Personal tools

MCL coexpression mm9:2594: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=0.273906306945184,-0.132547493938963,-0.230243698674473,-0.166783584671338,-0.136914867310073,0.0357584279734428,-0.13554938079873,0.0795331259321362,-0.136175404363356,0.0445438226307137,-0.222689752938438,-0.26197119124185,-0.217940920976348,-0.270829953046319,-0.271610001628416,-0.305633596039682,-0.354853940691718,-0.2939585890243,-0.354853940691718,-0.26589225044793,0.424366004823385,-0.287199379096289,-0.233900905892118,-0.211630059504504,-0.105389728490064,-0.223474789814566,-0.188575432944359,-0.126595880122936,-0.264362408954963,-0.263227268491453,-0.227897522511615,-0.200467309538548,-0.238743908293585,-0.354853940691718,-0.132698955324155,-0.16859521667483,-0.268428000871357,-0.156733352835268,-0.218623006820989,-0.218177393056664,-0.179712619913527,-0.27948865632118,-0.198637680172972,-0.111308350910795,-0.127644720247649,-0.170645211591777,-0.271186252532673,-0.19573991460683,-0.302129553889912,-0.106732781250961,-0.232628141805093,-0.354853940691718,-0.0845277011848303,0.0211684027737715,-0.123948534952307,-0.288570671498216,-0.318380247692616,-0.131855932902195,0.317470928078963,0.348376938504604,0.145049967654714,-0.312610557611169,-0.354853940691718,-0.354853940691718,-0.354853940691718,-0.354853940691718,-0.224090927863292,-0.0700741905806093,0.0317566391395863,-0.0220508932814325,-0.0599432775041689,0.379709518949367,0.32202497471954,0.0761255073523693,0.0697228800639407,-0.012188471314014,0.251666057106211,0.215057063537006,0.149403274957251,0.321679832906355,0.43790336507891,0.309540489462073,0.174727984557875,0.347674770781254,0.38663405254376,0.435780654584094,0.585919050468998,0.417681204499611,-0.13392320184357,-0.113676130076245,-0.112124358826656,-0.175112670904402,-0.230553456584102,-0.354853940691718,-0.209903879800876,-0.262237057274572,0.0594272611047291,-0.33207208581869,-0.2714328278156,-0.354853940691718,0.306269617103092,-0.235335181863568,-0.354853940691718,-0.354853940691718,-0.302773687350951,-0.240317909942618,-0.295624670194391,-0.0271105619577053,-0.016137634889056,0.0163141303876742,0.00915067324553637,0.0127276673837257,0.0201242193385321,0.00561925524498114,0.105834396873323,-0.156618421040946,-0.238364969976762,-0.064982359992019,-0.263113401222615,-0.147383443388434,-0.11457137349343,-0.199486877307881,-0.202533767278862,0.0567711776364495,-0.000822596115403612,0.020163996465437,-0.178904244636787,-0.354853940691718,-0.262577803792984,0.483540914278704,1.65827867497047,0.71934078800211,0.732049455348106,0.771498124028273,0.809800249273979,1.20317692648657,0.115082860426349,0.404609553533708,0.80134147822877,1.12803154727202,0.20467311049202,0.0746832096109097,0.190933760209978,0.369276217829026,0.577476367068622,0.598910707347639,0.56412455981819,1.55134203311937,0.277471423334803,0.416050859939093,0.30471544791162,0.137430642994221,0.297395539641996,0.117456195158631,0.164697904202548,-0.0365807232674533,-0.227850112963579,-0.354853940691718,-0.208735766950319,-0.167965322007862,-0.0509405755970468,-0.12825422906549,-0.149954969557829,-0.121368391972506,-0.119719132368637,-0.182657947992681,-0.172789733439298,-0.239907541052444,-0.0952084520757701,-0.136758584882091,-0.10784321596265,-0.188424812271188,-0.244690492039428,-0.152646948982856,0.199343553286198,0.22713479487437,-0.255144882850921,-0.0346616136610066,0.193036581275308,0.180484963161008,0.22163039857084,0.232542388140189,0.26631382397104,0.227161179660306,0.238789702259846,0.290170909540117,0.325007846307183,0.286191195286332,0.289524281423875,0.204109127039714,0.0564860763843667,0.0829003049517677,-0.0882911342700529,0.0626198370814533,0.137623663411007,-0.0516532906631016,0.0710395721520648,0.0136488076345457,-0.0115883233154993,0.165985210847301,0.0946738519070052,0.0809204191021867,-0.279682839294321,-0.251429727547959,-0.302897863411025,-0.247330343363344,-0.242107541740673,-0.292298090650588,-0.272697796012997,-0.318249476360128,-0.292442822301503,-0.232750470301782,-0.225861586654922,-0.165780902891172,-0.140132430601887,-0.207999283315111,-0.262695865071554,-0.200082025626866,0.422731720476925,0.00292536022534983,-0.00971637910767757,0.0126693570376287,0.0537530684745397,0.031780952390871,0.0290436615063837,0.0994516924051475,0.375535205066162,0.23758130191837,0.225654040675573,0.473606827671002,0.338095961744572,0.343588278089702,-0.354853940691718,-0.354853940691718,0.0008803303525464,-0.144956821802256,0.319919104211652,0.331956948488158,-0.201661727549673,-0.103418618991553,0.180916395988143,0.0940757078336743,0.326116708682798,-0.0433331279785067,0.165445860031832,-0.0345852440317836,0.042814152716674,0.172370664919308,0.181972026634968,0.383005514938726,0.0272922470787731,-0.039633428634667,0.0877087819920877,0.452040