FFCP PHASE1:Hg19::chr12:75603643..75603652,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3747 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6234 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000549446_5end | |||
|coexpression_cluster_id=C3331 | |||
|description=CAGE_peak_19_at_KCNC2_5end | |||
|id=chr12:75603643..75603652,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002902;3.99e-50;1!UBERON:0009899;3.99e-50;1!UBERON:0002021;3.31e-40;5!UBERON:0000988;9.45e-18;3!UBERON:0000955;4.62e-11;68!UBERON:0001950;1.77e-10;20!UBERON:0002619;1.17e-09;22!UBERON:0002298;1.44e-09;6!UBERON:0000956;1.15e-08;25!UBERON:0000203;1.15e-08;25!UBERON:0001893;3.69e-07;34!UBERON:0001017;7.45e-07;75!UBERON:0002680;8.37e-07;9!UBERON:0001895;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,6.58e-50,1;UBERON:0009899,6.58e-50,1;UBERON:0002021,4.05e-40,5;UBERON:0000988,8.00e-18,3;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0001950,1.86e-10,20;UBERON:0001017,2.17e-10,81;UBERON:0002619,1.22e-09,22;UBERON:0002298,1.32e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0001049,1.07e-08,56;UBERON:0005068,1.07e-08,56;UBERON:0006241,1.07e-08,56;UBERON:0007135,1.07e-08,56;UBERON:0000956,1.20e-08,25;UBERON:0000203,1.20e-08,25;UBERON:0007023,8.86e-08,114;UBERON:0002791,5.04e-07,32;UBERON:0001869,5.04e-07,32;UBERON:0002680,7.91e-07,9;UBERON:0001895,7.91e-07,9;UBERON:0010092,7.91e-07,9 | |||
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|short_description=p19@KCNC2 | |||
}} |
Revision as of 14:44, 11 January 2014
Short description: | p19@KCNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_KCNC2_5end |
Coexpression cluster: | C3331_brain_occipital_paracentral_parietal_insula_postcentral_pons |
Association with transcript: | 0bp_to_ENST00000549446_5end |
EntrezGene: | KCNC2 |
HGNC: | 6234 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital pole | 6.58e-50 | 1 |
pole of cerebral hemisphere | 6.58e-50 | 1 |
occipital lobe | 4.05e-40 | 5 |
pons | 8.00e-18 | 3 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
neocortex | 1.86e-10 | 20 |
central nervous system | 2.17e-10 | 81 |
regional part of cerebral cortex | 1.22e-09 | 22 |
brainstem | 1.32e-09 | 6 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |
cerebral cortex | 1.20e-08 | 25 |
pallium | 1.20e-08 | 25 |
adult organism | 8.86e-08 | 114 |
regional part of telencephalon | 5.04e-07 | 32 |
cerebral hemisphere | 5.04e-07 | 32 |
regional part of metencephalon | 7.91e-07 | 9 |
metencephalon | 7.91e-07 | 9 |
future metencephalon | 7.91e-07 | 9 |