FFCP PHASE1:Hg19::chr19:36245984..36246010,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C339 | |||
|description=CAGE_peak_at_chr19:36245984..36246010,+ | |||
|id=chr19:36245984..36246010,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.17e-26!180;CL:0000680!2.73e-18!57;CL:0000056!2.73e-18!57;CL:0000355!2.73e-18!57;CL:0000183!3.28e-18!59;CL:0000187!5.60e-18!54;CL:0000192!5.09e-16!42;CL:0000514!5.09e-16!42;CL:0000393!5.35e-16!60;CL:0000211!5.35e-16!60;CL:0000057!1.41e-14!75;CL:0000136!9.50e-11!15;CL:0000359!1.61e-10!32;CL:0002334!2.11e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000192;3.72e-14;43!CL:0000187;1.07e-11;55!CL:0000136;1.45e-11;13!CL:0000359;1.54e-10;32!CL:0000393;1.28e-09;61!CL:0000211;1.28e-09;61!CL:0002334;4.63e-09;12!CL:0000134;5.73e-07;55!CL:0002539;6.14e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.27e-20,55;CL:0000680,1.88e-20,58;CL:0000056,1.88e-20,58;CL:0000355,1.88e-20,58;CL:0000192,2.20e-18,43;CL:0000514,2.20e-18,43;CL:0000393,7.38e-18,61;CL:0000211,7.38e-18,61;CL:0000136,2.77e-13,15;CL:0000057,3.11e-13,76;CL:0000359,7.90e-11,32;CL:0000048,6.23e-10,427;CL:0000723,3.04e-09,433;CL:0002334,5.10e-09,12;CL:0000034,2.24e-08,441;CL:0002539,9.54e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.72e-14;43!CL:0000355;1.07e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!7.17e-22!63;UBERON:0001015!7.17e-22!63;UBERON:0000383!7.17e-22!63;UBERON:0001134!6.35e-21!61;UBERON:0002036!6.35e-21!61;UBERON:0003082!6.35e-21!61;UBERON:0004290!3.50e-20!70;UBERON:0000914!6.74e-20!83;UBERON:0002329!6.74e-20!83;UBERON:0003077!6.74e-20!83;UBERON:0003059!6.74e-20!83;UBERON:0007282!6.74e-20!83;UBERON:0009618!6.74e-20!83;UBERON:0007285!6.74e-20!83;UBERON:0000475!5.05e-16!365;UBERON:0000486!1.56e-15!82;UBERON:0005256!3.31e-13!143;UBERON:0000481!3.10e-12!347;UBERON:0007023!1.63e-11!115;UBERON:0000119!7.99e-11!312;UBERON:0000483!2.18e-10!309;UBERON:0004872!3.68e-10!84;UBERON:0000468!8.72e-10!659;UBERON:0000479!7.70e-09!787;UBERON:0007100!8.23e-09!27;UBERON:0002100!1.20e-08!216;UBERON:0001013!5.02e-08!14;UBERON:0001135!7.13e-08!15;UBERON:0000477!9.57e-08!286;UBERON:0002049!1.51e-07!79;UBERON:0007798!1.51e-07!79;UBERON:0000948!1.93e-07!24;UBERON:0005498!1.93e-07!24;UBERON:0004140!1.93e-07!24;UBERON:0009881!1.93e-07!24;UBERON:0004141!1.93e-07!24;UBERON:0003084!1.93e-07!24;UBERON:0007005!1.93e-07!24;UBERON:0004139!1.93e-07!24;UBERON:0004291!1.93e-07!24;UBERON:0001009!2.49e-07!113;UBERON:0004111!4.43e-07!241;UBERON:0000490!5.46e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.74e-14;31!UBERON:0001015;4.74e-14;31!UBERON:0000383;4.74e-14;31!UBERON:0001013;4.59e-10;14!UBERON:0001135;7.56e-10;15!UBERON:0004457;2.62e-07;9!UBERON:0000042;2.62e-07;9!UBERON:0004573;5.29e-07;33!UBERON:0004571;5.29e-07;33!UBERON:0002204;5.91e-07;70!UBERON:0004237;6.14e-07;10!UBERON:0004695;6.14e-07;10!UBERON:0002111;6.14e-07;10!UBERON:0004178;6.14e-07;10!UBERON:0003688;6.34e-07;6!UBERON:0002358;6.34e-07;6!UBERON:0003684;6.34e-07;6!UBERON:0001178;6.34e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,7.05e-25,64;UBERON:0001015,7.05e-25,64;UBERON:0000383,7.05e-25,64;UBERON:0001134,1.08e-23,62;UBERON:0002036,1.08e-23,62;UBERON:0003082,1.08e-23,62;UBERON:0002329,2.09e-22,71;UBERON:0003059,2.09e-22,71;UBERON:0007282,2.09e-22,71;UBERON:0004290,2.09e-22,71;UBERON:0009618,2.09e-22,71;UBERON:0