808113569,-0.232560401339558,0.032560374046726,-0.0319035642055735,-0.00369273016870013,0.0121283182943127,0.0775068441003977,0.0358858848995425,0.0407597568754117,-0.0101983897339185,0.0844000931320687,-0.250640679640696,-0.354853940691718,1.02382667904927,0.22655486649898,0.199333027362537,0.435720994966728,0.628423890321755,0.586619938601238,0.723772932179643,0.822025118349203,-0.0747572543739043,-0.0804161406445748,0.245953299589595,-0.0502404116986508,-0.085430683860449,-0.000410028771154669,-0.0527883627610749,-0.0833001128185589,0.245434836156375,0.322318916329471,-0.0948110048056812,-0.19789298331427,-0.130393879237306,-0.200174514222583,-0.181322519322478,-0.206247378212562,0.106677642037422,0.0743865761656706,0.0903553135519008,-0.159174457332565,0.0169075145828819,0.108384193288572,0.0252402537363082,0.00615418804062233,0.111245975335798,0.118312837529841,0.170001915987557,-0.0205562375017716,0.125610111284563,-0.0156483769420246,-0.290136782363405,-0.0835652084078967,-0.147322638014591,0.0945714477504736,-0.0941675814297625,-0.211210414106084,-0.116185472958436,-0.114320813494897,-0.149201008936843,-0.177542023550657,-0.223138773797392,-0.157052582782613,0.227984134990586,0.243015085053593,0.0897355669942133,0.00384031646736473,-0.0415039841607023,-0.153062272125446,-0.103254353652115,-0.20050080239849,-0.156904593007467,-0.0826709711212632,-0.147035400140263,-0.139337045546437,-0.09719022259209,-0.171360409490126,-0.296809798187303,-0.230511577111949,-0.295804650577134,0.0957758289801205,0.271519979378018,0.134221653419691,-0.0428920139744996,0.123151439770098,0.310106455550951,0.291232557941329,0.365785664851431,0.260864433291771,0.408242787384452,0.197399741733335,0.161819516634137,0.185964576717993,0.472225350491291,0.197050547556659,0.0551308714497416,0.162700946513137,0.172674353613301,0.0539413580450916,0.0915203608641868,0.0872267011983314,0.173286437488242,0.176724771269106,0.168777627495953,0.119826595940541,0.177844609992895,0.137746939852282,0.157525556458612,0.17859267673022,0.149598799366546,0.0823963183435978,0.164963786751319,0.119379702934752,0.109992423040523,0.157794977944606,0.161247907225142,0.178792934186385,0.0829190954864302,0.166200908417795,0.198674691296437,0.216987077557218,0.189028172934432,0.164292843004116,0.151095841173428,0.189318432403107,0.174020591443962,0.145667537582829,0.243857597932414,0.169080865530436,0.131773586561799,0.105378961808481,0.240995641090648,0.107396277232926,0.0237583268944177,0.0836485047700577,-0.0900663643967735|coexpression_dpi_cluster_scores_median=0.266074885746407,-0.179820238452656,-0.309824270834808,-0.266248904349985,-0.309824270834808,0.0542162617068089,-0.143059917866607,0.0746319571913844,-0.273269847834214,-0.0788153229028168,-0.253121133558571,-0.309824270834808,-0.241192936453657,-0.309824270834808,-0.24885693956415,-0.309824270834808,-0.373722848159102,-0.309824270834808,-0.373722848159102,-0.309824270834808,0.515980084762712,-0.309824270834808,-0.309824270834808,-0.166178881300423,-0.0982482743016992,-0.183945976765515,-0.309824270834808,-0.164475732345277,-0.234268762517411,-0.283399922904091,-0.21431778731214,-0.309824270834808,-0.309824270834808,-0.373722848159102,-0.199621349162167,-0.243038331962332,-0.309824270834808,-0.309824270834808,-0.309824270834808,-0.309824270834808,-0.309824270834808,-0.309824270834808,-0.309824270834808,-0.168964578667912,-0.194503121068016,-0.309824270834808,-0.309824270834808,-0.223845047177992,-0.309824270834808,-0.0787830153662569,-0.26652209269207,-0.373722848159102,-0.116453512918132,0.00827975110719531,-0.255177754657274,-0.27429794436885,-0.373722848159102,-0.12921901671426,0.321960876938179,0.337647041899498,0.0816070052529236,-0.309824270834808,-0.373722848159102,-0.373722848159102,-0.373722848159102,-0.373722848159102,-0.196014531229321,-0.133425205874946,0.0437091542688929,0.0143231058668548,-0.0446997541387395,0.498079606833711,0.324958018248856,0.0374877852336264,0.00283963362299194,0.0793564989123899,0.131741556803013,0.192294182552253,0.157773176093491,0.295845366848809,0.456462871832313,0.286101292830148,0.160627529521563,0.440343296492619,0.359228227756575,0.457366590066764,0.643104400434325,0.371800665053545,-0.155308600672785,-0.196606956141495,-0.309824270834808,-0.104110943478128,-0.309824270834808,-0.373722848159102,-0.163589611744981,-0.373722848159102,0,-0.309824270834808,-0.309824270834808,-0.373722848159102,0.313030004446025,-0.309824270834808,-0.373722848159102,-0.373722848159102,-0.309824270834808,-0.282938919276862,-0.309824270834808,-0.00622850791708257,-0.124080965999031,0.0858155348919365,0,0.141469716371772,0.00352746996347286,-0.0301604321547366,0.149782192089753,-0.169271490212163,-0.309824270834808,-0.153336279147299,-0.309824270834808,-0.188089267024391,-0.222144914575332,-0.138134