FFCP PHASE1:Hg19::chr2:216252958..216252995,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216252958..216252995,+ | |||
|id=chr2:216252958..216252995,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.18e-29!180;CL:0000057!4.69e-20!75;CL:0002371!4.60e-18!591;CL:0000144!1.48e-17!625;CL:0000183!1.49e-13!59;CL:0000680!3.12e-13!57;CL:0000056!3.12e-13!57;CL:0000355!3.12e-13!57;CL:0000548!6.74e-13!679;CL:0000004!6.74e-13!679;CL:0000255!6.74e-13!679;CL:0000012!2.18e-12!682;CL:0000187!4.85e-12!54;CL:0000048!6.94e-12!430;CL:0000723!2.73e-11!436;CL:0000034!1.76e-10!444;CL:0000393!3.65e-10!60;CL:0000211!3.65e-10!60;CL:0002620!3.08e-09!23;CL:0002334!1.24e-08!12;CL:0000222!1.25e-08!119;CL:0000220!1.24e-07!246;CL:0002321!2.56e-07!248;CL:0000192!3.09e-07!42;CL:0000514!3.09e-07!42;CL:0000003!4.17e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.31e-16;55!CL:0000723;2.44e-15;61!CL:0000048;5.79e-14;58!CL:0000034;1.50e-11;69!CL:0002334;6.45e-11;12!CL:0002320;4.35e-10;188!CL:0002620;2.78e-09;23!CL:0000349;1.08e-08;19!CL:0002570;6.40e-08;8!CL:0000057;8.01e-08;73!CL:0000188;7.65e-07;9!CL:0002494;9.44e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.60e-22,427;CL:0000057,4.45e-22,76;CL:0000723,7.88e-22,433;CL:0000034,1.78e-20,441;CL:0002320,1.17e-14,361;CL:0000134,1.97e-12,354;CL:0000680,3.29e-11,58;CL:0000056,3.29e-11,58;CL:0000355,3.29e-11,58;CL:0002334,7.47e-11,12;CL:0000187,7.38e-10,55;CL:0000219,9.75e-10,386;CL:0002620,2.09e-09,23;CL:0000349,1.08e-08,19;CL:0002570,4.91e-08,8;CL:0000393,6.54e-08,61;CL:0000211,6.54e-08,61;CL:0000188,6.90e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.08e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.30e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.57e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.11e-16!83;UBERON:0002329!4.11e-16!83;UBERON:0003077!4.11e-16!83;UBERON:0003059!4.11e-16!83;UBERON:0007282!4.11e-16!83;UBERON:0009618!4.11e-16!83;UBERON:0007285!4.11e-16!83;UBERON:0004290!2.45e-14!70;UBERON:0005256!6.24e-14!143;UBERON:0000486!5.65e-12!82;UBERON:0001134!8.01e-12!61;UBERON:0002036!8.01e-12!61;UBERON:0003082!8.01e-12!61;UBERON:0002385!1.75e-11!63;UBERON:0001015!1.75e-11!63;UBERON:0000383!1.75e-11!63;UBERON:0000490!7.85e-09!138;UBERON:0002100!1.07e-08!216;UBERON:0002199!3.30e-08!45;UBERON:0002416!3.30e-08!45;UBERON:0004923!1.31e-07!57;UBERON:0003914!1.44e-07!118;UBERON:0004872!1.49e-07!84;UBERON:0001013!1.88e-07!14;UBERON:0000478!2.27e-07!24;UBERON:0005631!7.01e-07!14;UBERON:0000158!7.01e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.25e-09;198!UBERON:0001013;1.05e-08;14!UBERON:0004457;5.58e-07;9!UBERON:0000042;5.58e-07;9!UBERON:0002199;7.93e-07;46!UBERON:0002416;7.93e-07;46!UBERON:0000478;9.31e-07;24!UBERON:0002385;9.92e-07;31!UBERON:0001015;9.92e-07;31!UBERON:0000383;9.92e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.25e-15,371;UBERON:0007503,5.75e-12,