FFCP PHASE1:Hg19::chr2:110970082..110970093,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=205251 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=27339 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=30bp_to_BC031315_5end | |||
|description=CAGE_peak_2_at_LINC00116_5end | |||
|id=chr2:110970082..110970093,- | |||
|ontology_enrichment_celltype=CL:0000222!9.10e-10!119;CL:0000680!6.22e-08!57;CL:0000056!6.22e-08!57;CL:0000355!6.22e-08!57;CL:0000183!6.29e-08!59;CL:0000055!8.16e-08!180;CL:0000187!3.48e-07!54;CL:0000220!7.25e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.68e-10,121;CL:0000680,1.12e-07,58;CL:0000056,1.12e-07,58;CL:0000355,1.12e-07,58;CL:0000187,6.51e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!3.35e-14!309;UBERON:0000119!5.12e-14!312;UBERON:0000475!2.49e-12!365;UBERON:0001981!2.17e-11!60;UBERON:0007500!2.17e-11!60;UBERON:0004537!2.17e-11!60;UBERON:0006965!2.17e-11!60;UBERON:0000025!2.33e-11!194;UBERON:0004872!3.62e-11!84;UBERON:0003914!8.66e-11!118;UBERON:0004111!2.07e-10!241;UBERON:0000481!4.31e-10!347;UBERON:0000055!4.39e-10!69;UBERON:0000486!4.55e-10!82;UBERON:0004290!4.97e-10!70;UBERON:0001134!1.31e-09!61;UBERON:0002036!1.31e-09!61;UBERON:0003082!1.31e-09!61;UBERON:0002100!1.32e-09!216;UBERON:0002385!2.84e-09!63;UBERON:0001015!2.84e-09!63;UBERON:0000383!2.84e-09!63;UBERON:0003104!6.01e-09!238;UBERON:0009142!6.01e-09!238;UBERON:0000914!6.95e-09!83;UBERON:0002329!6.95e-09!83;UBERON:0003077!6.95e-09!83;UBERON:0003059!6.95e-09!83;UBERON:0007282!6.95e-09!83;UBERON:0009618!6.95e-09!83;UBERON:0007285!6.95e-09!83;UBERON:0001637!8.55e-09!42;UBERON:0003509!8.55e-09!42;UBERON:0004572!8.55e-09!42;UBERON:0005256!9.39e-09!143;UBERON:0002049!9.43e-09!79;UBERON:0007798!9.43e-09!79;UBERON:0000490!9.74e-09!138;UBERON:0000477!3.21e-08!286;UBERON:0003103!1.04e-07!69;UBERON:0001009!3.54e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,3.88e-14,306;UBERON:0000119,6.01e-14,309;UBERON:0000025,9.03e-13,192;UBERON:0007500,8.26e-12,59;UBERON:0001981,8.26e-12,59;UBERON:0004537,8.26e-12,59;UBERON:0006965,8.26e-12,59;UBERON:0007503,8.44e-12,78;UBERON:0004872,1.09e-11,83;UBERON:0003914,1.55e-11,117;UBERON:0004111,9.46e-11,240;UBERON:0000055,2.43e-10,68;UBERON:0003077,4.77e-10,72;UBERON:0007285,4.77e-10,72;UBERON:0002329,4.80e-10,71;UBERON:0003059,4.80e-10,71;UBERON:0007282,4.80e-10,71;UBERON:0004290,4.80e-10,71;UBERON:0009618,4.80e-10,71;UBERON:0002100,8.26e-10,199;UBERON:0007524,1.38e-09,73;UBERON:0003104,1.71e-09,160;UBERON:0009142,1.71e-09,160;UBERON:0000486,1.92e-09,83;UBERON:0001134,2.17e-09,62;UBERON:0002036,2.17e-09,62;UBERON:0003082,2.17e-09,62;UBERON:0000490,2.76e-09,148;UBERON:0001637,2.96e-09,42;UBERON:0003509,2.96e-09,42;UBERON:0004572,2.96e-09,42;UBERON:0002385,4.48e-09,64;UBERON:0001015,4.48e-09,64;UBERON:0000383,4.48e-09,64;UBERON:0005256,7.08e-09,122;UBERON:0002049,9.88e-09,78;UBERON:0007798,9.88e-09,78;UBERON:0003103,2.91e-08,68;UBERON:0001009,1.87e-07,112;UBERON:0007100,6.62e-07,27;UBERON:0004573,8.22e-07,33;UBERON:0004571,8.22e-07,33 | |||
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| |||
|short_description=p2@LINC00116 | |||
}} |
Revision as of 04:53, 21 January 2014
Short description: | p2@LINC00116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LINC00116_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_BC031315_5end |
EntrezGene: | LINC00116 |
HGNC: | 27339 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.68e-10 | 121 |
muscle precursor cell | 1.12e-07 | 58 |
myoblast | 1.12e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.12e-07 | 58 |
muscle cell | 6.51e-07 | 55 |