FFCP PHASE1:Hg19::chr19:48994505..48994525,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:48994505..48994525,- | |||
|id=chr19:48994505..48994525,- | |||
|ontology_enrichment_celltype=CL:0000066!1.03e-18!254;CL:0002076!1.97e-11!43;CL:0000223!7.86e-10!59;CL:0002368!2.63e-08!13;CL:1000507!2.33e-07!12;CL:1000494!2.33e-07!12;CL:0000082!5.64e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.07e-15;10!CL:1000494;1.07e-15;10!CL:1000497;7.17e-12;17!CL:0002518;7.17e-12;17!CL:1000449;1.18e-11;15!CL:0002368;8.06e-11;13!CL:0002076;1.10e-09;42!CL:0002202;1.22e-08;9!CL:0002632;1.22e-08;9!CL:0002322;1.52e-08;5!CL:0002681;6.64e-08;12!CL:0002584;6.64e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.89e-20,253;CL:1000507,8.34e-16,10;CL:1000494,8.34e-16,10;CL:0002076,2.91e-13,42;CL:1000497,5.99e-12,17;CL:0002518,5.99e-12,17;CL:1000449,9.60e-12,15;CL:0002368,1.02e-10,13;CL:0000223,1.57e-10,58;CL:0002202,1.18e-08,9;CL:0002632,1.18e-08,9;CL:0002322,1.60e-08,5;CL:0002681,5.53e-08,12;CL:0002584,5.53e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000223;7.81e-07;58 | |||
|ontology_enrichment_disease=DOID:0050687!2.80e-09!143;DOID:305!3.46e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.62e-08;4!DOID:1612;2.62e-08;4!DOID:299;6.60e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.64e-08,4;DOID:1612,2.64e-08,4;DOID:305,3.24e-08,106;DOID:299,7.49e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0000464!3.02e-16!104;UBERON:0005177!1.75e-15!107;UBERON:0000466!8.66e-15!126;UBERON:0004119!2.97e-14!169;UBERON:0000925!2.97e-14!169;UBERON:0006595!2.97e-14!169;UBERON:0009569!1.46e-12!113;UBERON:0001007!5.21e-12!155;UBERON:0001555!5.21e-12!155;UBERON:0007026!5.21e-12!155;UBERON:0004921!6.39e-11!129;UBERON:0004185!6.39e-11!129;UBERON:0001004!1.30e-10!72;UBERON:0006554!1.55e-10!44;UBERON:0001008!4.66e-10!45;UBERON:0000077!5.55e-10!130;UBERON:0001041!8.27e-10!98;UBERON:0005178!9.90e-10!34;UBERON:0002224!9.90e-10!34;UBERON:0005911!1.70e-09!82;UBERON:0005153!2.06e-09!37;UBERON:0005181!3.39e-09!35;UBERON:0002113!4.36e-09!27;UBERON:0003918!4.36e-09!27;UBERON:0005095!4.36e-09!27;UBERON:0007687!4.36e-09!27;UBERON:0000489!4.67e-09!32;UBERON:0000065!1.02e-08!53;UBERON:0002048!2.47e-08!22;UBERON:0000117!2.47e-08!22;UBERON:0000171!2.47e-08!22;UBERON:0000170!2.47e-08!22;UBERON:0005597!2.47e-08!22;UBERON:0000118!2.47e-08!22;UBERON:0002553!3.72e-08!70;UBERON:0005172!1.22e-07!55;UBERON:0005173!1.22e-07!55;UBERON:0004807!2.26e-07!28;UBERON:0009773!2.33e-07!12;UBERON:0001231!2.33e-07!12;UBERON:0004810!2.33e-07!12;UBERON:0000915!3.02e-07!52;UBERON:0003887!5.12e-07!21;UBERON:0005157!5.26e-07!51;UBERON:0004802!5.64e-07!19;UBERON:0000115!5.64e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.06e-16;30!UBERON:0001008;3.06e-16;30!UBERON:0002113;8.43e-16;24!UBERON:0011143;8.43e-16;24!UBERON:0004211;1.07e-15;10!UBERON:0009773;1.07e-15;10!UBERON:0001231;1.07e-15;10!UBERON:0004810;1.07e-15;10!UBERON:0000489;1.17e-13;29!UBERON:0006555;1.18e-11;15!UBERON:0004819;1.18e-11;15!UBERON:0001285;1.18e-11;15!UBERON:0007684;1.18e-11;15!UBERON:0005178;4.66e-09;34!UBERON:0002224;4.66e-09;34!UBERON:0005181;7.47e-09;35!UBERON:0001225;6.64e-08;12!UBERON:0008987;6.64e-08;12!UBERON:0007196;1.59e-07;15!UBERON:0001558;1.59