FFCP PHASE1:Hg19::chr19:54373050..54373061,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7544 | |||
|TSSclassifier=strong | |||
|UniProt=C9JJV6 | |||
|association_with_transcript=31bp_to_ENST00000414489_5end | |||
|description=CAGE_peak_23_at_MYADM_5end | |||
|id=chr19:54373050..54373061,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.73e-24!112;CL:0000049!2.73e-24!112;CL:0002057!3.11e-22!42;CL:0000860!1.66e-20!45;CL:0000766!4.85e-20!76;CL:0000557!3.06e-16!71;CL:0000839!1.59e-14!70;CL:0002009!3.33e-14!65;CL:0002194!4.52e-13!63;CL:0000576!4.52e-13!63;CL:0000040!4.52e-13!63;CL:0000559!4.52e-13!63;CL:0000037!8.67e-10!172;CL:0000566!8.67e-10!172;CL:0002032!1.79e-09!165;CL:0000837!1.79e-09!165;CL:0000988!1.99e-09!182;CL:0000048!7.70e-09!430;CL:0000034!1.13e-08!444;CL:0000723!2.66e-08!436;CL:0000134!4.18e-08!358;CL:0002320!4.36e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.20e-43;33!CL:0002057;4.20e-43;33!CL:0000473;1.63e-29;39!CL:0000234;1.63e-29;39!CL:0000576;1.17e-22;48!CL:0000766;1.60e-21;69!CL:0000763;3.80e-15;100!CL:0000094;9.59e-13;8!CL:0000097;1.76e-09;5!CL:0000081;6.87e-09;11!CL:0000775;7.18e-08;3!CL:0000163;2.24e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.20e-47,72;CL:0000763,2.99e-43,108;CL:0000049,2.99e-43,108;CL:0000557,7.72e-39,67;CL:0000860,6.20e-38,42;CL:0002057,6.20e-38,42;CL:0000839,5.16e-35,66;CL:0002009,1.17e-32,61;CL:0000473,5.92e-32,48;CL:0000234,5.92e-32,48;CL:0002194,1.14e-29,59;CL:0000576,1.14e-29,59;CL:0000040,1.14e-29,59;CL:0000559,1.14e-29,59;CL:0002032,1.07e-23,161;CL:0000837,1.07e-23,161;CL:0000037,3.25e-23,168;CL:0000988,3.67e-22,177;CL:0000738,4.81e-22,136;CL:0002031,1.96e-16,120;CL:0000094,1.38e-12,8;CL:0002087,1.67e-11,115;CL:0000097,1.21e-09,5;CL:0002028,1.21e-09,5;CL:0000034,1.47e-09,441;CL:0000048,1.99e-09,427;CL:0000134,3.12e-09,354;CL:0000723,4.92e-09,433;CL:0000081,8.82e-09,11;CL:0002320,9.83e-09,361;CL:0000775,7.47e-08,3;CL:0000163,1.75e-07,9;CL:0000219,5.19e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.83e-28;42!CL:0000049;3.71e-11;108 | |||
|ontology_enrichment_disease=DOID:8692!2.79e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.81e-13!80;UBERON:0001474!7.82e-13!86;UBERON:0002390!2.51e-11!102;UBERON:0003061!2.51e-11!102;UBERON:0002193!3.83e-10!112;UBERON:0004765!5.03e-10!101;UBERON:0001434!5.03e-10!101;UBERON:0002204!1.87e-09!167;UBERON:0003081!3.38e-09!216;UBERON:0002384!1.54e-08!375;UBERON:0002405!3.70e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.51e-33,76;UBERON:0001474,3.36e-31,82;UBERON:0004765,2.50e-27,90;UBERON:0002390,4.94e-27,98;UBERON:0003061,4.94e-27,98;UBERON:0002405,1.35e-24,93;UBERON:0001434,2.26e-23,100;UBERON:0002193,2.39e-23,108;UBERON:0002204,1.37e-18,167;UBERON:0003081,9.28e-16,203;UBERON:0000926,8.35e-10,315;UBERON:0004120,8.35e-10,315;UBERON:0006603,8.35e-10,315;UBERON:0002384,1.53e-08,371 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.845726424575827,2.00146596706261,0.446961094427288,1.74467704820074,0,0,0,1.96587149201207,0,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0,1.46062018077475,0.487932798790507,0.246242116153576,0.408001382488506,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,1.39334510984468,0,0,0,0,0,0.880801318004542,0.553995408531877,1.20326668482085,0.868043482863407,0,0,0,2.03557534291391,3.02300754951048,3.15359279544161,2.78914844286822,2.46700732813095,2.78735733805593,2.3015391385772,1.2808035326455,2.83778675866302,2.75796544589295,1.29096936716765,2.70852973188684,1.88242339542605,1.09162460023138,1.57306439111559,1.22433556948361,1.60464513538047,4.47535988059329,3.95821560224059,1.59570926097305,2.98357325372886,3.77272010217159,3.40431134814684,2.4912889959823,1.7587406567972,0.521482918420201,1.73751075764093,1.81619850790011,4.41933163185078,1.58231193720442,0,0.425208599930087,0.628975936525128,0.112328631146495,0.600707571366025,1.12507910687956,0.570025487482497,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,2.64342657158052,1.12101712596307,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