301458135,-0.373722848159102,0.0106090768835214,-0.0980791473070548,0.135499556461746,-0.139779610771459,-0.373722848159102,-0.211478093953495,0.605213020422318,1.86051366941928,0.751419028435331,0.802357486930992,0.889532929668536,0.931105580064014,1.42592361493886,0.126540234137132,0.541185759280882,1.14956072871376,1.25323743068072,0.262178955003944,0.137370382821572,0.21402720549933,0.498074103055528,0.864743777745717,0.883438503398654,0.837064345757485,1.7646631573903,0.252978756773167,0.322740806235931,0.310011760609381,0.130071197504154,0.403725804188239,0.108875323768223,0.207923334382708,-0.126675227493088,-0.309824270834808,-0.373722848159102,-0.272394381556493,-0.171130609956439,-0.0367370161647466,-0.23791942264623,-0.0843615937498197,-0.108347206747101,-0.215829353976548,-0.219025381981047,-0.124580759007737,-0.207274566719268,-0.0490854297200976,-0.0495531246063674,-0.137684817579016,-0.250563871477611,-0.287523196566209,-0.194390095608334,0.352671082780803,0.3100999808221,-0.309824270834808,-0.0676110618223058,0.214723828507507,0.211623296797817,0.257529859937882,0.316201441873754,0.389271397660402,0.264806429919279,0.254640257804432,0.469867991279119,0.496052151441654,0.541263749844372,0.442065386540215,0.186771099475446,0.19005249914626,0.173938976470258,-0.0510054978786874,0.0777529022664378,0.0179590136097269,0.0369017953719312,0.0253757695548123,-0.0264367192161519,-0.0259981276392587,0.126051737674557,0.10199935520539,0.0620515116348027,-0.268258050985148,-0.242811061916672,-0.295788732238063,-0.219729307088682,-0.229609143944792,-0.287180928019549,-0.309824270834808,-0.309824270834808,-0.308466182389434,-0.204463504575128,-0.309824270834808,-0.0682075977519433,-0.191877965527732,-0.275917764175865,-0.240568963324814,-0.138846114381964,0.629185978285325,-0.0143228686844051,-0.0504477694917788,-0.00480186111514774,0.0410548105703905,-0.0117895549244895,0.0115726677879503,0.130486903584098,0.482629639883075,0.353728639995663,0.381186779342273,0.566685548050766,0.421980178254794,0.369398790341669,-0.373722848159102,-0.373722848159102,-0.012385815811578,-0.119083597279855,0.383648350905956,0.309761072362871,-0.309824270834808,-0.21205661717477,0.274458768459533,0.14307392392751,0.378383795158819,-0.138976230190537,0.22809368294535,0.00197124001123544,0.108351489034486,0.272879628556325,0.266173014790143,0.376441510306883,0.0274526876984587,0.0058089190982627,0.0821657430691026,0.569280322749627,-0.309824270834808,0.122098241392921,-0.036761145187894,-0.0154826248830631,-0.0343043026188187,0.229186701941961,0.0329143579823674,0.128868450108911,-0.0578590679010084,0.16655007089198,-0.309824270834808,-0.373722848159102,1.22626782958996,0.227622414222119,0.195203222469318,0.42233490972547,0.676484780670554,0.505051221997769,0.776155685135715,0.946653829268628,-0.142700959524619,-0.0673245350526894,0.386489399832343,-0.011120163850476,-0.0868160670662863,-0.0183534391966015,0.00705799431511117,-0.0759961633602427,0.372085030947407,0.327430779815935,-0.0836154006732592,-0.292236247088765,-0.140271286340913,-0.186471121256628,-0.191587022451399,-0.217389350310051,0.101821901053276,0.0442001974113728,0.113839656565574,-0.309824270834808,-0.02588054758937,0.108177436185384,0.0445917224773009,0.04323170467152,0.150718099975682,0.1539701391965,0.209255303908465,0.0290089285872372,0.124603863055723,-0.0229558041254151,-0.309824270834808,-0.138576958762219,-0.185673304657904,0.0656194308546418,-0.0940288153024939,-0.202939384322194,-0.142675677621443,-0.0920714304584841,-0.266517277725815,-0.215848121271325,-0.183441952739755,-0.190564711642702,0.225811906040384,0.362051250699219,0.140254092571987,-0.0282174913387402,-0.0328648380213389,-0.145190254808682,-0.150537299499073,-0.196234758244128,-0.154192872140856,-0.0709025096113146,-0.137428787047019,-0.233393677664117,-0.143243909181412,-0.221075148837069,-0.293948489324621,-0.309824270834808,-0.309824270834808,0.0959516886760703,0.260289281196302,0.0108397451497176,-0.104800217812466,0.0970159403453207,0.368060008168705,0.208903629087668,0.373157545218969,0.248925762980065,0.389373879917068,0.133025637059654,0.258388017132371,0.202273647578552,0.484917594079702,0.232463667323066,0.0678756652848843,0.166590589540834,0.17055776895351,0.0356540670660742,0.0823963041035528,0.0720642632040713,0.227328900009392,0.145677707374413,0.171331465477684,0.205290868838581,0.167349283066757,0.178005278692482,0.148485679083378,0.16267856261964,0.160410635660899,0.0821575600649387,0.147112499911127,0.18727259045805,0.112059531961277,0.234539197042735,0.157766896309698,0.241672174992996,0.0758922852042035,0.128731072906639,0.201421562340486,0.206657479000664,0.141851617108976,0.217499763952923,0.131942086401446,0.13014232294725,0.204134625498046,0.119646882897131,0.22867233102993,0.146426658128499,0.187268303180534,0.087918257050045,0.142642826256795,0.0888269427022196,0.0538087935043944,0.124937190860412,-0.0960267733723028|gostat_on_MCL_coexpression=GO:0030695;GTPase regulator activity;0.00796099684375163;237422,19739!