Coexpression cluster:C2418: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=-0.434013708258886,-0.154549780610293,-0.270587677523357,-0.28768436552684,-0.403161125431652,0.266963454997756,-0.450389905209962,0.0855808750292295,-0.433554184074677,0.352828340506841,0.99426161720307,0.443529500227378,0.454449043219167,0.446593269512899,0.503797441036319,0.360716536362664,0.308162993767673,0.390044689427128,0.273584341843451,0.426927196270239,0.70923008163395,0.356461239578495,0.363247328966717,0.621480449152683,0.394426121940536,-0.268405852283792,-0.25250070521403,-0.349163778747551,-0.588873497383035,-0.588873497383035,-0.401377568449273,0.941961732225687,1.08523827549718,1.20755691413787,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.549184375647286,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.351890240374847,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.454681802421144,-0.511702566861818,-0.588873497383035,-0.490267352419326,-0.478682814890144,-0.588873497383035,-0.393191608587406,-0.488552582103308,-0.46555694899689,-0.405969204084729,-0.588873497383035,-0.588873497383035,-0.477838130815181,-0.588873497383035,-0.473476862528857,-0.322207190144212,-0.44078595625167,-0.444202164298457,-0.588873497383035,-0.363233682436265,-0.424385086793938,-0.398574966152038,-0.436425566777043,-0.400205457478505,-0.407457255664552,-0.458576724752656,-0.535888603000871,-0.433203124266235,-0.52882321448688,-0.537392518852341,-0.588873497383035,-0.425450042686444,-0.447982082623028,-0.588873497383035,-0.539894549249006,-0.46877181727308,-0.588873497383035,-0.588873497383035,-0.558416008246647,-0.588873497383035,-0.588873497383035,-0.496582008682825,-0.588873497383035,-0.548992318954006,-0.485946021096768,-0.530134618805779,0.280627106696781,0.166613064002556,0.310389193546963,-0.0538592392511598,-0.186854175550132,0.0131901890776675,-0.200548171046648,-0.0531776380361193,0.472598147462745,0.527026911498928,0.56252534188729,0.1955956417951,1.20287378061089,0.971838717393612,-0.0262879130901174,-0.0707174121316395,0.0049674112154332,-0.588873497383035,-0.588873497383035,-0.52028232025856,0.177123510455971,0.238466597932948,0.39668631243909,0.215513930529204,0.369481921956892,0.240036509832551,0.292677538507564,0.259764865639632,0.406224345198684,-0.0731219562475238,0.343378280139745,0.10633401989518,0.429510981948146,0.119426417787225,0.40579804894983,0.0597542710282809,0.030722013083685,-0.040717377218098,-0.0848011155192484,0.167059463855394,0.0943397401536331,-0.588873497383035,-0.588873497383035,1.07103607403731,0.251948326120284,0.335563190531937,0.269061577977249,0.520230716872281,0.21284626794888,0.409442613338741,0.434525437979167,0.773569064670498,0.0529588298291656,0.475591494677993,0.23475684611684,0.181645136730575,0.238787191123142,0.158349337227116,0.30475304016729,0.362745669304926,0.0734105236334023,0.0875213235115284,-0.0687249396876425,-0.018014683922291,0.14602439975598,0.258576385237742,0.0642698278342492,-0.023751168373983,0.128021398499076,0.583314132905478,0.725490143363972,0.0802361599470558,0.143367753041547,0.178651530221112,0.0713455408479915,0.157608445701737,0.0858505340637739,0.51012259121404,0.686595773987462,0.111665516045205,0.154493527948766,0.682433107945427,0.0458537822001426,0.508788632640434,0.422371957685867,0.755866049144627,0.250497065486079,0.452085228419518,-0.0095710100006255,0.120076741622021,0.75137077914389,0.319305445694539,0.407082284860952,0.792695613124486,0.667437814199605,0.785943955634002,-0.273826790531026,-0.373663045650287,-0.299256001657082,-0.207271046889392,-0.28612671300245,-0.46985612960888,0.667517115836781,0.762841601963082,0.88962425163016,0.300145230262599,0.238883693819473,0.175497412669136,0.221112338031081,0.0773458169658673,0.255178579808562,0.225958868709727,0.201936906735825,0.0756293503191384,-0.0075165357992091,0.223517511049688,0.533493627506421,0.88105976528151,0.83471155330895,0.654075091726054,-0.588873497383035,-0.588873497383035,-0.250102391053101,-0.588873497383035,-0.227445976062183,0.75646033608546,0.913295048077822,1.18147993078485,0.76959756890209,0.881205188422798,0.0940226900606425,0.0297555812670038,0.636680973401676,0.610503799117643,0.674255404871481,0.487734982106194,0.506289894581783,0.283574304498984,0.105821357856956,0.0794297818855443,-0.541076660675581,0.237082256207947,0.094107736349064,0.587096374705627,0.856622630802091,0.617742405446496,1.00520100900945,0.922000053717504,1.1151322371341,-0.401483911615183,-0.250904059976106,0.369866010698138,0.453293915940165,0.480628682639007,0.0274465791638542,0.757976930589479,0.471444031091672,0.638718265600341,0.519055309782243,0.704723188031205,0.0724243906867182,0.439327645963