FFCP PHASE1:Hg19::chr2:101925307..101925312,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=284996 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23137 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NC42 | |||
|association_with_transcript=-129bp_to_NM_173647_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_RNF149_5end | |||
|id=chr2:101925307..101925312,- | |||
|ontology_enrichment_celltype=CL:0000766!3.20e-55!76;CL:0002057!1.48e-53!42;CL:0000860!4.93e-49!45;CL:0002009!1.79e-48!65;CL:0002194!3.54e-48!63;CL:0000576!3.54e-48!63;CL:0000040!3.54e-48!63;CL:0000559!3.54e-48!63;CL:0000557!5.12e-43!71;CL:0000839!8.81e-42!70;CL:0000763!1.44e-40!112;CL:0000049!1.44e-40!112;CL:0000738!1.56e-38!140;CL:0000037!2.70e-34!172;CL:0000566!2.70e-34!172;CL:0000988!3.78e-31!182;CL:0002087!1.21e-30!119;CL:0002032!2.38e-29!165;CL:0000837!2.38e-29!165;CL:0002031!2.21e-26!124;CL:0000094!4.43e-14!8;CL:0002393!7.68e-12!9;CL:0002397!7.68e-12!9;CL:0000081!1.10e-09!11;CL:0000134!1.42e-09!358;CL:0002320!5.35e-09!365;CL:0000219!5.04e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.78e-53;33!CL:0002057;4.78e-53;33!CL:0000473;4.93e-42;39!CL:0000234;4.93e-42;39!CL:0000576;3.43e-41;48!CL:0000766;1.28e-31;69!CL:0000094;1.47e-24;8!CL:0000081;1.44e-17;11!CL:0000763;5.45e-15;100!CL:0000775;1.99e-13;3!CL:0000875;4.72e-13;3!CL:0002396;4.72e-13;3!CL:0000784;2.56e-12;3!CL:0002393;3.13e-10;6!CL:0002397;3.13e-10;6!CL:0000771;1.29e-09;2!CL:0002087;3.85e-09;104!CL:0000738;6.07e-09;136!CL:0000988;6.84e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.04e-79,42;CL:0002057,1.04e-79,42;CL:0000766,1.12e-75,72;CL:0000473,2.09e-73,48;CL:0000234,2.09e-73,48;CL:0002194,3.68e-61,59;CL:0000576,3.68e-61,59;CL:0000040,3.68e-61,59;CL:0000559,3.68e-61,59;CL:0002009,6.29e-59,61;CL:0000839,6.29e-54,66;CL:0000557,5.13e-53,67;CL:0000763,1.23e-47,108;CL:0000049,1.23e-47,108;CL:0000738,1.55e-42,136;CL:0000037,1.16e-32,168;CL:0002032,9.09e-31,161;CL:0000837,9.09e-31,161;CL:0000988,1.60e-30,177;CL:0002087,1.05e-29,115;CL:0002031,3.87e-28,120;CL:0000094,2.00e-24,8;CL:0002393,1.29e-20,9;CL:0002397,1.29e-20,9;CL:0000081,1.79e-17,11;CL:0000775,1.96e-13,3;CL:0000875,4.75e-13,3;CL:0002396,4.75e-13,3;CL:0000784,4.94e-12,3;CL:0000134,1.64e-10,354;CL:0002320,3.99e-10,361;CL:0000771,1.30e-09,2;CL:0000219,9.16e-09,386;CL:0000048,4.14e-07,427;CL:0000723,6.99e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.09e-56;42!CL:0000049;4.53e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.53e-53!102;UBERON:0003061!1.53e-53!102;UBERON:0002193!3.58e-50!112;UBERON:0002371!3.77e-38!80;UBERON:0002405!1.48e-36!115;UBERON:0001474!2.35e-34!86;UBERON:0004765!7.06e-27!101;UBERON:0001434!7.06e-27!101;UBERON:0003081!2.44e-18!216;UBERON:0000178!3.89e-14!15;UBERON:0000179!3.89e-14!15;UBERON:0000463!3.89e-14!15;UBERON:0002204!4.62e-11!167;UBERON:0002384!3.19e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.80e-16;15!UBERON:0000179;8.80e-16;15!UBERON:0000463;8.80e-16;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.22e-56,98;UBERON:0003061,4.22e-56,98;UBERON:0002193,4.26e-50,108;UBERON:0002371,7.07e-46,76;UBERON:0001474,5.60e-42,82;UBERON:0004765,1.40e-37,90;UBERON:0002405,4.00e-36,93;UBERON:0001434,4.60e-33,100;UBERON:0003081,2.08e-22,203;UBERON:0002204,1.02e-16,167;UBERON:0000178,9.32e-16,15;UBERON:0000179,9.32e-16,15;UBERON:0000463,9.32e-16,15;UBERON:0000926,3.55e-11,315;UBERON:0004120,3.55e-11,315;UBERON:0006603,3.55e-11,315;UBERON:0002384,1.34e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,2.30297638858328,1.23852898652861,0,0,0,0,0,0.587200878669695,0,1.00272223735071,0.434021741431704,0.447830948479849,0,0,1.01778767145695,0.755751887377619,0.727752183563449,1.39457422143411,1.6446715520873,1.23882548358041,1.43846196161075,1.5369642391746,1.6553756092201,1.37898272294647,0.645484683583826,1.35426486594342,1.88242339542605,1.36453075028923,1.57306439111559,2.44867113896722,0.962787081228281,1.27867425159808,1.64925650093358,1.19678194572979,2.13112375266347,2.61188314765726,0,3.73693349397345,3.51748131359441,2.60741459210101,1.73751075764093,0,0.736555271975129,1.58231193720442,1.69004229049553,1.91343869968539,2.51590374610051,0.786300418025466,0.750884464207532,1.44653028027372,4.27519115611873,4.17725022118089,2.37463399894024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0.174129737299267,0.398873881556595,2.14641561874808,1.14398982156026,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,11.8602375692457,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,1.23108503043699,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,8.98808428736619,5.9832291840805,9.94597232246485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,5.35246044999663,1.13929437434833,1.90585420366231,0.822724546172388,3.8908398671563,2.16012574895246,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0.842391534340376,0.456469358066384,0,0,0,0.321176150207399,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.751871343838829,0.709036767709349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0,0.129177819672012,0.186224142887574,0,0.0636471582781649,0,0,0,0.134704106029175,0.286888821570705,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p3@RNF149 | |||
}} |
Revision as of 04:39, 21 January 2014
Short description: | p3@RNF149 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RNF149_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -129bp_to_NM_173647_5end |
EntrezGene: | RNF149 |
HGNC: | 23137 |
UniProt: | Q8NC42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.22e-56 | 98 |
blood island | 4.22e-56 | 98 |
hemolymphoid system | 4.26e-50 | 108 |
bone marrow | 7.07e-46 | 76 |
bone element | 5.60e-42 | 82 |
skeletal element | 1.40e-37 | 90 |
immune system | 4.00e-36 | 93 |
skeletal system | 4.60e-33 | 100 |
lateral plate mesoderm | 2.08e-22 | 203 |
musculoskeletal system | 1.02e-16 | 167 |
blood | 9.32e-16 | 15 |
haemolymphatic fluid | 9.32e-16 | 15 |
organism substance | 9.32e-16 | 15 |
mesoderm | 3.55e-11 | 315 |
mesoderm-derived structure | 3.55e-11 | 315 |
presumptive mesoderm | 3.55e-11 | 315 |
connective tissue | 1.34e-09 | 371 |