|ontology_enrichment_celltype=CL:0000540!4.37e-07!33;CL:0000047!4.37e-07!33;CL:0000031!4.37e-07!33;CL:0000404!4.37e-07!33|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0002346!5.51e-19!64;UBERON:0003075!5.51e-19!64;UBERON:0007284!5.51e-19!64;UBERON:0010371!6.99e-18!73;UBERON:0003056!2.36e-16!49;UBERON:0004121!8.41e-16!95;UBERON:0000924!8.41e-16!95;UBERON:0006601!8.41e-16!95;UBERON:0001017!1.30e-14!73;UBERON:0001016!9.03e-14!75;UBERON:0000073!1.36e-13!54;UBERON:0001049!1.46e-13!52;UBERON:0005068!1.46e-13!52;UBERON:0006241!1.46e-13!52;UBERON:0007135!1.46e-13!52;UBERON:0003080!5.49e-12!40;UBERON:0002780!1.98e-11!39;UBERON:0001890!1.98e-11!39;UBERON:0006240!1.98e-11!39;UBERON:0000955!3.18e-11!47;UBERON:0006238!3.18e-11!47;UBERON:0010314!3.79e-11!92;UBERON:0002616!8.50e-11!46;UBERON:0002020!7.72e-09!34|tfbs_overrepresentation_for_novel_motifs=0.752782,1.07244,1.71649,0.801166,0.587814,0.81763,0.919454,0.467321,0.479531,0.66329,0.870507,0.906098,2.05331,0.933025,0.608226,0,1.14208,0.578045,0.448066,0.328717,0.679146,0.756749,0.932027,0.585919,0.731217,0.963352,0.437236,0.841386,0.64294,0.380786,0.825437,1.24901,0.575271,0.411696,0.608816,0.144706,1.38481,0.902078,1.32715,0.50014,0.582863,0.831295,0.261619,0.610669,0.474221,0.788421,1.05665,0.859154,0.663409,0.646474,1.12346,0.99279,1.72673,1.3966,1.41464,0.940919,0.657156,0.891887,1.08907,0.938668,1.22795,1.00308,0.494668,1.11142,0.953187,1.15459,1.55483,1.90983,1.22303,1.7608,0.700291,0.474956,3.02035,1.44925,2.81128,0.402065,0.411601,1.04436,1.20986,0.684144,0.476502,1.16055,1.00151,0.459035,1.32978,0.181575,0.568545,0.99201,1.06194,2.07346,1.62608,1.33496,1.26245,0.595071,0.531443,0.509215,0.464141,1.26539,1.05692,0.352122,0.563856,1.24872,1.37854,1.12409,1.12297,0.830796,1.18646,0.854628,0.689894,0.681267,0.744607,1.38039,0.685481,0.876299,1.63327,0.580657,4.21798,0.805461,1.14346,1.37508,1.45481,1.08896,0.965352,1.04338,1.68841,1.21376,0.928483,1.25534,1.55328,0.598722,1.36093,0.792832,1.52297,0.955954,1.65529,0.751419,0.762499,0.832891,1.60513,2.44352,2.04137,3.41631,0.978551,1.26,1.11604,0.831808,1.06002,2.40374,0.765221,0.589976,0.999018,0.260379,1.39822,1.28513,0.954936,1.48249,0.993889,0.622823,0.749933,0.762177,1.61484,1.32889,1.21423,0.741984,1.11251,0.94678,1.38188,0.904334,0.421338|tfbs_overrepresentation_jaspar=MA0003.1;1.35193,MA0004.1;0.801718,MA0006.1;0.60285,MA0007.1;0.784593,MA0009.1;1.27673,MA0014.1;0.416365,MA0017.1;0.635031,MA0019.1;1.08369,MA0024.1;1.23079,MA0025.1;1.51835,MA0027.1;2.9431,MA0028.1;1.49373,MA0029.1;1.20789,MA0030.1;1.21482,MA0031.1;1.17722,MA0038.1;0.963265,MA0040.1;1.28983,MA0041.1;0.714279,MA0042.1;0.69885,MA0043.1;1.3775,MA0046.1;1.31428,MA0048.1;1.66457,MA0050.1;0.845669,MA0051.1;0.973068,MA0052.1;1.29825,MA0055.1;1.06076,MA0056.1;0,MA0057.1;0.337566,MA0058.1;0.690848,MA0059.1;0.705317,MA0060.1;1.25521,MA0061.1;3.37324,MA0063.1;0,MA0066.1;0.951196,MA0067.1;1.63197,MA0068.1;0.343188,MA0069.1;1.29861,MA0070.1;1.28847,MA0071.1;0.844726,MA0072.1;1.2796,MA0073.1;0.121346,MA0074.1;0.911576,MA0076.1;0.657929,MA0077.1;1.2569,MA0078.1;1.0091,MA0081.1;0.732313,MA0083.1;1.37668,MA0084.1;1.96428,MA0087.1;1.33189,MA0088.1;0.27999,MA0089.1;0,MA0090.1;0.762482,MA0091.1;0.816659,MA0092.1;0.762845,MA0093.1;0.62555,MA0095.1;0,MA0098.1;0,MA0100.1;0.89873,MA0101.1;1.70277,MA0103.1;1.56167,MA0105.1;3.76751,MA0106.1;1.01755,MA0107.1;2.61846,MA0108.2;1.10817,MA0109.1;0,MA0111.1;0.778753,MA0113.1;0.986839,MA0114.1;0.537669,MA0115.1;1.38041,MA0116.1;0.602598,MA0117.1;1.34691,MA0119.1;0.716476,MA0122.1;1.36752,MA0124.1;1.57762,MA0125.1;1.5017,MA0130.1;0,MA0131.1;1.07881,MA0132.1;0,MA0133.1;0,MA0135.1;1.4152,MA0136.1;0.933582,MA0139.1;1.16863,MA0140.1;0.898603,MA0141.1;0.671467,MA0142.1;1.16183,MA0143.1;1.00467,MA0144.1;0.541532,MA0145.1;0.794492,MA0146.1;0.900029,MA0147.1;0.556853,MA0148.1;0.820161,MA0149.1;8.52387,MA0062.2;0.412742,MA0035.2;0.903829,MA0039.2;0.0481552,MA0138.2;1.07027,MA0002.2;0.466067,MA0137.2;0.668025,MA0104.2;0.48458,MA0047.2;0.962424,MA0112.2;0.29236,MA0065.2;0.79573,MA0150.1;0.784464,MA0151.1;0,MA0152.1;0.962542,MA0153.1;1.43238,MA0154.1;0.35067,MA0155.1;0.312898,MA0156.1;0.656895,MA0157.1;1.12772,MA0158.1;0,MA0159.1;0.569393,MA0160.1;0.823568,MA0161.1;0,MA0162.1;0.499274,MA0163.1;0.927936,MA0164.1;0.933981,MA0080.2;0.64167,MA0018.2;0.944669,MA0099.2;1.06348,MA0079.2;0.166764,MA0102.2;2.01714,MA0258.1;0.520639,MA0259.1;0.543506,MA0442.1;0}}