119,-0.104186595456147,0.297431913372327,0.423525882426507,0.459223169707092,0.376202688394775,0.388239235751178,0.544976759206594,0.346444407646139,0.647152544214456,0.713844980281103,0.272451267370037,0.240450838948631,0.354881944932861,0.256409993591649,0.258330580898558,0.275150414463882,0.932945213663272,0.849305402098908,0.91174896084947,-0.281873622842566,-0.337460263356493,-0.208417586086651,0.836279120988405,0.485211741993697,0.825076054229407,0.381209107344044,0.801169869496515,0.703431913210401,-0.542735458202668,-0.510768186730748,-0.546473225933154,-0.391514803119933,0.135865768810279,-0.226881664408868,-0.149626308948525,0.200136489373402,-0.149421684741214,-0.588873497383035,-0.588873497383035,-0.588873497383035,0.157206086583314,0.409551559441012,0.418414353938256,0.568877849354789,0.558489997333754,0.459462833997821,0.592696064504389,0.301319713482519,0.240693123591003,0.176972256346532,0.335734603491768,0.41473114824712,0.156062533383247,0.698366458369111,0.421067517682904,-0.588873497383035,-0.504042007640324,-0.544832773256609,-0.0149075610722366,0.188775359136902,0.183060509366493,-0.195079306950461,0.0744237752223235,-0.116904366414735,0.0640739314933698,-0.00285812376464545,0.045383032146125,0.219054179431076,-0.00688414081662505,0.00685979544341955,0.141999727673469,-0.0963754773850967,0.102533264726132,-0.281615493628797,0.968715822217932,0.950165611510562,-0.104993181782601,-0.0073521600195008,-0.18028211428852,1.16127699099764,0.854136100873309,1.35851892024455,1.11381343682651,0.855237493987427,0.668408023133817,0.56463762195104,0.689328727836155,0.749659175688188,1.10834932980586,1.31904002859478,0.982552827969886,1.058807643479,1.08764880035911,-0.588873497383035,-0.588873497383035,0.566060186576739,0.720098397996586,0.823540711858997,-0.0125952181850346,-0.222773467456707,-0.275472541071754,0.78588331455803,0.889260095468146,0.209322128323584,0.0705440214905727,0.277103243415796,0.189266544961053,0.0682955260024638,-0.187503611173001,0.0934593268847972,0.194230223089951,-0.203926285528483,0.963483046132588,0.963998416728725,0.984763197768107,0.956095831624779,-0.185284215567425,0.712674795289445,0.153045943560661,0.564802490834536,0.564470060935904,0.146416849381379,0.583443619186612,0.589396112942673,0.429826643492401,0.275877898687248,0.595499124663372,0.777781198496555,0.370887131846575,-0.0305598249555756,0.472066970617472,0.0962823100489184,-0.0656922443551555,0.0104666586046042,0.58317091233468,0.702348348131036,0.281104378271322,0.460476865895323,0.26131234052163,0.557971804069907,-0.0346129508132054,-0.362676659300593,0.177874197462175,-0.0741277296661995,0.217014184410055,0.560350336342106,0.455680932479655,0.298437437803441,0.722913561311386,0.629425393251309,0.721422325145279,0.308583810063914,0.459079312731691,0.704437334849381,0.418236717427267,-0.0835870989046852,-0.479004004111881,0.261063362821411,0.0816277893207889,1.00216688033027,0.989023450271511,1.06613082320671,-0.0188797045455265,1.14916565563424,1.11034206576358,1.21736002352693,1.00330957189175,-0.588873497383035,-0.488464830072285,-0.588873497383035,-0.542472525048666,-0.514054245286815,-0.588873497383035,-0.588873497383035,-0.488464830072285,-0.444386234496614,-0.488464830072285,0.445876721463307,-0.455665779647854,-0.588873497383035,-0.588873497383035,-0.325708649670221,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.488464830072285,-0.525550754670187,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.460634098892732,-0.588873497383035,-0.545040257093258,-0.588873497383035,-0.488464830072285,-0.535539067711374,-0.588873497383035,-0.588873497383035,-0.526446699322532,-0.588873497383035,-0.0904627094727026,0.0956806150514778,-0.225177328234883,-0.465130238710008,0.463177993215717,0.0110274512657955,0.0562586598123919,0.0282617335669112,-0.454681802421144,-0.266039365092241,0.707291714668945,0.0383257744883375,-0.470790843906443,0.500627855450238,-0.167701584705279,-0.488464830072285,0.479917763298994,-0.493296341035424,0.52354277883498,0.719254212927603,-0.00558802232811949,-0.588873497383035,0.125527830774077,-0.588873497383035,0.823561600715455,-0.254389753463989,-0.35481018354508,-0.139315538068926,0.0269343051648732,-0.0317425534830977,-0.266234786520847,0.700687716253012,0.621498509411196,-0.0623044686353596,-0.374587435465157,-0.588873497383035,-0.298698876078804,-0.451132431129137,-0.208907730694805,-0.521055173961403,-0.25209344920337,-0.197929862182851,-0.13673601964395,-0.140430498576782,0.502739363728195,-0.00410067438209825,0.523648797628599,-0.173368382297398,-0.326590476139857,-0.245983133030537,0.272588960262958,0.284406281849894,0.267067715526091,-0.454681802421144,-0.505075904776572,