FFCP PHASE1:Hg19::chr13:111365988..111366070,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3621 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6062 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T9H0,Q9UK53 | |||
|association_with_transcript=363bp_to_ENST00000333219,NM_198219,uc001vrh.2_5end | |||
|description=CAGE_peak_1_at_ING1_5end | |||
|id=chr13:111365988..111366070,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.02e-08!53;CL:0000051!4.02e-08!53;CL:0000838!7.27e-08!52;CL:0002393!8.76e-07!9;CL:0002397!8.76e-07!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.02e-08,53;CL:0000051,4.02e-08,53;CL:0000838,7.27e-08,52;CL:0002393,8.76e-07,9;CL:0002397,8.76e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.45e-15!115;UBERON:0001017!2.33e-10!82;UBERON:0005743!7.21e-10!86;UBERON:0000178!5.71e-09!15;UBERON:0000179!5.71e-09!15;UBERON:0000463!5.71e-09!15;UBERON:0001049!9.24e-09!57;UBERON:0005068!9.24e-09!57;UBERON:0006241!9.24e-09!57;UBERON:0007135!9.24e-09!57;UBERON:0000073!1.67e-08!94;UBERON:0001016!1.67e-08!94;UBERON:0002020!4.65e-08!34;UBERON:0003528!4.65e-08!34;UBERON:0003080!1.73e-07!42;UBERON:0001893!2.16e-07!34;UBERON:0002791!2.43e-07!33;UBERON:0001869!2.66e-07!32;UBERON:0000955!4.65e-07!69;UBERON:0006238!4.65e-07!69;UBERON:0002780!4.74e-07!41;UBERON:0001890!4.74e-07!41;UBERON:0006240!4.74e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.14e-09;15!UBERON:0000179;4.14e-09;15!UBERON:0000463;4.14e-09;15!UBERON:0000922;5.97e-08;49!UBERON:0003528;4.96e-07;34!UBERON:0002020;4.96e-07;34!UBERON:0002791;6.33e-07;32!UBERON:0001869;8.16e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.21e-14,114;UBERON:0001017,6.00e-10,81;UBERON:0000178,5.71e-09,15;UBERON:0000179,5.71e-09,15;UBERON:0000463,5.71e-09,15;UBERON:0001016,1.61e-08,89;UBERON:0001049,2.47e-08,56;UBERON:0005068,2.47e-08,56;UBERON:0006241,2.47e-08,56;UBERON:0007135,2.47e-08,56;UBERON:0003528,4.65e-08,34;UBERON:0002020,4.65e-08,34;UBERON:0000073,1.25e-07,53;UBERON:0002616,1.25e-07,53;UBERON:0002791,1.97e-07,32;UBERON:0001893,2.16e-07,34;UBERON:0001869,2.65e-07,32;UBERON:0002780,4.74e-07,41;UBERON:0001890,4.74e-07,41;UBERON:0003080,4.74e-07,41;UBERON:0006240,4.74e-07,41 | |||
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| |||
|short_description=p1@ING1 | |||
}} |
Revision as of 18:41, 11 January 2014
Short description: | p1@ING1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ING1_5end |
Coexpression cluster: | NA |
Association with transcript: | 363bp_to_ENST00000333219, NM_198219, uc001vrh.2_5end |
EntrezGene: | ING1 |
HGNC: | 6062 |
UniProt: | Q5T9H0Q9UK53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.02e-08 | 53 |
common lymphoid progenitor | 4.02e-08 | 53 |
lymphoid lineage restricted progenitor cell | 7.27e-08 | 52 |
intermediate monocyte | 8.76e-07 | 9 |
CD14-positive, CD16-positive monocyte | 8.76e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.21e-14 | 114 |
central nervous system | 6.00e-10 | 81 |
blood | 5.71e-09 | 15 |
haemolymphatic fluid | 5.71e-09 | 15 |
organism substance | 5.71e-09 | 15 |
nervous system | 1.61e-08 | 89 |
neural tube | 2.47e-08 | 56 |
neural rod | 2.47e-08 | 56 |
future spinal cord | 2.47e-08 | 56 |
neural keel | 2.47e-08 | 56 |
brain grey matter | 4.65e-08 | 34 |
gray matter | 4.65e-08 | 34 |
regional part of nervous system | 1.25e-07 | 53 |
regional part of brain | 1.25e-07 | 53 |
regional part of telencephalon | 1.97e-07 | 32 |
telencephalon | 2.16e-07 | 34 |
cerebral hemisphere | 2.65e-07 | 32 |
regional part of forebrain | 4.74e-07 | 41 |
forebrain | 4.74e-07 | 41 |
anterior neural tube | 4.74e-07 | 41 |
future forebrain | 4.74e-07 | 41 |