e-07;15!UBERON:0005177;1.82e-07;99!UBERON:0000915;7.76e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.10e-16,101;UBERON:0009569,2.94e-16,112;UBERON:0004810,8.34e-16,10;UBERON:0002113,3.21e-14,26;UBERON:0003918,3.21e-14,26;UBERON:0011143,3.21e-14,26;UBERON:0005095,3.21e-14,26;UBERON:0007687,3.21e-14,26;UBERON:0000489,2.15e-12,31;UBERON:0004211,9.60e-12,15;UBERON:0009773,9.60e-12,15;UBERON:0001231,9.60e-12,15;UBERON:0001285,9.60e-12,15;UBERON:0007684,9.60e-12,15;UBERON:0004208,9.60e-12,15;UBERON:0006554,1.19e-11,47;UBERON:0001008,2.86e-11,48;UBERON:0006555,8.05e-11,16;UBERON:0004819,8.05e-11,16;UBERON:0003103,1.57e-10,68;UBERON:0004119,1.72e-10,160;UBERON:0000925,1.72e-10,160;UBERON:0006595,1.72e-10,160;UBERON:0005178,2.06e-10,34;UBERON:0002224,2.06e-10,34;UBERON:0000915,3.59e-10,52;UBERON:0005181,5.66e-10,35;UBERON:0001004,2.43e-09,74;UBERON:0000065,5.49e-09,54;UBERON:0001007,6.03e-09,145;UBERON:0001555,6.03e-09,145;UBERON:0007026,6.03e-09,145;UBERON:0005172,1.45e-08,54;UBERON:0005173,1.45e-08,54;UBERON:0004921,2.27e-08,118;UBERON:0001041,3.15e-08,87;UBERON:0001225,5.53e-08,12;UBERON:0008987,5.53e-08,12;UBERON:0005153,5.66e-08,37;UBERON:0007196,1.39e-07,15;UBERON:0001558,1.39e-07,15;UBERON:0005157,2.67e-07,47;UBERON:0002417,3.94e-07,60;UBERON:0000916,3.94e-07,60;UBERON:0002100,3.95e-07,199 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,4.88460817580699,0,0,0.495065411840187,0,0,0,0,0,0.123121058076788,0,0,0,1.77936752594749,1.25542639594803,0,0,0,0,0,0.309632246632152,7.35536979583142,3.614471025339,14.7901604066715,0.154934401160603,0.426507697462265,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945348171640679,0.443458794925128,0.351339142772504,1.37528029272598,16.7575832614569,26.6964798804789,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8798561378439,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0.966304265816484,2.45471508531751,1.43402297694502,8.17223831068289,5.56625026950238,5.6935032006064,6.63430752098371,3.28017106138317,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0.343135620597051,1.64625428112938,1.1240175325762,0.804231779293047,3.33318402570707,0,0,0,3.13012093432707,0,0,0.462985512576611,0,116.160046500013,123.622007341662,0,0,0,0.93733833986777,0.335964256397719,1.55952606966625,0.716468181622786,1.74380363108377,5.36735750831296,0,0.088048434013226,0.207328115540772,0.144119953416961,0.50496973370552,0,0,0,1.71072446022705,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.613457458595699,0,0,0,0.178428988797162,0,0,0.300946099727719,2.27407504055985,0,0,0,0,0.979005787313703,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,8.47145098210246,0,0,0,35.6447694196855,22.103401748967,10.1965469992991,4.38417673959782,6.9664075069298,0,0,0,0,1.62567862526312,3.51182841698397,19.880349297513,33.243040357149,3.58199607555485,0,0,1.02580050046556,4.26419039409617,0.650756789328606,0.206082023295445,0,0.577566499444116,1.72279661398852,7.80072295243825,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,1.15699440752685,1.15314040419064,0.255225424989168,10.3180936472661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,2.50177493086331,20.7793705416094,4.3556393944529,0.188287601553558,0.43050537267123,1.68471