0.534880391567015,0,2.43806866313962,0.670700859703636,0.383587685530591,0.722878304769133,0,0.144846518960824,0,0,0.850813354476611,0.886917589850256,1.49319135678314,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0.993943903390637,0.633152558322899,0.794455084879313,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,0.49333509683432,0.622422070799533,0.404132016209064,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0.298897361103602,0,0,0.140450806702248,0.204154171254893,0,0,1.18800285728205,0.247266929278557,0.910161361938026,0.718618141816238,0,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0,0,0.300091096084402,0.309157587715317,0,0,0.168776332241266,0.779496041289589,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.339121184620975,0,0,0,0,0.132529768321485,0,0.207322110030741,0,0,0,1.28648187638577,0,0,0,0.236613600079688,0,0.482022059766964,0.441175890929576,0.217879444092406,0.474541238222193,0,0,0.38474715694639,1.4763109092493,0,0,0,0,0,0,0,0.122988438543114,1.20097467208968,0,0,0.100528972411631,0,0,0,0,0,2.11335649624479,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,9.85326475791887,1.49682337822484,1.65862492432618,1.00883967391873,1.76739406796932,0,0,0,0,0,0,0.285826432630578,0,0,0,0.646358578788889,0,1.690605505112,0,0,0,0,0.532844358032199,0.428933980974443,0,0,0,0,0,1.50719688529793,5.22920075160176,1.09970290300263,0,0,0,0,0,0,0.289562613335158,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,7.49007023947182,8.97484377612075,7.45947924184864,0,0.500170521059677,0,0.831883446123229,0.535286966391485,0.157702415033935,0.35142424497814,0.300946099727719,2.27407504055985,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0.413536052245775,2.37285620900479,0.640365346820666,0,0,0,0.496215615637554,0.153461973288062,0,0.128139149255701,0,0.482561763430822,0,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,0,1.60405176242628,0,0.574072240823034,0.364182336013434,0.262248829918848,0.451199612907412,0,1.56869953835371,1.46139224653261,0.105551628892876,0,0.510281115829547,0.215915916102139,0,0,1.00337954770971,0.254876273045038,0,0,0,0,0.769350375349168,1.64007322849853,0.650756789328606,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0,0,0.382838137483752,0.10115778085555,0,3.46293581513704,0,0.308033580176089,2.12922412126809,0,1.11194531462352,0.143124886741991,0,0,0,0,0,0.318203247925937,1.56989728039846,0,0,0.235624804691373,3.03273722359974,0,0,0.48763373908959,0.731140468893853,1.05650146756755,0.136499911407986,0.565621727814851,0,0.551365343546124,0.66343897524122,1.31535265576129,0.578775534266688,0,1.01455188481352,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0.764637207142375,0.569647187174163,1.19115887728894,1.64544909234478,0.648473311192717,0,0,1.06824071127473,0.962479855263359,0,0,0.28853842595289,0,0,0.399158742865633,0.766021480529467,1.69338866179106,0,0,1.59764275323235,0.94007937463814,0,0.677167111206413,1.2847046008296,0.403599414382095,1.70338495076131,2.40453741329035,3.37964840739304,2.68411329470899,2.33588798396672,0.781552381608161,0.278406173895242,0,0.540911356951966,0,2.8197401017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| |||
|short_description=p23@MYADM | |||
}} |
Revision as of 00:58, 21 January 2014
Short description: | p23@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_MYADM_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000414489_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | C9JJV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.51e-33 | 76 |
bone element | 3.36e-31 | 82 |
skeletal element | 2.50e-27 | 90 |
hematopoietic system | 4.94e-27 | 98 |
blood island | 4.94e-27 | 98 |
immune system | 1.35e-24 | 93 |
skeletal system | 2.26e-23 | 100 |
hemolymphoid system | 2.39e-23 | 108 |
musculoskeletal system | 1.37e-18 | 167 |
lateral plate mesoderm | 9.28e-16 | 203 |
mesoderm | 8.35e-10 | 315 |
mesoderm-derived structure | 8.35e-10 | 315 |
presumptive mesoderm | 8.35e-10 | 315 |
connective tissue | 1.53e-08 | 371 |