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,-0.588873497383035,0.844682039422649,0.591266212667065,-0.418723000472392,-0.588873497383035,0.179098577703154,0.051049309023347,0.04281152294535,-0.532483698074224,-0.538275705415141,-0.5673059827283,-0.421478229853161,-0.326734811753955,-0.234512492064611,-0.516088952767705,0.451616175406532,0.624135228209367,-0.113786448820985,0.0164996170592693,-0.175059148396795,-0.242294490049485,-0.450964547295657,-0.457253204404553,0.976878425634744,0.890941438992529,0.862936141937564,0.953950616462108,0.814173457776388,0.81199412085556,-0.0688640284925368,0.727758745048382,0.845652955345995,0.00655411271116036,0.205846138918157,0.060175691840765,0.126556627642235,0.0927090963789827,0.0100910915572888,-0.502569770299285,-0.191792502549301,0.841771322253878,0.585263255445166,-0.269623066275494,0.265991052832966,0.548290526416389,0.348746687408458,0.779934865439265,0.0356096831861734,-0.286951011495675,-0.588873497383035,0.0323671522109435,0.885195842265357,0.735023645861079,0.777785644162812,0.780770760188988,0.0776647180805022,0.0528482890786426,-0.486756473211867,-0.345428009100058,-0.588873497383035,0.971968932892889,-0.538191190116716,-0.238045622772074,0.027062095282298,-0.202241490598076,-0.0406247825711916,-0.174191682942817,-0.186095809025212,-0.189893184135623,0.269072467316524,-0.454681802421144,-0.555939329984182,-0.554479350935947,-0.574709177204074,-0.0201263176416456,-0.588873497383035,-0.341329086345623,-0.183416299692892,-0.361777248818787,-0.238830710460418,-0.24209724494064,-0.544810081145391,-0.588873497383035,-0.201347155174522,0.55867766018447,0.198825075869246,0.193740200113663,0.632942067128567,-0.0914591117347722,0.684207523320995,-0.060043085491028,-0.349028415902119,-0.331579590080737,0.3877702692613,0.832634070320788,0.349954579826274,0.964352233069642,-0.555862489994636,0.560690678631615,0.548287955695787,-0.53305669133742,-0.588873497383035,-0.223835019920187,-0.225784809524135,0.467046962528302,0.455399625920053,0.284558077599318,0.196313302158822,0.348434355167619,-0.360907106043539,-0.376984972821626,-0.407650968678383,0.498797335523165,-0.588873497383035,-0.500628214889277,-0.530844457830597,-0.588873497383035,-0.301896379275739,-0.313316109274281,-0.195968953087504,-0.239023800977535,-0.233967728058479,-0.257058056736668,-0.221534993463157,-0.46509496470861,0.956948677288754,-0.247065146583218,0.0256228261469661,0.872382192071033,-0.422048374258454,-0.148400698875823,-0.290143062333357,-0.332794232088993,-0.169909610151295,0.491203596227189,0.262524472805398,0.396164737609586,0.212424098274741,0.284451026878187,-0.320933460605217,0.0408797154010249,0.519103350586748,0.519803115230271,0.483673790398742,0.073672550109332,0.762355014183634,0.820899576526742,0.911876724328565,1.07402922320016,0.625945894990831,0.36523264132735,0.871548646839368,0.782012351061705,0.718860541489652,0.514444482154865,-0.424362852306519,-0.477060771707908,0.807168686427065,0.81519620080473,0.821399354881886,0.828396367808286,0.768688188402426,0.768946577090136,0.85772034090117,0.943830509710459,0.830620979137979,0.590820955952759,0.774701758567472,0.695421953375722,0.723441762435043,0.409314511227898,0.461404212506816,1.05980303676119,-0.251594392208777,-0.38895907333113,-0.496320758946099,-0.494521236892655,0.665064615438931,0.655083120910527,0.806629211708526,-0.388183219171772,-0.544846832906542,-0.410807592114394,0.676756512299847,-0.209177258003978,0.873462173808174,1.03157422238228,-0.219283260540037,-0.453813873976973,-0.588873497383035,-0.451363603280135,-0.588873497383035,-0.588873497383035,-0.472142005749911,-0.396126309538113,0.236206380307874,-0.588873497383035,-0.475261413128561,0.100547369258635,0.424820693362429,-0.270184466549533,-0.488464830072285,-0.308569593700821,-0.202940915159122,-0.166128977434199,-0.225995563007576,-0.126851317456888,-0.454681802421144,0.319386078484207,-0.285906324302238,0.802869575162752,0.734412899004828,0.752020302973084,0.157981151400229,-0.54947907912127,-0.0497651594244081,0.465650515563812,-0.253633773917181,-0.118578789148458,0.921819912320563,0.775674211217797,-0.280459443650598,-0.363123348427863,-0.222849373383732,-0.328196805081356,-0.39939025568978,-0.240617807619255,0.163341603844501,-0.47320434338393,0.587193917764762,-0.0926024547503461,-0.0425638128104322,-0.0685535519686949,-0.055218005759373,0.186662770401666,-0.498803182402583,0.680690281480088,-0.365069418153491,-0.193807367689907,0.652210561421663,0.538787478420449,-0.0244530052633831,-0.241622568457464,-0.186830981948658,-0.0174407452850389,0.85549788996867,0.538403689294775,0.0682992226208946,-0.450649343667131,-0.443074387550971,-0.489266385065962,-0.215863