FFCP PHASE1:Hg19::chr13:21141254..21141265,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8100 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20606 | |||
|TSSclassifier=strong | |||
|UniProt=Q13099 | |||
|association_with_transcript=-11bp_to_ENST00000319980_5end | |||
|description=CAGE_peak_2_at_IFT88_5end | |||
|id=chr13:21141254..21141265,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.61e-11!57;UBERON:0005068!3.61e-11!57;UBERON:0006241!3.61e-11!57;UBERON:0007135!3.61e-11!57;UBERON:0000955!2.06e-10!69;UBERON:0006238!2.06e-10!69;UBERON:0002020!7.78e-10!34;UBERON:0003528!7.78e-10!34;UBERON:0000073!1.26e-09!94;UBERON:0001016!1.26e-09!94;UBERON:0002616!2.08e-09!59;UBERON:0001893!2.32e-09!34;UBERON:0001017!2.58e-09!82;UBERON:0002791!2.69e-09!33;UBERON:0005743!2.73e-09!86;UBERON:0003075!4.16e-09!86;UBERON:0007284!4.16e-09!86;UBERON:0002346!5.69e-09!90;UBERON:0001869!1.62e-08!32;UBERON:0002780!2.22e-08!41;UBERON:0001890!2.22e-08!41;UBERON:0006240!2.22e-08!41;UBERON:0003080!2.31e-08!42;UBERON:0003056!1.68e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.80e-08;34!UBERON:0002020;2.80e-08;34!UBERON:0002791;3.77e-08;32!UBERON:0001893;1.86e-07;34!UBERON:0002780;2.66e-07;41!UBERON:0001890;2.66e-07;41!UBERON:0001869;4.70e-07;32!UBERON:0000956;9.91e-07;25!UBERON:0000203;9.91e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.59e-12,56;UBERON:0005068,2.59e-12,56;UBERON:0006241,2.59e-12,56;UBERON:0007135,2.59e-12,56;UBERON:0003075,5.02e-12,82;UBERON:0007284,5.02e-12,82;UBERON:0002346,1.78e-11,86;UBERON:0000073,5.43e-11,53;UBERON:0002616,5.43e-11,53;UBERON:0000955,1.55e-10,68;UBERON:0006238,1.55e-10,68;UBERON:0003528,2.80e-10,34;UBERON:0002020,2.80e-10,34;UBERON:0001016,4.12e-10,89;UBERON:0003056,5.96e-10,61;UBERON:0001017,1.39e-09,81;UBERON:0010371,1.95e-09,104;UBERON:0002780,3.59e-09,41;UBERON:0001890,3.59e-09,41;UBERON:0003080,3.59e-09,41;UBERON:0006240,3.59e-09,41;UBERON:0002791,4.44e-09,32;UBERON:0001893,4.77e-09,34;UBERON:0010314,5.71e-09,132;UBERON:0001869,6.71e-08,32 | |||
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| |||
|short_description=p2@IFT88 | |||
}} |
Revision as of 16:53, 11 January 2014
Short description: | p2@IFT88 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IFT88_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000319980_5end |
EntrezGene: | IFT88 |
HGNC: | 20606 |
UniProt: | Q13099 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.59e-12 | 56 |
neural rod | 2.59e-12 | 56 |
future spinal cord | 2.59e-12 | 56 |
neural keel | 2.59e-12 | 56 |
neural plate | 5.02e-12 | 82 |
presumptive neural plate | 5.02e-12 | 82 |
neurectoderm | 1.78e-11 | 86 |
regional part of nervous system | 5.43e-11 | 53 |
regional part of brain | 5.43e-11 | 53 |
brain | 1.55e-10 | 68 |
future brain | 1.55e-10 | 68 |
brain grey matter | 2.80e-10 | 34 |
gray matter | 2.80e-10 | 34 |
nervous system | 4.12e-10 | 89 |
pre-chordal neural plate | 5.96e-10 | 61 |
central nervous system | 1.39e-09 | 81 |
ecto-epithelium | 1.95e-09 | 104 |
regional part of forebrain | 3.59e-09 | 41 |
forebrain | 3.59e-09 | 41 |
anterior neural tube | 3.59e-09 | 41 |
future forebrain | 3.59e-09 | 41 |
regional part of telencephalon | 4.44e-09 | 32 |
telencephalon | 4.77e-09 | 34 |
structure with developmental contribution from neural crest | 5.71e-09 | 132 |
cerebral hemisphere | 6.71e-08 | 32 |