|coexpression_dpi_cluster_scores_mean=0.273906306945184,-0.132547493938963,-0.230243698674473,-0.166783584671338,-0.136914867310073,0.0357584279734428,-0.13554938079873,0.0795331259321362,-0.136175404363356,0.0445438226307137,-0.222689752938438,-0.26197119124185,-0.217940920976348,-0.270829953046319,-0.271610001628416,-0.305633596039682,-0.354853940691718,-0.2939585890243,-0.354853940691718,-0.26589225044793,0.424366004823385,-0.287199379096289,-0.233900905892118,-0.211630059504504,-0.105389728490064,-0.223474789814566,-0.188575432944359,-0.126595880122936,-0.264362408954963,-0.263227268491453,-0.227897522511615,-0.200467309538548,-0.238743908293585,-0.354853940691718,-0.132698955324155,-0.16859521667483,-0.268428000871357,-0.156733352835268,-0.218623006820989,-0.218177393056664,-0.179712619913527,-0.27948865632118,-0.198637680172972,-0.111308350910795,-0.127644720247649,-0.170645211591777,-0.271186252532673,-0.19573991460683,-0.302129553889912,-0.106732781250961,-0.232628141805093,-0.354853940691718,-0.0845277011848303,0.0211684027737715,-0.123948534952307,-0.288570671498216,-0.318380247692616,-0.131855932902195,0.317470928078963,0.348376938504604,0.145049967654714,-0.312610557611169,-0.354853940691718,-0.354853940691718,-0.354853940691718,-0.354853940691718,-0.224090927863292,-0.0700741905806093,0.0317566391395863,-0.0220508932814325,-0.0599432775041689,0.379709518949367,0.32202497471954,0.0761255073523693,0.0697228800639407,-0.012188471314014,0.251666057106211,0.215057063537006,0.149403274957251,0.321679832906355,0.43790336507891,0.309540489462073,0.174727984557875,0.347674770781254,0.38663405254376,0.435780654584094,0.585919050468998,0.417681204499611,-0.13392320184357,-0.113676130076245,-0.112124358826656,-0.175112670904402,-0.230553456584102,-0.354853940691718,-0.209903879800876,-0.262237057274572,0.0594272611047291,-0.33207208581869,-0.2714328278156,-0.354853940691718,0.306269617103092,-0.235335181863568,-0.354853940691718,-0.354853940691718,-0.302773687350951,-0.240317909942618,-0.295624670194391,-0.0271105619577053,-0.016137634889056,0.0163141303876742,0.00915067324553637,0.0127276673837257,0.0201242193385321,0.00561925524498114,0.105834396873323,-0.156618421040946,-0.238364969976762,-0.064982359992019,-0.263113401222615,-0.147383443388434,-0.11457137349343,-0.199486877307881,-0.202533767278862,0.0567711776364495,-0.000822596115403612,0.020163996465437,-0.178904244636787,-0.354853940691718,-0.262577803792984,0.483540914278704,1.65827867497047,0.71934078800211,0.732049455348106,0.771498124028273,0.809800249273979,1.20317692648657,0.115082860426349,0.404609553533708,0.80134147822877,1.12803154727202,0.20467311049202,0.0746832096109097,0.190933760209978,0.369276217829026,0.577476367068622,0.598910707347639,0.56412455981819,1.55134203311937,0.277471423334803,0.416050859939093,0.30471544791162,0.137430642994221,0.297395539641996,0.117456195158631,0.164697904202548,-0.0365807232674533,-0.227850112963579,-0.354853940691718,-0.208735766950319,-0.167965322007862,-0.0509405755970468,-0.12825422906549,-0.149954969557829,-0.121368391972506,-0.119719132368637,-0.182657947992681,-0.172789733439298,-0.239907541052444,-0.0952084520757701,-0.136758584882091,-0.10784321596265,-0.188424812271188,-0.244690492039428,-0.152646948982856,0.199343553286198,0.22713479487437,-0.255144882850921,-0.0346616136610066,0.193036581275308,0.180484963161008,0.22163039857084,0.232542388140189,0.26631382397104,0.227161179660306,0.238789702259846,0.290170909540117,0.325007846307183,0.286191195286332,0.289524281423875,0.204109127039714,0.0564860763843667,0.0829003049517677,-0.0882911342700529,0.0626198370814533,0.137623663411007,-0.0516532906631016,0.0710395721520648,0.0136488076345457,-0.0115883233154993,0.165985210847301,0.0946738519070052,0.0809204191021867,-0.279682839294321,-0.251429727547959,-0.302897863411025,-0.247330343363344,-0.242107541740673,-0.292298090650588,-0.272697796012997,-0.318249476360128,-0.292442822301503,-0.232750470301782,-0.225861586654922,-0.165780902891172,-0.140132430601887,-0.207999283315111,-0.262695865071554,-0.200082025626866,0.422731720476925,0.00292536022534983,-0.00971637910767757,0.0126693570376287,0.0537530684745397,0.031780952390871,0.0290436615063837,0.0994516924051475,0.375535205066162,0.23758130191837,0.225654040675573,0.473606827671002,0.338095961744572,0.343588278089702,-0.354853940691718,-0.354853940691718,0.0008803303525464,-0.144956821802256,0.319919104211652,0.331956948488158,-0.201661727549673,-0.103418618991553,0.180916395988143,0.0940757078336743,0.326116708682798,-0.0433331279785067,0.165445860031832,-0.0345852440317836,0.042814152716674,0.172370664919308,0.181972026634968,0.383005514938726,0.0272922470787731,-0.039633428634667,0.0877087819920877,0.452040808113569,-0.232560401339558,0.032560374046726,-0.0319035642055735,-0.00369273016870013,0.0121283182943127,0.0775068441003977,0.0358858848995425,0.0407597568754117,-0.0101983897339185,0.0844000931320687,-0.250640679640696,-0.354853940691