759907155,1.09087020713421,0.935248205918147,0.723039645760829,-0.287666275000398,0.194371652280626,0.141927360305099,-0.202472490320454,0.95006355679754,1.04048202212402,1.00288693150296,0.354312958809473,-0.0777765928031694,0.122041323315318,-0.378808853386285,-0.152981614892111,-0.151696900484545,-0.170492303476194,-0.0979840267107923,-0.195438972280341,-0.488464830072285,-0.542399372437509,-0.466569394302314,-0.177409632834468,-0.0471151846100188,0.0944936993689255,-0.488464830072285,-0.0220244312154641,-0.225064503996202,-0.287361322131619,-0.312150000270911,-0.136803016856912,0.409707200243225,-0.167418878745702,-0.086734898506865,-0.413833921511467,0.814302834198651,0.687861461082398,0.146709433922255,-0.0102840082304588,-0.210138563705006,-0.360321280897699,-0.469768408263432,-0.214839428654308,-0.155823372058833,-0.173825041256598,-0.228193750649473,-0.211107166022175,-0.0119960280223643,-0.133925595078648,-0.588873497383035,-0.33647952201707,-0.306047658770001,-0.437039265405827,-0.304715680648751,-0.418513365538657,-0.239026484642376,-0.332662870839878,-0.553612690277972,-0.380084561034914,-0.106598068439863,0.127675961612991,-0.330933902039806,-0.269928132831554,0.45614139402142,0.368819999158656,0.272174337495859,-0.0029138368749782,-0.218900678772347,-0.12123827318346,0.160233215419611,-0.250196669685303,0.716710632483957,0.735015789557371,0.572815159687437,0.575428231347255,-0.192392265111961,0.0424573594727854,-0.0908049160295799,-0.221235553910053,-0.269712566635715,-0.420920615392371|full_id=C2418_Renal_Urothelial_salivary_Corneal_Bronchial_Mammary_Keratinocyte|id=C2418|ontology_enrichment_celltype=CL:0000066!4.76e-39!253;CL:0002321!4.47e-33!250;CL:0000222!3.69e-16!121;CL:0000076!1.71e-13!63;CL:0002076!2.10e-12!42;CL:1000497!2.83e-10!17;CL:0002518!2.83e-10!17;CL:0000548!8.57e-10!679;CL:0000255!8.57e-10!679;CL:1000449!1.38e-09!15;CL:0000223!2.49e-09!58;CL:0000077!4.98e-09!19;CL:0002077!5.78e-08!34;CL:0002368!5.91e-08!13;CL:1000507!8.21e-08!10;CL:1000494!8.21e-08!10;CL:0002681!9.49e-08!12;CL:0002584!9.49e-08!12;CL:0000213!1.03e-07!58;CL:0000215!1.03e-07!58;CL:0000183!1.22e-07!59;CL:0000055!1.41e-07!106;CL:0000075!2.34e-07!27;CL:0000680!4.30e-07!58;CL:0000056!4.30e-07!58;CL:0000355!4.30e-07!58;CL:0000221!5.70e-07!72|ontology_enrichment_disease=DOID:193!8.92e-08!29;DOID:120!9.15e-08!27|ontology_enrichment_uberon=UBERON:0000475!2.29e-19!264;UBERON:0000481!1.19e-15!342;UBERON:0000119!1.91e-15!309;UBERON:0000483!3.32e-15!306;UBERON:0002100!2.24e-14!199;UBERON:0000467!2.98e-12!624;UBERON:0000477!3.51e-12!373;UBERON:0000480!4.19e-12!625;UBERON:0003104!8.63e-12!160;UBERON:0009142!8.63e-12!160;UBERON:0000468!1.37e-11!656;UBERON:0003914!4.11e-11!117;UBERON:0000490!6.57e-10!148;UBERON:0004211!1.38e-09!15;UBERON:0009773!1.38e-09!15;UBERON:0001231!1.38e-09!15;UBERON:0001285!1.38e-09!15;UBERON:0007684!1.38e-09!15;UBERON:0004208!1.38e-09!15;UBERON:0005256!1.92e-09!122;UBERON:0007503!2.06e-09!78;UBERON:0000486!2.21e-09!83;UBERON:0002049!3.94e-09!78;UBERON:0007798!3.94e-09!78;UBERON:0006555!4.11e-09!16;UBERON:0004819!4.11e-09!16;UBERON:0001048!6.92e-09!160;UBERON:0005177!1.00e-08!101;UBERON:0000353!1.22e-08!15;UBERON:0003102!3.31e-08!99;UBERON:0004119!5.36e-08!160;UBERON:0000925!5.36e-08!160;UBERON:0006595!5.36e-08!160;UBERON:0004111!6.00e-08!240;UBERON:0001851!6.07e-08!15;UBERON:0000464!7.08e-08!95;UBERON:0004810!8.21e-08!10;UBERON:0001225!9.49e-08!12;UBERON:0008987!9.49e-08!12;UBERON:0005085!9.71e-08!31;UBERON:0000064!1.18e-07!218;UBERON:0000922!1.30e-07!592;UBERON:0006554!1.81e-07!47;UBERON:0000055!2.88e-07!68;UBERON:0001008!3.27e-07!48;UBERON:0003100!3.84e-07!41;UBERON:0002329!4.21e-07!71;UBERON:0003059!4.21e-07!71;UBERON:0007282!4.21e-07!71;UBERON:0004290!4.21e-07!71;UBERON:0009618!4.21e-07!71;UBERON:0005423!5.37e-07!581;UBERON:0003077!5.64e-07!72;UBERON:0007285!5.64e-07!72;UBERON:0000466!5.68e-07!117;UBERON:0007524!5.71e-07!73|tf_chipseq_enrich=CTCF#10664;4:5.36025637307503:0.00121114538164362:0.00816965785141628!CTCFL#140690;4:19.7464743589744:6.5732084880439e-06:0.000192836888000791!EP300#2033;4:6.7739417262232:0.000474845982144264:0.0043399351998919!STAT3#6774;4:10.5194649971542:8.16377768286615e-05:0.00123086008000701!TAF1#6872;4:3.34304628574529:0.00800566489870165:0.0321999397810792!TCF7L2#6934;4:10.7701765631373:7.42969445082454e-05:0.00115365723870006!YY1#7528;4:4.91117074985386:0.0017187183805544:0.0106788761346137!ZBTB7A#51341;4:7.3519093078759:0.00034222354001599:0.00346365774742998|tfbs_overrepresentation=0.191353,0.0774498,6.63941e-05,0.0631091,0.257053,0.0761719,0.0569281,0.160638,0.043387,0.0341265,0.181435,2.87481e-05,0.243414,0.164339,0.193153,0.0816702,0.183412,0.128744,0.0698403,0.141416,0.243245