475667626,2.66058092122005,0.459446800413919,0,0,0,0,0,0,0,0,3.41837027607914,0,0,0.557409525377156,0.721346064882224,0.355709216742071,0,0,0.5745161103971,0.211673582723883,0,0.280797178113459,0.456469358066384,0,0,0,0,0,0,0.687010689511529,0.307240764308458,0,0.166849141711909,0,0,0,0,0,1.4098700508785,8.98274593959455,0.146508179271894,0.242721043499027,0,0,21.2482591416544,0,24.2656954658393,0,0,0.445234820091624,0,0,0.19924798825107,1.93398740871803,0,0.102268682502155,0.492339221844278,0.311039587661807,13.0309109163624,0.716084698702437,1.02314474045374,1.08507746200627,0,0,0,0,0,32.2930423745689,56.32423999755,1.44999915086959,0,34.832750090109,4.96414131712666,0.689486746482929,0,0,0,0,0,0.221158519862449,0,0,0.10893846351899,3.20674611840788,1.07730361905316,0,0,0.179515288819544,0.651884231532048,4.78501739597879,0.366390373607449,0,0,0,0,1.35357396370308,0.588187602953219,1.84603745673427,0.37950746544837,0,3.16497096792041,0.326465616318295,0,0.216388639742091,0,0.796118080530053,0.611030144933625,0,0.123563938946503,0,0,0,0,0.364909578431332,0.19566461893209,0,0.394584402849391,0,0,0.189559738885464,1.20258735531594,0.311064574191741,0,0,0.313932918407225,1.19472429772959,1.99226682220855,0.138674673013139,24.9926023202589,5.6835590500339,0,0.17472666824203,58.4752510403496,0,0,0,1.35784623083787,0.0882561266915003,0.90392296312213,0,0,0.0633107959558787,12.3197371122926,6.09207033911656,3.41524791582964,1.19885765749278,1.15272333723285,0.458146384663663,0,0,0,4.47818665771911,0,0,0,0,0,0,0,0,0,0,0,0,7.38812301846267,0,0,0,0,2.32991899054908,0,0,0,0.196854963029498,0,0,0,1.76828463311521,5.36403802729212,2.49264202817511,0.2249738915515,0,0,0,4.1767024868575,3.56691199317987,2.11200673038813,0.179287339332845,1.72723677587501,0,0,10.9335471191542,0,0,0,0,0.082092520749339,0,0.339936274560377,0.146552233678082,0,0.129282956361551,0.13223260174269,17.9641179778546,0,1.60181118851542,0.471612915298998,1.24271716604159,0,0.988058159489721,1.21792598380896,0,0,0,0,0,1.57054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,8.66379705770371,0,0,0.344429959321631,0.567515953566836,0,22.1009622196722,5.59869534029676,0,0,0,0.1092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| |||
|short_description=p@chr19:48994505..48994525,- | |||
}} |
Revision as of 00:18, 21 January 2014
Short description: | p@chr19:48994505..48994525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:48994505..48994525, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.89e-20 | 253 |
kidney tubule cell | 8.34e-16 | 10 |
nephron tubule epithelial cell | 8.34e-16 | 10 |
endo-epithelial cell | 2.91e-13 | 42 |
kidney cell | 5.99e-12 | 17 |
kidney epithelial cell | 5.99e-12 | 17 |
epithelial cell of nephron | 9.60e-12 | 15 |
respiratory epithelial cell | 1.02e-10 | 13 |
endodermal cell | 1.57e-10 | 58 |
epithelial cell of tracheobronchial tree | 1.18e-08 | 9 |
epithelial cell of lower respiratory tract | 1.18e-08 | 9 |
embryonic stem cell | 1.60e-08 | 5 |
kidney cortical cell | 5.53e-08 | 12 |
renal cortical epithelial cell | 5.53e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.64e-08 | 4 |
breast cancer | 2.64e-08 | 4 |
carcinoma | 3.24e-08 | 106 |
adenocarcinoma | 7.49e-08 | 25 |