007524,4.06e-22,73;UBERON:0003077,8.11e-22,72;UBERON:0007285,8.11e-22,72;UBERON:0007503,2.52e-19,78;UBERON:0000486,1.53e-18,83;UBERON:0005256,5.98e-17,122;UBERON:0003104,4.90e-16,160;UBERON:0009142,4.90e-16,160;UBERON:0000926,2.39e-13,315;UBERON:0004120,2.39e-13,315;UBERON:0006603,2.39e-13,315;UBERON:0001013,4.65e-10,14;UBERON:0000479,4.81e-10,773;UBERON:0004872,5.85e-10,83;UBERON:0002100,7.78e-10,199;UBERON:0001135,1.28e-09,15;UBERON:0000490,2.43e-09,148;UBERON:0004573,1.39e-07,33;UBERON:0004571,1.39e-07,33;UBERON:0001009,2.42e-07,112;UBERON:0007100,3.19e-07,27;UBERON:0002049,3.24e-07,78;UBERON:0007798,3.24e-07,78;UBERON:0001637,3.42e-07,42;UBERON:0003509,3.42e-07,42;UBERON:0004572,3.42e-07,42;UBERON:0007500,6.19e-07,59;UBERON:0001981,6.19e-07,59;UBERON:0004537,6.19e-07,59;UBERON:0006965,6.19e-07,59;UBERON:0003688,6.39e-07,6;UBERON:0002358,6.39e-07,6;UBERON:0003684,6.39e-07,6;UBERON:0001178,6.39e-07,6;UBERON:0004237,9.54e-07,10;UBERON:0004695,9.54e-07,10;UBERON:0002111,9.54e-07,10;UBERON:0004178,9.54e-07,10 | |||
|phase1_expression=14.352591962374,14.5588356245869,29.6004248601539,14.0102617694383,43.8021872538742,24.4254786748103,27.8629865985142,22.1101955699391,47.0134130759709,0.737201809504527,0.697801167972428,0.873765488520689,1.31883489114227,6.18831764800233,5.63375538737457,6.05092631806598,4.21886169616784,5.11217063271161,6.34312638427659,0.861847406537515,2.04000691244253,3.44800193625897,0.286235987131057,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,6.64885321586358,7.95166135246046,0.50133791063589,9.27017721349272,0,1.45990461090791,0.567208902984407,0.221729397462564,0.43917392846563,1.83370705696798,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.337834441449967,0,0,0,0,0,0,7.45457927542978,7.72446121153937,5.56118559415519,7.45775213946916,12.0587249947441,2.24271040056923,0,0.24666754841716,4.66816553099649,0.942974704487816,1.30769522490767,2.57307626996383,0,3.28050004567315,10.6134426122309,1.1409436430889,7.77133138869366,0.352303495931295,0,0.280901613404497,2.24569588380383,0.859840221182376,2.06651562351531,0,0,1.82032272387605,14.3723628363248,0.505008341862199,0.875829639103749,0.277064115484183,0.438977620880838,0.919463387397059,1.80285670687916,2.83580457900053,0.89694817844431,2.13557388818567,1.48352330811693,2.70081986475962,5.15262646192194,1.8034837803194,3.16398655763703,0.675105328965065,3.89748020644795,2.77677151668526,3.77404584433427,5.98090410229604,2.13005755509969,3.42557133973977,1.3564847384839,0,0,0,0,0,0.116193942869518,0,0,0,0,1.92972281457866,0,21.825292617503,46.9221663085231,0,0,0,0,0,0,0.134831308160164,0,0,0,4.20725321410337,4.5273141246454,20.5812195939759,0,0,0,0.441463099414651,0,1.54411029268673,0,0,0,0.0925884451585296,0,3.11980435583874,0,0.463721619900307,1.52631302506568,0.144366447761074,0.462985512576611,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.190493682876507,0,0,6.84289784090821,0.102827492703324,0.300343057843917,0.285826432630578,0.897048674762886,1.30788020649984,1.3200891447771,0.387815147273333,92.9906759214894,0,14.6265964121679,10.4007436911366,2.82928111688356,2.83698264046557,3.99633268524149,64.0541411588501,85.1915920464566,6.58592269424615,1.62868092146868,39.4485063104226,2.37585561880029,0,0,0.399891964728228,0,0,0,3.83399768786532,2.29723871668228,0,1.01346914667305,1.84928690