FFCP PHASE1:Hg19::chr15:99943910..99943923,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr15:99943910..99943923,- | |||
|id=chr15:99943910..99943923,- | |||
|ontology_enrichment_celltype=CL:0002194!4.76e-17!63;CL:0000576!4.76e-17!63;CL:0000040!4.76e-17!63;CL:0000559!4.76e-17!63;CL:0002009!1.96e-16!65;CL:0002149!2.51e-15!6;CL:0002255!2.51e-15!6;CL:0000839!4.73e-15!70;CL:0000557!8.48e-15!71;CL:0000766!1.25e-13!76;CL:0000235!1.18e-09!10;CL:0000840!1.31e-09!5;CL:0001029!1.31e-09!5;CL:0002087!8.05e-09!119;CL:0002031!2.46e-08!124;CL:0000763!2.72e-08!112;CL:0000049!2.72e-08!112;CL:0002057!2.19e-07!42;CL:0000313!4.01e-07!1;CL:0000738!5.07e-07!140;CL:0000860!8.13e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000235;8.45e-53;6!CL:0000840;9.21e-31;5!CL:0000990;8.88e-21;8!CL:0000451;3.89e-17;10!CL:0000473;2.57e-12;39!CL:0000234;2.57e-12;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.03e-52,6;CL:0000840,9.21e-31,5;CL:0001029,9.21e-31,5;CL:0002194,7.69e-21,59;CL:0000576,7.69e-21,59;CL:0000040,7.69e-21,59;CL:0000559,7.69e-21,59;CL:0000990,8.88e-21,8;CL:0002009,3.68e-20,61;CL:0000839,1.23e-18,66;CL:0000557,2.33e-18,67;CL:0000451,3.90e-17,10;CL:0000766,4.39e-17,72;CL:0000763,2.48e-11,108;CL:0000049,2.48e-11,108;CL:0002087,1.27e-10,115;CL:0000473,2.05e-10,48;CL:0000234,2.05e-10,48;CL:0002031,3.62e-10,120;CL:0000738,6.25e-09,136;CL:0002032,1.76e-07,161;CL:0000837,1.76e-07,161;CL:0000037,3.77e-07,168;CL:0000988,9.21e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3001!2.51e-15!6;DOID:299!2.93e-10!25;DOID:2152!4.01e-07!1;DOID:120!4.53e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.89e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.70e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001474!2.14e-13!86;UBERON:0002371!8.45e-13!80;UBERON:0004765!6.31e-11!101;UBERON:0001434!6.31e-11!101;UBERON:0002390!2.14e-09!102;UBERON:0003061!2.14e-09!102;UBERON:0002193!2.72e-08!112;UBERON:0002405!5.35e-08!115;UBERON:0004911!4.01e-07!1;UBERON:0002204!4.39e-07!167;UBERON:0002171!5.37e-07!1;UBERON:0006518!5.37e-07!1;UBERON:0008949!5.37e-07!1;UBERON:0000101!5.37e-07!1;UBERON:0002167!5.37e-07!1;UBERON:0001301!9.51e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.51e-16,76;UBERON:0001474,5.45e-15,82;UBERON:0004765,1.21e-13,90;UBERON:0002405,3.38e-13,93;UBERON:0002390,1.63e-12,98;UBERON:0003061,1.63e-12,98;UBERON:0001434,2.94e-12,100;UBERON:0002193,2.48e-11,108;UBERON:0002204,3.40e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,1.29096936716765,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,4.21911611751088,4.70150290708022,4.12169677608482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27605971194933,2.0808362720422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30586246527318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86123831398592,0.955538938977433,0.782988022584546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:99943910..99943923,- | |||
}} |
Revision as of 01:31, 12 January 2014
Short description: | p@chr15:99943910..99943923, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:99943910..99943923, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.03e-52 | 6 |
immature conventional dendritic cell | 9.21e-31 | 5 |
common dendritic progenitor | 9.21e-31 | 5 |
monopoietic cell | 7.69e-21 | 59 |
monocyte | 7.69e-21 | 59 |
monoblast | 7.69e-21 | 59 |
promonocyte | 7.69e-21 | 59 |
conventional dendritic cell | 8.88e-21 | 8 |
macrophage dendritic cell progenitor | 3.68e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.23e-18 | 66 |
granulocyte monocyte progenitor cell | 2.33e-18 | 67 |
dendritic cell | 3.90e-17 | 10 |
myeloid leukocyte | 4.39e-17 | 72 |
myeloid cell | 2.48e-11 | 108 |
common myeloid progenitor | 2.48e-11 | 108 |
nongranular leukocyte | 1.27e-10 | 115 |
defensive cell | 2.05e-10 | 48 |
phagocyte | 2.05e-10 | 48 |
hematopoietic lineage restricted progenitor cell | 3.62e-10 | 120 |
leukocyte | 6.25e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.76e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-07 | 161 |
hematopoietic stem cell | 3.77e-07 | 168 |
hematopoietic cell | 9.21e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.51e-16 | 76 |
bone element | 5.45e-15 | 82 |
skeletal element | 1.21e-13 | 90 |
immune system | 3.38e-13 | 93 |
hematopoietic system | 1.63e-12 | 98 |
blood island | 1.63e-12 | 98 |
skeletal system | 2.94e-12 | 100 |
hemolymphoid system | 2.48e-11 | 108 |
musculoskeletal system | 3.40e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.70e-11 | 2 |