,0.172742,0.000226999,0.124486,0.0550418,0.276459,0.268949,0.119094,0.0186717,0.122514,0.00379621,0.149094,0.0239693,0.267529,0.0877018,0.111013,0.0725724,3.20308e-05,0.157159,2.77872e-06,0.126525,0.0326801,0.182216,0.2375,0.157881,0.0480278,0.0503649,0.234372,0.0111479,0.158244,0.19996,0.0715789,0.0924421,0.12203,0.00345151,0.0508907,0.140644,0.00426281,5.3427e-06,0.138225,0.0390464,0.0201872,0.142115,0.0999599,0.0720888,0.0667453,0.00296141,0.0792005,0.113084,0.216289,0.0267205,0.0892037,0.116917,3.00498e-05,0.00995563,0.0227583,0.126543,0.0578308,0.0493551,0.00965832,0.125428,0.005218,0.0562614,0.0118782,0.0114792,8.82537e-09,0.0848546,0.268505,0.00032273,0.0827752,0.112676,0.0655645,0.12511,6.93776e-07,0.112199,0.000638287,4.0355e-06,0.199405,0.121709,0.000988309,0.0759036,0.350158,0.184542,0.0491142,1.34647e-06,0.00149586,2.8272e-06,0.423154,0.187509,5.2115e-06,9.35968e-06,0.0450707,0.194256,0.0235108,0.132631,0.0447483,0.0270258,0.0748174,0.180926,0.110194,0.215858,0.00438921,0.0177346,0.112709,0.134107,0.228632,0.119051,0.0196757,0.110868,0.00104149,0.078637,0.0985137,0.0755515,0.0302655,0.164103,0.141472,0.085537,1.3015e-06,0.000973931,0.0052702,0.0302521,0.166414,0.000279662,0.202388,3.25098e-13,0.0913381,0.129544,0.110696,0.0515825,0.157774,0.258146,0.0186533,0.233377,0.0352845,0.0565357,0.153577,0.0984158,3.08803e-05,0.0683304,0.0447121,0.291455,0.124982,0.152417,0.192028,0.346873,0.149398,2.58641e-05,0.166112,0.0534404,0.392741,0.2321,0.00110921,0.00166778,0.0715212,0.105131,0.118265,5.86235e-05,0.234755,0.0288935,0.0472274,0.205973,0.159869,0.000669689,0.15105,0.0001644,0.155237,0.00267003,0.0532055,0.108938,0.224443,0.140245,0.241581,3.39117e-05,0.292792,0.147332,0.0622664,0.102951,0.0795624,0.0891668,0.14349,0.117261,0.0797088,0.0408965,0.0799774,0.177664,6.15385e-05,0.0687034,0.197158,0.265132,0.0288641,0.0606832,0.136664,0.158184,0.147626,0.393313,0.000127239,0.21271,0.132273,0.0830988,0.134907,0.184613,0.00379585,0.202467,0.000103846,0.0972471,0.165147,5.60999e-05,0.112956,0.0797807,0.0790532,0.675167,1.99053e-09,0.0553945,0.10068,0.125804,0.122288,0.0624687,0.00830961,0.21183,0.275612,0.235571,0.0204686,0.128998,0.109226,0.151958,0.178155,0.107176,0.146021,0.000463842,0.15291,0.206234,0.238926,0.239646,0.128521,0.1286,0.207017,0.14037,0.259646,0.000137922,2.52088e-12,0.0816983,0.226367,0.211672,0.167038,0.0457509,0.106603,0.106727,0.12083,0.154253,0.0993998,9.04626e-05,0.00358623,0.000721125,0.00133086,0.000268173,0.0504034,0.0152877,0.000218453,3.14243e-13,6.20963e-10,0.0479295,0.3024,2.58235e-08,9.91914e-05,1.75807e-06,0.148431,0.0627015,0.186966,0.464128,0.389374,0.0631104,0.414547,0.489273,0.413223,0.000658513,0.720642,0.0678774,0.369161,0.500422,0.147194,0.0305759,5.26874e-06,0.241524,0.0232022,0.234628,0.520726,0.143893,0.0172441,0.00462477,0.524104,0.00400444,0.201843,0.000598342,0.019108,0.624969,0.460819,0.511459,0.000311712,0.322903,0.350886,0.380582,0.583749,0.0150105,0.286293,0.606558,6.0022e-06,0.359128,0.0146894,0.000193862,0.0782875,0.547291,3.94178e-08,0.162437,0.369971,0.000276442,0.537928,0.129952,0.683088,0.0091765,0.235444,1.95885e-14,5.44744e-06,0.000639859,0.349116,0.302142,0.239545,0.019967,0.00401934,0.343881,0.145459,0.239383,5.83992e-16,0.00342662,0.000649544,0.356561,0.573659,0.0241359,0.0883859,0.0962508,0.238465,5.94041e-18,1.30368e-07,2.96447e-05,9.7152e-05,0.0636247,0.651927,1.93353e-06,0.00879043,0.280307,0.393583,1.7255e-10,0.0596868,4.41748e-06,0.293026,2.30284e-13,0.117621,3.70952e-10,0.372182,0.429205,0.578951,0.365653,1.92268e-05,1.05048e-11,0.35234,2.78453e-11,0.525923,0.0474911,0.421082,0.25441,9.17488e-05,3.04207e-07,0.517933,0.0124357,0.517001,0.252778,1.90915e-05,0.419676,0.188259,0.189182,0.00443112,4.4785e-06,0.546448,0.560187,0.321282,0.198207,0.0616078,0.178485,0.329745,0.175552,0.129238,0.651295,0.370995,0.360161,0.429696,0.386216,0.000151946,0.706685,0.606408,0.0181818,0.00116279,0.333725,3.67396e-05,0.289666,0.033464,0.513045,0.452694,0.0523844,2.04354e-12,0.265037,0.000575107,3.64412e-10,1.26411e-07,0.341771,0.424526,1.67324e-05,0.356381,0.184395,0.000197224,9.55014e-07,0.206945,0.304719,0.000460135,0.296994,0.244339,0.117049,0.0786167,0.0789416,0.144936,0.433821,0.64428,0.436806,0.576549,0.499072,0.00283311,0.00246373,0.00183829,0.0919254,0.0735469,0.248103,0.102621,0.0760107,0.187642,0.286156,0.261868,0.541583,0.540322,0.247151,0.146385,0.365815,4.93132e-07,0.00153351,0.164977,0.175633,0.139918,0.00937608,0.0828344,0.00422161,0.0238089,7.99512e-07,0.354433,0.00468928,0.0614918,0.219485,0.149782,0.136923,0.118103,0.113892,0.207214,0.140201,0.0580534,0.00518407,0.161297,0.168389,0.270152,0.249506,0.00274744,0.0660736,0.108971,0.0879235,0.235214,0.145546