718,1.02382667904927,0.22655486649898,0.199333027362537,0.435720994966728,0.628423890321755,0.586619938601238,0.723772932179643,0.822025118349203,-0.0747572543739043,-0.0804161406445748,0.245953299589595,-0.0502404116986508,-0.085430683860449,-0.000410028771154669,-0.0527883627610749,-0.0833001128185589,0.245434836156375,0.322318916329471,-0.0948110048056812,-0.19789298331427,-0.130393879237306,-0.200174514222583,-0.181322519322478,-0.206247378212562,0.106677642037422,0.0743865761656706,0.0903553135519008,-0.159174457332565,0.0169075145828819,0.108384193288572,0.0252402537363082,0.00615418804062233,0.111245975335798,0.118312837529841,0.170001915987557,-0.0205562375017716,0.125610111284563,-0.0156483769420246,-0.290136782363405,-0.0835652084078967,-0.147322638014591,0.0945714477504736,-0.0941675814297625,-0.211210414106084,-0.116185472958436,-0.114320813494897,-0.149201008936843,-0.177542023550657,-0.223138773797392,-0.157052582782613,0.227984134990586,0.243015085053593,0.0897355669942133,0.00384031646736473,-0.0415039841607023,-0.153062272125446,-0.103254353652115,-0.20050080239849,-0.156904593007467,-0.0826709711212632,-0.147035400140263,-0.139337045546437,-0.09719022259209,-0.171360409490126,-0.296809798187303,-0.230511577111949,-0.295804650577134,0.0957758289801205,0.271519979378018,0.134221653419691,-0.0428920139744996,0.123151439770098,0.310106455550951,0.291232557941329,0.365785664851431,0.260864433291771,0.408242787384452,0.197399741733335,0.161819516634137,0.185964576717993,0.472225350491291,0.197050547556659,0.0551308714497416,0.162700946513137,0.172674353613301,0.0539413580450916,0.0915203608641868,0.0872267011983314,0.173286437488242,0.176724771269106,0.168777627495953,0.119826595940541,0.177844609992895,0.137746939852282,0.157525556458612,0.17859267673022,0.149598799366546,0.0823963183435978,0.164963786751319,0.119379702934752,0.109992423040523,0.157794977944606,0.161247907225142,0.178792934186385,0.0829190954864302,0.166200908417795,0.198674691296437,0.216987077557218,0.189028172934432,0.164292843004116,0.151095841173428,0.189318432403107,0.174020591443962,0.145667537582829,0.243857597932414,0.169080865530436,0.131773586561799,0.105378961808481,0.240995641090648,0.107396277232926,0.0237583268944177,0.0836485047700577,-0.0900663643967735
|coexpression_dpi_cluster_scores_median=0.266074885746407,-0.179820238452656,-0.309824270834808,-0.266248904349985,-0.309824270834808,0.0542162617068089,-0.143059917866607,0.0746319571913844,-0.273269847834214,-0.0788153229028168,-0.253121133558571,-0.309824270834808,-0.241192936453657,-0.309824270834808,-0.24885693956415,-0.309824270834808,-0.373722848159102,-0.309824270834808,-0.373722848159102,-0.309824270834808,0.515980084762712,-0.309824270834808,-0.309824270834808,-0.166178881300423,-0.0982482743016992,-0.183945976765515,-0.309824270834808,-0.164475732345277,-0.234268762517411,-0.283399922904091,-0.21431778731214,-0.309824270834808,-0.309824270834808,-0.373722848159102,-0.199621349162167,-0.243038331962332,-0.309824270834808,-0.309824270834808,-0.309824270834808,-0.309824270834808,-0.309824270834808,-0.309824270834808,-0.309824270834808,-0.168964578667912,-0.194503121068016,-0.309824270834808,-0.309824270834808,-0.223845047177992,-0.309824270834808,-0.0787830153662569,-0.26652209269207,-0.373722848159102,-0.116453512918132,0.00827975110719531,-0.255177754657274,-0.27429794436885,-0.373722848159102,-0.12921901671426,0.321960876938179,0.337647041899498,0.0816070052529236,-0.309824270834808,-0.373722848159102,-0.373722848159102,-0.373722848159102,-0.373722848159102,-0.196014531229321,-0.133425205874946,0.0437091542688929,0.0143231058668548,-0.0446997541387395,0.498079606833711,0.324958018248856,0.0374877852336264,0.00283963362299194,0.0793564989123899,0.131741556803013,0.192294182552253,0.157773176093491,0.295845366848809,0.456462871832313,0.286101292830148,0.160627529521563,0.440343296492619,0.359228227756575,0.457366590066764,0.643104400434325,0.371800665053545,-0.155308600672785,-0.196606956141495,-0.309824270834808,-0.104110943478128,-0.309824270834808,-0.373722848159102,-0.163589611744981,-0.373722848159102,0,-0.309824270834808,-0.309824270834808,-0.373722848159102,0.313030004446025,-0.309824270834808,-0.373722848159102,-0.373722848159102,-0.309824270834808,-0.282938919276862,-0.309824270834808,-0.00622850791708257,-0.124080965999031,0.0858155348919365,0,0.141469716371772,0.00352746996347286,-0.0301604321547366,0.149782192089753,-0.169271490212163,-0.309824270834808,-0.153336279147299,-0.309824270834808,-0.188089267024391,-0.222144914575332,-0.138134301458135,-0.373722848159102,0.0106090768835214,-0.0980791473070548,0.135499556461746,-0.139779610771459,-0.373722848159102,-0.211478093953495,0.605213020422318,1.86051366941928,0.751419028435331,0.802357486930992,0.889532929668536,