FFCP PHASE1:Hg19::chr17:61851504..61851570,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11325 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18676 | |||
|TSSclassifier=strong | |||
|UniProt=Q86XP3 | |||
|association_with_transcript=0bp_to_ENST00000389924,NM_007372,NM_203499,uc002jbu.2,uc002jbv.2_5end | |||
|description=CAGE_peak_1_at_DDX42_5end | |||
|id=chr17:61851504..61851570,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.78e-10;82 | |||
|ontology_enrichment_disease=DOID:162!1.30e-08!235;DOID:14566!8.18e-08!239;DOID:0050687!4.81e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.30e-08,235;DOID:14566,8.18e-08,239;DOID:0050687,4.81e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.15e-21!115;UBERON:0000955!2.48e-11!69;UBERON:0006238!2.48e-11!69;UBERON:0000073!1.02e-10!94;UBERON:0001016!1.02e-10!94;UBERON:0001049!4.03e-10!57;UBERON:0005068!4.03e-10!57;UBERON:0006241!4.03e-10!57;UBERON:0007135!4.03e-10!57;UBERON:0001017!5.31e-10!82;UBERON:0002780!6.37e-10!41;UBERON:0001890!6.37e-10!41;UBERON:0006240!6.37e-10!41;UBERON:0003080!1.99e-09!42;UBERON:0002616!2.40e-09!59;UBERON:0005743!2.78e-09!86;UBERON:0001893!2.36e-08!34;UBERON:0001869!3.82e-08!32;UBERON:0002020!6.04e-08!34;UBERON:0003528!6.04e-08!34;UBERON:0002791!6.44e-08!33;UBERON:0002346!2.54e-07!90;UBERON:0003075!6.25e-07!86;UBERON:0007284!6.25e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.02e-07;34!UBERON:0001869;1.87e-07;32!UBERON:0002780;3.39e-07;41!UBERON:0001890;3.39e-07;41!UBERON:0003528;4.16e-07;34!UBERON:0002020;4.16e-07;34!UBERON:0007023;5.22e-07;114!UBERON:0002791;5.78e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.13e-20,114;UBERON:0001016,8.23e-12,89;UBERON:0000955,9.79e-12,68;UBERON:0006238,9.79e-12,68;UBERON:0001049,1.52e-10,56;UBERON:0005068,1.52e-10,56;UBERON:0006241,1.52e-10,56;UBERON:0007135,1.52e-10,56;UBERON:0001017,2.49e-10,81;UBERON:0000073,3.41e-10,53;UBERON:0002616,3.41e-10,53;UBERON:0002780,6.37e-10,41;UBERON:0001890,6.37e-10,41;UBERON:0003080,6.37e-10,41;UBERON:0006240,6.37e-10,41;UBERON:0001893,2.36e-08,34;UBERON:0001869,3.82e-08,32;UBERON:0003528,6.04e-08,34;UBERON:0002020,6.04e-08,34;UBERON:0002791,1.58e-07,32;UBERON:0011216,1.91e-07,223 | |||
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| |||
|short_description=p1@DDX42 | |||
}} |
Revision as of 16:46, 20 January 2014
Short description: | p1@DDX42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DDX42_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000389924, NM_007372, NM_203499, uc002jbu.2, uc002jbv.2_5end |
EntrezGene: | DDX42 |
HGNC: | 18676 |
UniProt: | Q86XP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.13e-20 | 114 |
nervous system | 8.23e-12 | 89 |
brain | 9.79e-12 | 68 |
future brain | 9.79e-12 | 68 |
neural tube | 1.52e-10 | 56 |
neural rod | 1.52e-10 | 56 |
future spinal cord | 1.52e-10 | 56 |
neural keel | 1.52e-10 | 56 |
central nervous system | 2.49e-10 | 81 |
regional part of nervous system | 3.41e-10 | 53 |
regional part of brain | 3.41e-10 | 53 |
regional part of forebrain | 6.37e-10 | 41 |
forebrain | 6.37e-10 | 41 |
anterior neural tube | 6.37e-10 | 41 |
future forebrain | 6.37e-10 | 41 |
telencephalon | 2.36e-08 | 34 |
cerebral hemisphere | 3.82e-08 | 32 |
brain grey matter | 6.04e-08 | 34 |
gray matter | 6.04e-08 | 34 |
regional part of telencephalon | 1.58e-07 | 32 |
organ system subdivision | 1.91e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.30e-08 | 235 |
disease of cellular proliferation | 8.18e-08 | 239 |
cell type cancer | 4.81e-07 | 143 |