FFCP PHASE1:Hg19::chr19:39889428..39889470,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55588 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23074 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=230bp_to_AK026527_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_MED29_5end | |||
|id=chr19:39889428..39889470,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.22e-50!42;CL:0000860!2.50e-47!45;CL:0000738!3.83e-45!140;CL:0000766!4.42e-45!76;CL:0000557!1.25e-39!71;CL:0002009!3.94e-38!65;CL:0000839!1.06e-36!70;CL:0002194!5.12e-36!63;CL:0000576!5.12e-36!63;CL:0000040!5.12e-36!63;CL:0000559!5.12e-36!63;CL:0002031!6.68e-35!124;CL:0002087!6.62e-34!119;CL:0000037!7.32e-33!172;CL:0000566!7.32e-33!172;CL:0000988!2.72e-30!182;CL:0002032!9.63e-30!165;CL:0000837!9.63e-30!165;CL:0000763!4.82e-29!112;CL:0000049!4.82e-29!112;CL:0000134!1.34e-11!358;CL:0002320!3.07e-11!365;CL:0002393!3.18e-11!9;CL:0002397!3.18e-11!9;CL:0000219!6.55e-10!390;CL:0000094!6.82e-08!8;CL:0000723!3.96e-07!436;CL:0000048!5.62e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.33e-101;33!CL:0002057;2.33e-101;33!CL:0000473;6.64e-75;39!CL:0000234;6.64e-75;39!CL:0000576;1.87e-68;48!CL:0000766;3.19e-48;69!CL:0002393;1.70e-21;6!CL:0002397;1.70e-21;6!CL:0000763;4.03e-21;100!CL:0002087;1.72e-18;104!CL:0000094;1.39e-15;8!CL:0000738;6.60e-15;136!CL:0000767;6.25e-12;3!CL:0000081;3.79e-11;11!CL:0000226;6.18e-11;3!CL:0000842;6.18e-11;3!CL:0000988;9.13e-09;177!CL:0001014;6.42e-08;2!CL:0001016;6.42e-08;2!CL:0000771;6.76e-08;2!CL:0000219;9.14e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.90e-129,42;CL:0002057,9.90e-129,42;CL:0000473,5.39e-117,48;CL:0000234,5.39e-117,48;CL:0000766,3.11e-103,72;CL:0002009,1.19e-97,61;CL:0000557,2.37e-92,67;CL:0002194,1.33e-91,59;CL:0000576,1.33e-91,59;CL:0000040,1.33e-91,59;CL:0000559,1.33e-91,59;CL:0000839,4.63e-85,66;CL:0000763,9.13e-72,108;CL:0000049,9.13e-72,108;CL:0000738,7.02e-68,136;CL:0002087,5.91e-55,115;CL:0000037,6.96e-53,168;CL:0002031,3.72e-52,120;CL:0000988,1.23e-49,177;CL:0002032,8.26e-49,161;CL:0000837,8.26e-49,161;CL:0000134,3.54e-20,354;CL:0002320,1.46e-19,361;CL:0002393,1.13e-18,9;CL:0002397,1.13e-18,9;CL:0000219,2.17e-17,386;CL:0000094,1.34e-15,8;CL:0000048,9.83e-15,427;CL:0000723,2.29e-14,433;CL:0000034,6.81e-14,441;CL:0000767,6.72e-12,3;CL:0000081,3.69e-11,11;CL:0000226,6.07e-11,3;CL:0000842,6.07e-11,3;CL:0000771,5.88e-08,2;CL:0001014,7.01e-08,2;CL:0001016,7.01e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.17e-92;42!CL:0000049;1.95e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.49e-33!80;UBERON:0002390!3.23e-31!102;UBERON:0003061!3.23e-31!102;UBERON:0001474!3.22e-30!86;UBERON:0002193!1.20e-27!112;UBERON:0004765!9.60e-25!101;UBERON:0001434!9.60e-25!101;UBERON:0002405!2.76e-21!115;UBERON:0002204!1.97e-11!167;UBERON:0003081!7.95e-11!216;UBERON:0002384!1.52e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.42e-80,76;UBERON:0001474,8.75e-74,82;UBERON:0002390,9.68e-73,98;UBERON:0003061,9.68e-73,98;UBERON:0004765,2.20e-66,90;UBERON:0002193,4.50e-65,108;UBERON:0002405,6.22e-64,93;UBERON:0001434,8.84e-59,100;UBERON:0002204,3.50e-31,167;UBERON:0003081,1.07e-29,203;UBERON:0002384,1.01e-18,371;UBERON:0000926,2.67e-15,315;UBERON:0004120,2.67e-15,315;UBERON:0006603,2.67e-15,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,15.3412067971073,8.06041736004147,14.0882672217629,0,0,0,0,0,0,29.3617566521895,13.0353890855592,16.7098370451206,0,0,0.257575567634187,3.92575244704825,3.40088349319928,5.33684934613196,8.13501629169896,7.40102198439286,15.4853185447552,19.8507750702284,11.5272317938095,28.6143498165188,19.6505038019873,18.719055823931,25.7310324529249,5.64727018627814,4.91231070104122,10.562003768919,12.549439587207,10.269728866435,15.983428144976,7.25672860410775,6.58230070151385,11.5080682643827,5.5139755339431,4.53908179752912,7.4738669879469,15.8286659111748,11.9941071236646,27.5829832775498,5.44859552370032,6.62899744777616,11.3926459478718,5.0701268714866,6.59073329891635,3.77385561915077,5.50410292617826,3.15371474967163,2.73233497385036,1.71007646244749,0.39783335439818,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,1.04535523804977,0,0.383220493601921,0,0,0.318565414324097,0.651083453856419,0,0.301150238155546,0,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.953962497221368,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,3.9534125230819,7.75560528296651,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,1.18800285728205,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0,0,0,0,0.179117045405697,0,0,0,0.088048434013226,1.24396869324463,0.288239906833923,0.6312121671319,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0,0,1.37921532141349,1.07813787429759,0.898401253958239,0,0,0,0,0,0.749007023947182,0,2.07207756718018,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,2.89475236572042,5.39285502046542,7.4709290462411,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,1.29694662238543,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0.111443384277478,0.284136146806413,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.293977192243133,0,0,0.171986032471617,0.19351266257817,0,0,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0.19980960958213,0.144090417154106,0,0,0.288109595976299,0,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,10.0594254092533,0,0.335434687599266,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0.363697318405119,0.107410557042488,0,0,0.400027764663154,0,0.336749488765919,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0.157771562193185,0.135982980381829,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p2@MED29 | |||
}} |
Revision as of 23:12, 20 January 2014
Short description: | p2@MED29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MED29_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 230bp_to_AK026527_5end |
EntrezGene: | MED29 |
HGNC: | 23074 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.42e-80 | 76 |
bone element | 8.75e-74 | 82 |
hematopoietic system | 9.68e-73 | 98 |
blood island | 9.68e-73 | 98 |
skeletal element | 2.20e-66 | 90 |
hemolymphoid system | 4.50e-65 | 108 |
immune system | 6.22e-64 | 93 |
skeletal system | 8.84e-59 | 100 |
musculoskeletal system | 3.50e-31 | 167 |
lateral plate mesoderm | 1.07e-29 | 203 |
connective tissue | 1.01e-18 | 371 |
mesoderm | 2.67e-15 | 315 |
mesoderm-derived structure | 2.67e-15 | 315 |
presumptive mesoderm | 2.67e-15 | 315 |