0.931105580064014,1.42592361493886,0.126540234137132,0.541185759280882,1.14956072871376,1.25323743068072,0.262178955003944,0.137370382821572,0.21402720549933,0.498074103055528,0.864743777745717,0.883438503398654,0.837064345757485,1.7646631573903,0.252978756773167,0.322740806235931,0.310011760609381,0.130071197504154,0.403725804188239,0.108875323768223,0.207923334382708,-0.126675227493088,-0.309824270834808,-0.373722848159102,-0.272394381556493,-0.171130609956439,-0.0367370161647466,-0.23791942264623,-0.0843615937498197,-0.108347206747101,-0.215829353976548,-0.219025381981047,-0.124580759007737,-0.207274566719268,-0.0490854297200976,-0.0495531246063674,-0.137684817579016,-0.250563871477611,-0.287523196566209,-0.194390095608334,0.352671082780803,0.3100999808221,-0.309824270834808,-0.0676110618223058,0.214723828507507,0.211623296797817,0.257529859937882,0.316201441873754,0.389271397660402,0.264806429919279,0.254640257804432,0.469867991279119,0.496052151441654,0.541263749844372,0.442065386540215,0.186771099475446,0.19005249914626,0.173938976470258,-0.0510054978786874,0.0777529022664378,0.0179590136097269,0.0369017953719312,0.0253757695548123,-0.0264367192161519,-0.0259981276392587,0.126051737674557,0.10199935520539,0.0620515116348027,-0.268258050985148,-0.242811061916672,-0.295788732238063,-0.219729307088682,-0.229609143944792,-0.287180928019549,-0.309824270834808,-0.309824270834808,-0.308466182389434,-0.204463504575128,-0.309824270834808,-0.0682075977519433,-0.191877965527732,-0.275917764175865,-0.240568963324814,-0.138846114381964,0.629185978285325,-0.0143228686844051,-0.0504477694917788,-0.00480186111514774,0.0410548105703905,-0.0117895549244895,0.0115726677879503,0.130486903584098,0.482629639883075,0.353728639995663,0.381186779342273,0.566685548050766,0.421980178254794,0.369398790341669,-0.373722848159102,-0.373722848159102,-0.012385815811578,-0.119083597279855,0.383648350905956,0.309761072362871,-0.309824270834808,-0.21205661717477,0.274458768459533,0.14307392392751,0.378383795158819,-0.138976230190537,0.22809368294535,0.00197124001123544,0.108351489034486,0.272879628556325,0.266173014790143,0.376441510306883,0.0274526876984587,0.0058089190982627,0.0821657430691026,0.569280322749627,-0.309824270834808,0.122098241392921,-0.036761145187894,-0.0154826248830631,-0.0343043026188187,0.229186701941961,0.0329143579823674,0.128868450108911,-0.0578590679010084,0.16655007089198,-0.309824270834808,-0.373722848159102,1.22626782958996,0.227622414222119,0.195203222469318,0.42233490972547,0.676484780670554,0.505051221997769,0.776155685135715,0.946653829268628,-0.142700959524619,-0.0673245350526894,0.386489399832343,-0.011120163850476,-0.0868160670662863,-0.0183534391966015,0.00705799431511117,-0.0759961633602427,0.372085030947407,0.327430779815935,-0.0836154006732592,-0.292236247088765,-0.140271286340913,-0.186471121256628,-0.191587022451399,-0.217389350310051,0.101821901053276,0.0442001974113728,0.113839656565574,-0.309824270834808,-0.02588054758937,0.108177436185384,0.0445917224773009,0.04323170467152,0.150718099975682,0.1539701391965,0.209255303908465,0.0290089285872372,0.124603863055723,-0.0229558041254151,-0.309824270834808,-0.138576958762219,-0.185673304657904,0.0656194308546418,-0.0940288153024939,-0.202939384322194,-0.142675677621443,-0.0920714304584841,-0.266517277725815,-0.215848121271325,-0.183441952739755,-0.190564711642702,0.225811906040384,0.362051250699219,0.140254092571987,-0.0282174913387402,-0.0328648380213389,-0.145190254808682,-0.150537299499073,-0.196234758244128,-0.154192872140856,-0.0709025096113146,-0.137428787047019,-0.233393677664117,-0.143243909181412,-0.221075148837069,-0.293948489324621,-0.309824270834808,-0.309824270834808,0.0959516886760703,0.260289281196302,0.0108397451497176,-0.104800217812466,0.0970159403453207,0.368060008168705,0.208903629087668,0.373157545218969,0.248925762980065,0.389373879917068,0.133025637059654,0.258388017132371,0.202273647578552,0.484917594079702,0.232463667323066,0.0678756652848843,0.166590589540834,0.17055776895351,0.0356540670660742,0.0823963041035528,0.0720642632040713,0.227328900009392,0.145677707374413,0.171331465477684,0.205290868838581,0.167349283066757,0.178005278692482,0.148485679083378,0.16267856261964,0.160410635660899,0.0821575600649387,0.147112499911127,0.18727259045805,0.112059531961277,0.234539197042735,0.157766896309698,0.241672174992996,0.0758922852042035,0.128731072906639,0.201421562340486,0.206657479000664,0.141851617108976,0.217499763952923,0.131942086401446,0.13014232294725,0.204134625498046,0.119646882897131,0.22867233102993,0.146426658128499,0.187268303180534,0.087918257050045,0.142642826256795,0.0888269427022196,0.0538087935043944,0.124937190860412,-0.0960267733723028
|gostat_on_MCL_coexpression=GO:0030695;GTPase regulator activity;0.00796099684375163;237422,19739!