,0.28124,0.0175667,0.251882,4.57832e-05,0.00293506,0.0637178,0.257309,1.38704e-11,0.0147214,0.227224,0.030904,0.219023,0.115115,0.124916,0.0149794,0.28498,0.140114,0.00100578,0.00641248,0.224626,0.183585,0.271662,0.03989,0.171436,0.05892,0.0691994,0.268299,0.198844,0.104946,0.127738,0.207615,0.161213,0.118999,0.0737069,0.357807,0.254051,0.178782,0.019419,0.0866228,0.271849,0.044355,0.105411,0.0997542,0.0237068,0.248936,0.0725263,0.102587,0.0742013,0.0552936,0.0457886,0.0514927,5.56672e-05,0.220368,0.258624,0.064656,0.0277507,0.000447146,0.0438521,2.98209e-05,0.0439557,0.0522771,0.0787278,0.515487,0.159873,0.142462,0.143935,0.332403,0.0379537,0.0230803,0.187953,0.051459,0.114868,0.0726892,0.18732,0.000708107,0.0429523,0.245002,0.170848,0.00489168,0.302909,0.363016,0.100188,0.223102,0.107653,0.235857,2.26512e-05,0.191914,0.184022,0.216557,0.182956,0.116818,0.389792,0.36316,0.0625685,0.124464,1.86043e-05,0.173134,0.101893,0.142875,0.167635,0.171311,3.56798e-05,0.00885745,0.0685131,0.130287,0.0661526,0.0815772,0.0993937,0.122878,0.187329,0.0451012,0.0976639,0.351199,7.6314e-16,3.806e-08,0.278645,0.011228,0.155708,0.248017,0.22995,0.0227764,0.0760151,0.0629459,0.143933,0.0803251,0.226641,0.379174,0.0939463,0.286748,0.000115768,0.0471607,0.163865,0.226359,1.56354e-14,2.49943e-09,0.265324,0.279778,0.141699,2.88943e-06,2.04677e-05,0.0653269,0.125712,0.00384141,0.0994829,0.0604041,0.144185,0.0925862,0.00516485,0.199201,0.049937,0.172796,0.00180935,0.071232,0.149346,0.00776177,0.22302,0.000482136,2.86237e-09,0.0754883,0.299492,0.100006,0.0756617,0.197817,0.0345492,0.00462092,0.133127,1.92108e-05,0.000140054,0.426452,0.196838,0.0826805,0.246601,0.193021,5.17319e-09,0.202165,0.0946865,0.120618,0.079499,0.0188178,0.195618,0.127688,0.201169,0.220353,0.24948,0.178639,0.291976,5.1962e-05,0.364334,0.15547,0.110256,0.00226167,0.14794,0.00059876,0.240761,0.225961,0.124417,6.78225e-05,0.000654201,0.182843,0.130771,1.07936e-08,0.135777,0.147842,0.0339286,0.217363,0.119015,0.00709584,0.21618,0.00293299,0.107021,5.9496e-10,0.0220967,0.392453,0.0164195,0.0780061,0.315336,0.230477,0.000372597,0.295555,0.154895,6.08835e-05,0.0478217,0.507599,0.170854,0.0575231,0.174063,0.514243,0.003653,0.54832,0.502211,0.296013,0.000111727,0.537932,0.459994,1.16628e-06,0.189126,0.25423,0.490559,0.45013,0.500698,0.472542,0.00670713,0.747471,0.0410736,5.02302e-12,0.000604252,0.00226518,0.0671621,0.184287,0.627201,6.23442e-19,2.12301e-07,0.290703,0.017476,1.1335e-10,0.478691,0.0744652,4.0328e-10,0.000126158,0.00893555,0.0768516,0.212703,0.0102049,0.364079,3.63382e-07,0.000282658,0.104625,0.569409,0.328518,8.95866e-10,0.00059285,6.27815e-15,0.0295909,8.42347e-11,1.10468e-10,0.209437,9.7042e-18,9.66019e-05,0.00249952,2.22375e-14,0.464001,9.21197e-12,0.0118057,9.26403e-13,1.00392e-08,1.76282e-07,0.261575,0.257956,0.264245,0.379063,0.326516,0.522925,0.113006,0.475063,0.202522,0.183837,9.54451e-06,0.126097,0.00179436,0.442469,0.212239,0.294954,0.156999,0.35974,0.00547498,0.00179415,0.234254,2.45187e-08,6.6744e-16,0.000364106,0.50338,0.0171443,0.00199725,0.000684584,0.00251166,0.0388817,0.139684,0.0181348,2.41149e-12,1.40388e-06,0.284496,0.512545,0.512178,0.0102074,5.18139e-08,4.08961e-07,0.00378836,0.552023,0.180735,6.46564e-08,0.216102,0.254659,0.109605,0.397869,0.00206351,0.226491,0.417131,0.0255104,0.627953,0.156131,0.00348879,0.639483,0.000608858,3.94701e-05,0.301581,0.261657,0.346776,0.466529,0.545655,0.0208637,0.349112,0.0485429,0.385425,0.307816,3.09113e-07,0.386339,0.382854,5.35254e-06,0.0285097,5.90805e-05,0.319747,0.475047,0.557967,0.0153563,0.000387312,4.62747e-10,0.0352827,0.246827,0.564333,5.8325e-06,0.387134,0.050476,0.358813,0.00554889,0.574252,0.493455,0.000975164,0.00360135,0.348802,0.476541,0.0574793,0.119749,0.42505,0.254628,9.56348e-09,0.479347,0.00230176,0.632833,0.378333,7.96957e-05,0.264038,0.22798,1.12616e-07,0.350933,0.263896,0.0446972,0.24452,0.329284,0.242783,0.0947248,0.000852417,0.210656,0.246234,0.211271,0.281295,0.267248,0.118257,0.125087,0.215123,0.321224,0.469461,0.325254,0.266651,0.00871319,0.231754,0.249415,0.283107,0.285648,0.427316,0.391071,0.0433305,0.25563,0.0316941,0.160955,0.256687,0.0432189,0.122439,0.16188,0.23235,0.290415,0.00106183,0.112422,0.170886,0.267687,0.315656,0.284866,0.0887542,0.267811,0.338547,0.147872,0.189388,0.293546,0.210125,0.292967,0.218414,0.0509944,0.0871471,0.0689852,0.0602698,0.341188,0.259328,0.437467,0.201057,0.15696,0.129351,0.141936,0.0786166,0.276997,0.205513,0.282389,0.00326229,0.162089,0.330223,0.387837,0.233244,0.207281,0.327401,0.195748,0.27845,0.161712,0.237871,0.239139,0.095257,0.000767461,0.332769,0.262022,0.274403,0.266687,0.184534,0.248707,0.31749,0.15156,0.287598,0.313858,0.223773,0.25788,