FFCP PHASE1:Hg19::chr13:46549598..46549676,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1384 | |||
|description=CAGE_peak_at_chr13:46549598..46549676,+ | |||
|id=chr13:46549598..46549676,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.42e-11!235;DOID:14566!1.87e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.38e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.37e-12!57;UBERON:0005068!3.37e-12!57;UBERON:0006241!3.37e-12!57;UBERON:0007135!3.37e-12!57;UBERON:0001017!1.91e-11!82;UBERON:0000073!2.19e-11!94;UBERON:0001016!2.19e-11!94;UBERON:0000955!1.88e-10!69;UBERON:0006238!1.88e-10!69;UBERON:0003080!1.97e-10!42;UBERON:0005743!2.03e-10!86;UBERON:0002616!4.75e-10!59;UBERON:0002780!5.53e-10!41;UBERON:0001890!5.53e-10!41;UBERON:0006240!5.53e-10!41;UBERON:0007023!4.80e-09!115;UBERON:0002020!3.75e-08!34;UBERON:0003528!3.75e-08!34;UBERON:0002346!2.11e-07!90;UBERON:0002791!2.18e-07!33;UBERON:0001893!4.25e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.33e-08;34!UBERON:0002020;5.33e-08;34!UBERON:0002780;9.79e-08;41!UBERON:0001890;9.79e-08;41!UBERON:0000073;2.85e-07;53!UBERON:0002616;2.85e-07;53!UBERON:0002791;3.33e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.83e-13,56;UBERON:0005068,6.83e-13,56;UBERON:0006241,6.83e-13,56;UBERON:0007135,6.83e-13,56;UBERON:0001016,2.51e-12,89;UBERON:0000073,5.97e-12,53;UBERON:0002616,5.97e-12,53;UBERON:0001017,8.13e-12,81;UBERON:0002780,2.10e-10,41;UBERON:0001890,2.10e-10,41;UBERON:0003080,2.10e-10,41;UBERON:0006240,2.10e-10,41;UBERON:0000955,2.15e-10,68;UBERON:0006238,2.15e-10,68;UBERON:0002346,1.17e-09,86;UBERON:0003528,1.88e-08,34;UBERON:0002020,1.88e-08,34;UBERON:0003075,4.87e-08,82;UBERON:0007284,4.87e-08,82;UBERON:0007023,1.56e-07,114;UBERON:0002791,1.67e-07,32;UBERON:0001893,4.27e-07,34 | |||
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| |||
|short_description=p@chr13:46549598..46549676,+ | |||
}} |
Revision as of 17:37, 11 January 2014
Short description: | p@chr13:46549598..46549676, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr13:46549598..46549676, + |
Coexpression cluster: | C1384_neuroectodermal_occipital_cerebellum_thalamus_caudate_spinal_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 6.83e-13 | 56 |
neural rod | 6.83e-13 | 56 |
future spinal cord | 6.83e-13 | 56 |
neural keel | 6.83e-13 | 56 |
nervous system | 2.51e-12 | 89 |
regional part of nervous system | 5.97e-12 | 53 |
regional part of brain | 5.97e-12 | 53 |
central nervous system | 8.13e-12 | 81 |
regional part of forebrain | 2.10e-10 | 41 |
forebrain | 2.10e-10 | 41 |
anterior neural tube | 2.10e-10 | 41 |
future forebrain | 2.10e-10 | 41 |
brain | 2.15e-10 | 68 |
future brain | 2.15e-10 | 68 |
neurectoderm | 1.17e-09 | 86 |
brain grey matter | 1.88e-08 | 34 |
gray matter | 1.88e-08 | 34 |
neural plate | 4.87e-08 | 82 |
presumptive neural plate | 4.87e-08 | 82 |
adult organism | 1.56e-07 | 114 |
regional part of telencephalon | 1.67e-07 | 32 |
telencephalon | 4.27e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.38e-07 | 235 |