78;UBERON:0007524,6.39e-12,73;UBERON:0002329,1.08e-11,71;UBERON:0003059,1.08e-11,71;UBERON:0007282,1.08e-11,71;UBERON:0004290,1.08e-11,71;UBERON:0009618,1.08e-11,71;UBERON:0003077,2.40e-11,72;UBERON:0007285,2.40e-11,72;UBERON:0002199,6.41e-10,46;UBERON:0002416,6.41e-10,46;UBERON:0001134,9.26e-10,62;UBERON:0002036,9.26e-10,62;UBERON:0003082,9.26e-10,62;UBERON:0000486,1.15e-09,83;UBERON:0000926,3.61e-09,315;UBERON:0004120,3.61e-09,315;UBERON:0006603,3.61e-09,315;UBERON:0005256,3.93e-09,122;UBERON:0002385,4.09e-09,64;UBERON:0001015,4.09e-09,64;UBERON:0000383,4.09e-09,64;UBERON:0001013,9.40e-09,14;UBERON:0003104,1.02e-08,160;UBERON:0009142,1.02e-08,160;UBERON:0002097,2.87e-08,41;UBERON:0000490,1.66e-07,148;UBERON:0000478,9.55e-07,24 | |||
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| |||
|short_description=p@chr2:216252958..216252995,+ | |||
}} |
Revision as of 08:22, 21 January 2014
Short description: | p@chr2:216252958..216252995, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216252958..216252995, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.60e-22 | 427 |
fibroblast | 4.45e-22 | 76 |
somatic stem cell | 7.88e-22 | 433 |
stem cell | 1.78e-20 | 441 |
connective tissue cell | 1.17e-14 | 361 |
mesenchymal cell | 1.97e-12 | 354 |
muscle precursor cell | 3.29e-11 | 58 |
myoblast | 3.29e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.29e-11 | 58 |
preadipocyte | 7.47e-11 | 12 |
muscle cell | 7.38e-10 | 55 |
motile cell | 9.75e-10 | 386 |
skin fibroblast | 2.09e-09 | 23 |
extraembryonic cell | 1.08e-08 | 19 |
mesenchymal stem cell of adipose | 4.91e-08 | 8 |
electrically responsive cell | 6.54e-08 | 61 |
electrically active cell | 6.54e-08 | 61 |
cell of skeletal muscle | 6.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.25e-15 | 371 |
epithelial vesicle | 5.75e-12 | 78 |
dense mesenchyme tissue | 6.39e-12 | 73 |
somite | 1.08e-11 | 71 |
presomitic mesoderm | 1.08e-11 | 71 |
presumptive segmental plate | 1.08e-11 | 71 |
dermomyotome | 1.08e-11 | 71 |
trunk paraxial mesoderm | 1.08e-11 | 71 |
paraxial mesoderm | 2.40e-11 | 72 |
presumptive paraxial mesoderm | 2.40e-11 | 72 |
integument | 6.41e-10 | 46 |
integumental system | 6.41e-10 | 46 |
skeletal muscle tissue | 9.26e-10 | 62 |
striated muscle tissue | 9.26e-10 | 62 |
myotome | 9.26e-10 | 62 |
multilaminar epithelium | 1.15e-09 | 83 |
mesoderm | 3.61e-09 | 315 |
mesoderm-derived structure | 3.61e-09 | 315 |
presumptive mesoderm | 3.61e-09 | 315 |
trunk mesenchyme | 3.93e-09 | 122 |
muscle tissue | 4.09e-09 | 64 |
musculature | 4.09e-09 | 64 |
musculature of body | 4.09e-09 | 64 |
adipose tissue | 9.40e-09 | 14 |
mesenchyme | 1.02e-08 | 160 |
entire embryonic mesenchyme | 1.02e-08 | 160 |
skin of body | 2.87e-08 | 41 |
unilaminar epithelium | 1.66e-07 | 148 |
extraembryonic structure | 9.55e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.57e-09 | 14 |