295345,0.358121926479791,0,0,0,0,0,0,0,0.335032530668698,1.91381625495949,0,0,0,14.7229790062968,14.5049451107306,8.13795071099207,1.45579603071565,0.178428988797162,0.630809660135739,0.35142424497814,0.601892199455438,0,9.31257641632544,2.65690239414175,1.29058417979192,7.29822361531896,6.06983588134496,2.05886054286514,0,0,0,0.303127571446259,1.66435439510497,3.32629322662648,12.6534981987576,3.06923946576125,7.01650236082684,22.8087685675148,6.65219423786715,21.8761332755306,7.42090332224955,3.54682295746108,7.45759246315134,6.65229963711854,1.55776328755086,5.57809816607804,0,0,0,3.55924789310281,5.28064387219479,13.5058147408207,0,0,0.784349769176855,0,0,0,0,0,0,0.812839312631559,1.00337954770971,0,0,0.223874754722178,0,0,0.769350375349168,0.984043937099117,3.25378394664303,0.412164046590889,0,0,0,0,16.068392984416,10.0537547023807,1.69453478826109,2.14905144616581,0.689182862422653,4.51165028446749,6.0907011443976,1.36362603865761,6.05417842397814,0,0,0.127612712494584,0,65.5432224509173,12.5924938732256,1.3940745403212,3.38836938193698,1.06461206063404,4.34966496037536,1.29726953372744,0,2.232950216158,6.01120906965579,7.05331717518152,25.8456769224447,16.6896205333229,6.68226820644467,0,4.31693898199955,7.96157386234559,4.3590588867904,0.606547444719948,6.34041284692033,0.842516912477962,10.727942259971,8.04254515783239,5.28250733783777,4.64099698787152,11.5952454202044,9.04064932961942,2.75682671773062,3.3171948762061,3.94605796728386,42.2506140014682,26.8916848339119,0.202910376962704,2.478587984798,2.81695602532241,14.1977238682011,14.5408580699419,0.35667105148125,7.80474340955315,25.9662391416127,7.57378253807774,1.13841952129715,6.29882496440969,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,4.9812780952444,0,0,0,0.23874448473769,0,0,1.9882952955326,0.703347082052564,0,0,0,8.76691148304707,0.276283915531148,0.251932747854276,0,0,0.622079175323615,0,0,0,13.415503166623,0,0,0,0.74214478529481,0,0,0,2.89999830173917,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.331737779793674,0.591095237907095,0.219385397153973,0,0,5.309567836762,0,0,0,0,1.91400695839152,1.4655614944298,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,1.76915129006678,1.83309043480088,0,0,0,0.943615861729479,12.8412423567806,1.40558667435203,0,0,0,3.15667522279512,2.41981432097328,0.612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| |||
|short_description=p@chr19:36245984..36246010,+ | |||
}} |
Revision as of 22:51, 20 January 2014
Short description: | p@chr19:36245984..36246010, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr19:36245984..36246010, + |
Coexpression cluster: | C339_Mesenchymal_heart_leiomyoma_Adipocyte_Smooth_skeletal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.27e-20 | 55 |
muscle precursor cell | 1.88e-20 | 58 |
myoblast | 1.88e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.88e-20 | 58 |
smooth muscle cell | 2.20e-18 | 43 |
smooth muscle myoblast | 2.20e-18 | 43 |
electrically responsive cell | 7.38e-18 | 61 |
electrically active cell | 7.38e-18 | 61 |
fat cell | 2.77e-13 | 15 |
fibroblast | 3.11e-13 | 76 |
vascular associated smooth muscle cell | 7.90e-11 | 32 |
multi fate stem cell | 6.23e-10 | 427 |
somatic stem cell | 3.04e-09 | 433 |
preadipocyte | 5.10e-09 | 12 |
stem cell | 2.24e-08 | 441 |
aortic smooth muscle cell | 9.54e-07 | 10 |