0.181895,0.253768,0.30702,0.0221551,0.170837,0.000748107,0.28543,0.222656,0.028353,0.127111,0.037179,0.390754,0.355805,0.279739,0.108118,0.259901,0.139723,0.0708274,0.0710478,0.196248,0.102645,0.0539258,0.0709978,0.401939,0.332746,0.271338,0.242121,0.298673,0.244395,0.106889,0.128632,0.0845989,0.159153,0.0842401,0.13698,0.0874421,0.100355,0.167854,0.142846,0.0583767,0.088258,0.117657,0.0486914,0.175784,0.262778,0.373453,0.362662,0.433518,0.184359,0.334474,0.325785,0.257476,0.291176,0.376537,0.322827,0.229571,0.359036,0.335984,0.171704,0.208256,0.265058,0.256405,0.362898,0.302133,0.40806,0.151361,0.279606,0.286696,0.150674,0.251128,0.246177,0.35674,0.35852,0.318525,0.213257,0.287217,0.122782,0.410951,0.289049,0.266974,0.125746,0.112897,0.398354,0.222091,0.205977,0.34423,0.0936726,0.343425,0.132374,0.285122,0.22741,0.203996,0.276721,0.321965,0.264707,0.450113|tfbs_overrepresentation_for_novel_motifs=1.44014,0.298605,0.581696,0.741427,0.534346,0.739643,0.821651,0.395818,0.392841,0.151681,0.706765,0.867962,2.45508,0.809319,0.532789,0.559384,1.05593,0.471262,0.938585,0.223552,0.581762,0.505745,0.731221,0.528529,2.59358,0.892087,0.316693,0.728867,1.33003,0.806311,0.682839,1.09415,1.10579,0.344471,3.16804,2.05579,3.15145,1.75478,0.463978,0.371755,0.493145,0.66492,0.539378,0.53106,0.0946706,0.61613,0.822818,0.694903,0.173425,0.538016,0.90714,0.83543,0.25073,1.17354,1.33024,0.812467,0.54284,1.82985,0.806003,0.776148,1.13655,1.92893,0.393426,1.02706,0.844545,0.991076,1.42026,1.79268,2.45549,1.62905,0.650393,0.402607,1.28263,1.32819,0.336329,0.321165,0.305238,1.00941,1.08,0.62601,0.362435,1.02594,0.844168,0.399165,1.27559,3.02769,0.221873,1.44378,0.934646,1.89266,1.51507,1.24792,1.11156,0.441618,0.535192,0.456994,0.354969,1.15558,0.939507,8.03095,2.04634,1.1057,1.14983,1.05974,0.979006,0.701817,1.04326,0.805616,0.632569,0.516141,0.594299,1.14697,0.575476,0.717043,1.46636,0.489254,0.12452,1.63159,0.988625,0.444962,1.31973,0.932085,0.736652,0.856196,1.57854,1.0102,0.814847,1.11673,1.36323,0.458105,1.24863,0.68598,1.37788,0.852645,1.52813,0.283547,0.676268,0.729481,1.48509,2.34913,1.94535,1.44718,0.8167,1.15194,0.980848,0.768101,0.963351,2.1895,0.661255,0.437774,0.66252,1.00204,1.24902,2.65458,0.824835,1.65997,0.917558,1.28873,0.632914,1.4628,1.44595,1.23002,1.07918,1.47036,0.997702,0.843324,0.423521,0.820225,0.156682|tfbs_overrepresentation_jaspar=MA0003.1;0.0938548,MA0004.1;0.71247,MA0006.1;0.532262,MA0007.1;1.65296,MA0009.1;1.20602,MA0014.1;1.86845,MA0017.1;0.577281,MA0019.1;0.873355,MA0024.1;1.09684,MA0025.1;1.34373,MA0027.1;2.83281,MA0028.1;1.35734,MA0029.1;1.11704,MA0030.1;1.10506,MA0031.1;1.03735,MA0038.1;0.824639,MA0040.1;1.12314,MA0041.1;0.732902,MA0042.1;0.697662,MA0043.1;1.20635,MA0046.1;1.19471,MA0048.1;1.30988,MA0050.1;0.69864,MA0051.1;1.91805,MA0052.1;1.12718,MA0055.1;5.70469,MA0056.1;0,MA0057.1;2.77736,MA0058.1;0.605914,MA0059.1;0.604454,MA0060.1;0.393285,MA0061.1;0.360128,MA0063.1;0,MA0066.1;0.825101,MA0067.1;1.53181,MA0068.1;1.52107,MA0069.1;1.19071,MA0070.1;1.17908,MA0071.1;0.782546,MA0072.1;1.1744,MA0073.1;0.380957,MA0074.1;0.819248,MA0076.1;0.623864,MA0077.1;1.16637,MA0078.1;0.926725,MA0081.1;0.604638,MA0083.1;1.21381,MA0084.1;1.72172,MA0087.1;1.17185,MA0088.1;0.182167,MA0089.1;0,MA0090.1;0.640115,MA0091.1;0.715356,MA0092.1;1.6149,MA0093.1;0.535768,MA0095.1;0,MA0098.1;0,MA0100.1;0.83965,MA0101.1;0.539569,MA0103.1;1.29536,MA0105.1;4.42006,MA0106.1;0.869173,MA0107.1;1.1497,MA0108.2;1.03412,MA0109.1;0,MA0111.1;0.655276,MA0113.1;0.886811,MA0114.1;0.447443,MA0115.1;1.45393,MA0116.1;0.457606,MA0117.1;1.24497,MA0119.1;0.586221,MA0122.1;1.27173,MA0124.1;1.41151,MA0125.1;1.32534,MA0130.1;0,MA0131.1;0.94608,MA0132.1;0,MA0133.1;0,MA0135.1;1.23748,MA0136.1;0.832277,MA0139.1;0.344952,MA0140.1;0.779643,MA0141.1;0.602484,MA0142.1;1.00381,MA0143.1;0.887001,MA0144.1;0.430413,MA0145.1;1.08195,MA0146.1;0.061409,MA0147.1;0.46175,MA0148.1;0.739888,MA0149.1;0.769072,MA0062.2;0.931615,MA0035.2;0.778873,MA0039.2;9.51044,MA0138.2;0.928035,MA0002.2;0.379056,MA0137.2;0.558189,MA0104.2;0.392359,MA0047.2;0.856092,MA0112.2;0.551048,MA0065.2;0.577908,MA0150.1;0.633493,MA0151.1;0,MA0152.1;0.78681,MA0153.1;1.30799,MA0154.1;0.229241,MA0155.1;2.30186,MA0156.1;0.560797,MA0157.1;0.97481,MA0158.1;0,MA0159.1;0.462502,MA0160.1;0.756582,MA0161.1;0,MA0162.1;0.309472,MA0163.1;1.90765,MA0164.1;0.90014,MA0080.2;0.535868,MA0018.2;0.870662,MA0099.2;0.7872,MA0079.2;8.14977,MA0102.2;1.75932,MA0258.1;0.418966,MA0259.1;0.471671,MA0442.1;0}} | ||
| | |||
}} |
Latest revision as of 12:05, 17 September 2013
Full id: C2418_Renal_Urothelial_salivary_Corneal_Bronchial_Mammary_Keratinocyte
Phase1 CAGE Peaks
Hg19::chr17:48133330..48133349,+ | p2@ITGA3 |
