691846491768175,0.60289056221049,0.587943535678524,0,0.247194967734374,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,1.9472783122627,0.915001205637253,8.79580464790051,0.521472960576829,0.511430914660661,1.45451631191692,3.89379031362618,0.203678727700633,0,0,0,18.3469824577412,13.7941262660084,8.28285797104606,7.08312643827861,14.4237378200815,16.3985561964608,16.1166966242734,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0.59710280045548,0,0,0,9.52778553663309,14.0715635988658,8.4629168886677,6.8655973319711,2.36117078096885,1.69693824176116,0.697601834251224,0,0,0,0,0,0,0,0,1.26173969138476,15.6415010816512,0,0,0,0.928946687441754,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,1.00534083520108,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.339490171550376,0,0,0.476087281772027,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,1.99259867206745,0,0,11.6738041184015,15.2271110275689,30.5901224780574,13.3822526853429,11.5855310522845,11.3230612315533,12.9539424535966,7.89090816360542,10.6727700045561,0.642642632843614,16.3231097989509,2.31485284767432,1.46598263418218,17.8167732810338,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,46.455762260078,67.5252329345979,27.2208034490122,8.86701168211368,8.38333442729732,7.73380396829969,9.43841342255258,0.938686832254841,2.96564899209348,0.220528398054962,0,0,0.120625849856312,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.324016022465404,0,0.218362563746178,0.269728692769641,0.495920734352016,0,0,0,6.20062232552609,0.747582730219894,2.48187735685646,1.16670713006429,0.516639293910924,0.506868376472335,1.17357238645754,23.8274024264429,48.969313846807,10.8712854371703,4.89651010638371,0.316011120628178,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,3.99574716073316,10.7656627931371,2.68615386182526,0,1.12609485270709,0.36630324853453,0,0,0.564751842617067,0.920650473014354,1.14579102687879,1.3748254587495,0,0.755393897389701,0,0,0.453142408984205,1.03552062350364,43.9020480281067,23.9414924040619,14.3416228833473,3.8897074730927,7.75568701723535,1.83843508450014,1.33348036680969,1.03017528619447,1.92551525755089,2.52697211763797,1.52087579934144,2.07488975524684,1.31098110457835,1.53660365771686,1.83793500657962,1.90517476513229,1.73826488917283,1.54327376370964,2.06042950401653,1.76638704161277,1.02860775715625,1.77475806159337,0.953744759789284,1.30811774969096,1.31753132581463,1.4384483341585,2.37806364734604,1.57841826862706,1.35804113845862,1.12228454331548,1.89816028998679,1.0835493061312,2.86461730218783,0.619747364743864,2.12197272079256,7.49431733813838,0.701794825336225,1.71896843238639,0.57386499620653,0.661774257358546,0
|short_description=p1@Sox3
}}

Revision as of 19:58, 14 September 2013

Short description:p1@Sox3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sox3_5end
Coexpression cluster:NA
Association with transcript: -7bp_to_ENSMUST00000135107, NM_009237, uc009vff.1_5end
EntrezGene:Sox3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Sox3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C329.13
Mouse Granule cells, donor2.CNhs12357.11731-123E328.04
Mouse Granule cells, donor3.CNhs12108.11636-122C726.62
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C821.27
Mouse Microglia, donor2.CNhs12634.11736-123E844.95
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D559.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F543.74
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D950.06
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D226.09
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F228.18
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.88
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F18.80
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C618.35
eyeball, embryo E14.CNhs10521.399-16E213.79
eyeball, embryo E15.CNhs10593.426-16C98.28
eyeball, embryo E17.CNhs11023.1261-18D47.08
eyeball, neonate N00.CNhs11207.633-15C614.42
eyeball, neonate N01.CNhs11140.1532-43E716.40
eyeball, neonate N02.CNhs11205.1551-44G816.12
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E99.53
heart, embryo E12.CNhs11015.353-12F514.07
heart, embryo E13.CNhs11013.376-3I98.46
heart, embryo E14.CNhs10597.403-26D46.87
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G115.64
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.23
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E330.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.38
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.59
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.32
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.95
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.67
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I716.32
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G617.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E646.46
pituitary gland, embryo E13.CNhs11009.370-44C767.53
pituitary gland, embryo E14.CNhs11037.398-44A527.22
pituitary gland, embryo E15.CNhs10592.427-16B98.87
pituitary gland, embryo E16.CNhs11036.449-43F68.38
pituitary gland, embryo E17.CNhs11039.1265-44F57.73
pituitary gland, neonate N00.CNhs11190.1308-22E99.44
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I423.83
testis, neonate N10.CNhs11204.763-44D948.97
testis, neonate N20.CNhs11110.839-18H310.87
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I843.90
whole body, embryo E12.CNhs10587.857-27C923.94
whole body, embryo E13.CNhs10512.372-23H214.34
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B17.76
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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