|ontology_enrichment_celltype=CL:0000540!4.37e-07!33;CL:0000047!4.37e-07!33;CL:0000031!4.37e-07!33;CL:0000404!4.37e-07!33
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0002346!5.51e-19!64;UBERON:0003075!5.51e-19!64;UBERON:0007284!5.51e-19!64;UBERON:0010371!6.99e-18!73;UBERON:0003056!2.36e-16!49;UBERON:0004121!8.41e-16!95;UBERON:0000924!8.41e-16!95;UBERON:0006601!8.41e-16!95;UBERON:0001017!1.30e-14!73;UBERON:0001016!9.03e-14!75;UBERON:0000073!1.36e-13!54;UBERON:0001049!1.46e-13!52;UBERON:0005068!1.46e-13!52;UBERON:0006241!1.46e-13!52;UBERON:0007135!1.46e-13!52;UBERON:0003080!5.49e-12!40;UBERON:0002780!1.98e-11!39;UBERON:0001890!1.98e-11!39;UBERON:0006240!1.98e-11!39;UBERON:0000955!3.18e-11!47;UBERON:0006238!3.18e-11!47;UBERON:0010314!3.79e-11!92;UBERON:0002616!8.50e-11!46;UBERON:0002020!7.72e-09!34
}}

Latest revision as of 18:47, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr10:84380402..84380437,+p3@Ric8b
Mm9::chr11:109159404..109159432,-p2@Rgs9
Mm9::chr11:109159435..109159456,-p1@Rgs9


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0030695GTPase regulator activity0.00796099684375163



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Cell Type
Ontology termp-valuen
neuron4.37e-0733
neuronal stem cell4.37e-0733
neuroblast4.37e-0733
electrically signaling cell4.37e-0733


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.11.35193
MA0004.10.801718
MA0006.10.60285
MA0007.10.784593
MA0009.11.27673
MA0014.10.416365
MA0017.10.635031
MA0019.11.08369
MA0024.11.23079
MA0025.11.51835
MA0027.12.9431
MA0028.11.49373
MA0029.11.20789
MA0030.11.21482
MA0031.11.17722
MA0038.10.963265
MA0040.11.28983
MA0041.10.714279
MA0042.10.69885
MA0043.11.3775
MA0046.11.31428
MA0048.11.66457
MA0050.10.845669
MA0051.10.973068
MA0052.11.29825
MA0055.11.06076
MA0056.10
MA0057.10.337566
MA0058.10.690848
MA0059.10.705317
MA0060.11.25521
MA0061.13.37324
MA0063.10
MA0066.10.951196
MA0067.11.63197
MA0068.10.343188
MA0069.11.29861
MA0070.11.28847
MA0071.10.844726
MA0072.11.2796
MA0073.10.121346
MA0074.10.911576
MA0076.10.657929
MA0077.11.2569
MA0078.11.0091
MA0081.10.732313
MA0083.11.37668
MA0084.11.96428
MA0087.11.33189
MA0088.10.27999
MA0089.10
MA0090.10.762482
MA0091.10.816659
MA0092.10.762845
MA0093.10.62555
MA0095.10
MA0098.10
MA0100.10.89873
MA0101.11.70277
MA0103.11.56167
MA0105.13.76751
MA0106.11.01755
MA0107.12.61846
MA0108.21.10817
MA0109.10
MA0111.10.778753
MA0113.10.986839
MA0114.10.537669
MA0115.11.38041
MA0116.10.602598
MA0117.11.34691
MA0119.10.716476
MA0122.11.36752
MA0124.11.57762
MA0125.11.5017
MA0130.10
MA0131.11.07881
MA0132.10
MA0133.10
MA0135.11.4152
MA0136.10.933582
MA0139.11.16863
MA0140.10.898603
MA0141.10.671467
MA0142.11.16183
MA0143.11.00467
MA0144.10.541532
MA0145.10.794492
MA0146.10.900029
MA0147.10.556853
MA0148.10.820161
MA0149.18.52387
MA0062.20.412742
MA0035.20.903829
MA0039.20.0481552
MA0138.21.07027
MA0002.20.466067
MA0137.20.668025
MA0104.20.48458
MA0047.20.962424
MA0112.20.29236
MA0065.20.79573
MA0150.10.784464
MA0151.10
MA0152.10.962542
MA0153.11.43238
MA0154.10.35067
MA0155.10.312898
MA0156.10.656895
MA0157.11.12772
MA0158.10
MA0159.10.569393
MA0160.10.823568
MA0161.10
MA0162.10.499274
MA0163.10.927936
MA0164.10.933981
MA0080.20.64167
MA0018.20.944669
MA0099.21.06348
MA0079.20.166764
MA0102.22.01714
MA0258.10.520639
MA0259.10.543506
MA0442.10
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:2594&oldid=3074593"