Hg19::chr17:48133352..48133363,+ | p4@ITGA3 |
Hg19::chr17:48133424..48133443,+ | p3@ITGA3 |
Hg19::chr17:48133459..48133486,+ | p1@ITGA3 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.76e-39 | 253 |
embryonic cell | 4.47e-33 | 250 |
mesodermal cell | 3.69e-16 | 121 |
squamous epithelial cell | 1.71e-13 | 63 |
endo-epithelial cell | 2.10e-12 | 42 |
kidney cell | 2.83e-10 | 17 |
kidney epithelial cell | 2.83e-10 | 17 |
animal cell | 8.57e-10 | 679 |
eukaryotic cell | 8.57e-10 | 679 |
epithelial cell of nephron | 1.38e-09 | 15 |
endodermal cell | 2.49e-09 | 58 |
mesothelial cell | 4.98e-09 | 19 |
ecto-epithelial cell | 5.78e-08 | 34 |
respiratory epithelial cell | 5.91e-08 | 13 |
kidney tubule cell | 8.21e-08 | 10 |
nephron tubule epithelial cell | 8.21e-08 | 10 |
kidney cortical cell | 9.49e-08 | 12 |
renal cortical epithelial cell | 9.49e-08 | 12 |
lining cell | 1.03e-07 | 58 |
barrier cell | 1.03e-07 | 58 |
contractile cell | 1.22e-07 | 59 |
non-terminally differentiated cell | 1.41e-07 | 106 |
columnar/cuboidal epithelial cell | 2.34e-07 | 27 |
muscle precursor cell | 4.30e-07 | 58 |
myoblast | 4.30e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.30e-07 | 58 |
ectodermal cell | 5.70e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 8.92e-08 | 29 |
female reproductive organ cancer | 9.15e-08 | 27 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 0.0938548 |
MA0004.1 | 0.71247 |
MA0006.1 | 0.532262 |
MA0007.1 | 1.65296 |
MA0009.1 | 1.20602 |
MA0014.1 | 1.86845 |
MA0017.1 | 0.577281 |
MA0019.1 | 0.873355 |
MA0024.1 | 1.09684 |
MA0025.1 | 1.34373 |
MA0027.1 | 2.83281 |
MA0028.1 | 1.35734 |
MA0029.1 | 1.11704 |
MA0030.1 | 1.10506 |
MA0031.1 | 1.03735 |
MA0038.1 | 0.824639 |
MA0040.1 | 1.12314 |
MA0041.1 | 0.732902 |
MA0042.1 | 0.697662 |
MA0043.1 | 1.20635 |
MA0046.1 | 1.19471 |
MA0048.1 | 1.30988 |
MA0050.1 | 0.69864 |
MA0051.1 | 1.91805 |
MA0052.1 | 1.12718 |
MA0055.1 | 5.70469 |
MA0056.1 | 0 |
MA0057.1 | 2.77736 |
MA0058.1 | 0.605914 |
MA0059.1 | 0.604454 |
MA0060.1 | 0.393285 |
MA0061.1 | 0.360128 |
MA0063.1 | 0 |
MA0066.1 | 0.825101 |
MA0067.1 | 1.53181 |
MA0068.1 | 1.52107 |
MA0069.1 | 1.19071 |
MA0070.1 | 1.17908 |
MA0071.1 | 0.782546 |
MA0072.1 | 1.1744 |
MA0073.1 | 0.380957 |
MA0074.1 | 0.819248 |
MA0076.1 | 0.623864 |
MA0077.1 | 1.16637 |
MA0078.1 | 0.926725 |
MA0081.1 | 0.604638 |
MA0083.1 | 1.21381 |
MA0084.1 | 1.72172 |
MA0087.1 | 1.17185 |
MA0088.1 | 0.182167 |
MA0089.1 | 0 |
MA0090.1 | 0.640115 |
MA0091.1 | 0.715356 |
MA0092.1 | 1.6149 |
MA0093.1 | 0.535768 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.83965 |
MA0101.1 | 0.539569 |
MA0103.1 | 1.29536 |
MA0105.1 | 4.42006 |
MA0106.1 | 0.869173 |
MA0107.1 | 1.1497 |
MA0108.2 | 1.03412 |
MA0109.1 | 0 |
MA0111.1 | 0.655276 |
MA0113.1 | 0.886811 |
MA0114.1 | 0.447443 |
MA0115.1 | 1.45393 |
MA0116.1 | 0.457606 |
MA0117.1 | 1.24497 |
MA0119.1 | 0.586221 |
MA0122.1 | 1.27173 |
MA0124.1 | 1.41151 |
MA0125.1 | 1.32534 |
MA0130.1 | 0 |
MA0131.1 | 0.94608 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.23748 |
MA0136.1 | 0.832277 |
MA0139.1 | 0.344952 |
MA0140.1 | 0.779643 |
MA0141.1 | 0.602484 |
MA0142.1 | 1.00381 |
MA0143.1 | 0.887001 |
MA0144.1 | 0.430413 |
MA0145.1 | 1.08195 |
MA0146.1 | 0.061409 |
MA0147.1 | 0.46175 |
MA0148.1 | 0.739888 |
MA0149.1 | 0.769072 |
MA0062.2 | 0.931615 |
MA0035.2 | 0.778873 |
MA0039.2 | 9.51044 |
MA0138.2 | 0.928035 |
MA0002.2 | 0.379056 |
MA0137.2 | 0.558189 |
MA0104.2 | 0.392359 |
MA0047.2 | 0.856092 |
MA0112.2 | 0.551048 |
MA0065.2 | 0.577908 |
MA0150.1 | 0.633493 |
MA0151.1 | 0 |
MA0152.1 | 0.78681 |
MA0153.1 | 1.30799 |
MA0154.1 | 0.229241 |
MA0155.1 | 2.30186 |
MA0156.1 | 0.560797 |
MA0157.1 | 0.97481 |
MA0158.1 | 0 |
MA0159.1 | 0.462502 |
MA0160.1 | 0.756582 |
MA0161.1 | 0 |
MA0162.1 | 0.309472 |
MA0163.1 | 1.90765 |
MA0164.1 | 0.90014 |
MA0080.2 | 0.535868 |
MA0018.2 | 0.870662 |
MA0099.2 | 0.7872 |
MA0079.2 | 8.14977 |
MA0102.2 | 1.75932 |
MA0258.1 | 0.418966 |
MA0259.1 | 0.471671 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
CTCF#10664 | 4 | 5.36025637307503 | 0.00121114538164362 | 0.00816965785141628 |
CTCFL#140690 | 4 | 19.7464743589744 | 6.5732084880439e-06 | 0.000192836888000791 |
EP300#2033 | 4 | 6.7739417262232 | 0.000474845982144264 | 0.0043399351998919 |
STAT3#6774 | 4 | 10.5194649971542 | 8.16377768286615e-05 | 0.00123086008000701 |
TAF1#6872 | 4 | 3.34304628574529 | 0.00800566489870165 | 0.0321999397810792 |
TCF7L2#6934 | 4 | 10.7701765631373 | 7.42969445082454e-05 | 0.00115365723870006 |
YY1#7528 | 4 | 4.91117074985386 | 0.0017187183805544 | 0.0106788761346137 |
ZBTB7A#51341 | 4 | 7.3519093078759 | 0.00034222354001599 | 0.00346365774742998 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.