FFCP PHASE1:Hg19::chr3:185999018..185999033,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1608 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2853 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000482566_5end | |||
|description=CAGE_peak_4_at_DGKG_5end | |||
|id=chr3:185999018..185999033,- | |||
|ontology_enrichment_celltype=CL:0000055!1.37e-22!180;CL:0000680!1.81e-19!57;CL:0000056!1.81e-19!57;CL:0000355!1.81e-19!57;CL:0000183!1.09e-17!59;CL:0000187!1.19e-16!54;CL:0000393!5.57e-14!60;CL:0000211!5.57e-14!60;CL:0000192!1.31e-12!42;CL:0000514!1.31e-12!42;CL:0000359!5.81e-10!32;CL:0000222!7.70e-10!119;CL:0000144!4.01e-08!625;CL:0000048!5.16e-08!430;CL:0000188!9.14e-08!9;CL:0002371!1.06e-07!591;CL:0000723!1.47e-07!436;CL:0000548!3.70e-07!679;CL:0000004!3.70e-07!679;CL:0000255!3.70e-07!679;CL:0000034!5.53e-07!444;CL:0000012!5.80e-07!682;CL:0002556!8.59e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002582;4.66e-16;3!CL:0000359;2.03e-12;32!CL:0002583;1.56e-10;2!CL:0002334;3.28e-10;12!CL:0000192;1.25e-08;43!CL:0002539;4.26e-08;10!CL:0000708;1.03e-07;3!CL:0000346;1.14e-07;3!CL:1000428;1.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002582,4.02e-16,3;CL:0000359,4.06e-13,32;CL:0000192,2.31e-11,43;CL:0000514,2.31e-11,43;CL:0000680,2.62e-11,58;CL:0000056,2.62e-11,58;CL:0000355,2.62e-11,58;CL:0002583,1.49e-10,2;CL:0002334,3.03e-10,12;CL:0000187,4.00e-10,55;CL:0000393,6.69e-09,61;CL:0000211,6.69e-09,61;CL:0002539,5.15e-08,10;CL:0000346,1.07e-07,3;CL:1000428,1.07e-07,3;CL:0000708,1.39e-07,3;CL:0000222,9.16e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.25e-08;43!CL:0000355;1.75e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!2.60e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0060072;2.46e-11;4!DOID:0060084;2.67e-07;3!DOID:127;2.67e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,1.33e-11,4;DOID:0060084,1.44e-07,3;DOID:127,1.44e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.71e-23!83;UBERON:0002329!3.71e-23!83;UBERON:0003077!3.71e-23!83;UBERON:0003059!3.71e-23!83;UBERON:0007282!3.71e-23!83;UBERON:0009618!3.71e-23!83;UBERON:0007285!3.71e-23!83;UBERON:0004290!1.16e-19!70;UBERON:0001134!1.91e-17!61;UBERON:0002036!1.91e-17!61;UBERON:0003082!1.91e-17!61;UBERON:0002385!1.55e-16!63;UBERON:0001015!1.55e-16!63;UBERON:0000383!1.55e-16!63;UBERON:0000486!6.14e-15!82;UBERON:0005256!7.02e-15!143;UBERON:0000490!1.47e-09!138;UBERON:0002100!1.99e-08!216;UBERON:0001637!3.82e-07!42;UBERON:0003509!3.82e-07!42;UBERON:0004572!3.82e-07!42;UBERON:0004573!3.85e-07!33;UBERON:0004571!3.85e-07!33;UBERON:0000475!4.74e-07!365;UBERON:0001758!8.59e-07!6;UBERON:0003672!8.59e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.05e-09;33!UBERON:0004571;3.05e-09;33!UBERON:0004237;4.26e-08;10!UBERON:0004695;4.26e-08;10!UBERON:0002111;4.26e-08;10!UBERON:0004178;4.26e-08;10!UBERON:0003210;1.03e-07;3!UBERON:0000412;1.14e-07;3!UBERON:0001992;1.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.72e-12,78;UBERON:0002329,4.62e-12,71;UBERON:0003059,4.62e-12,71;UBERON:0007282,4.62e-12,71;UBERON:0004290,4.62e-12,71;UBERON:0009618,4.62e-12,71;UBERON:0003077,7.52e-12,72;UBERON:0007285,7.52e-12,72;UBERON:0007524,1.21e-11,73;UBERON:0001134,2.08e-10,62;UBERON:0002036,2.08e-10,62;UBERON:0003082,2.08e-10,62;UBERON:0004573,2.72e-10,33;UBERON:0004571,2.72e-10,33;UBERON:0002385,5.30e-10,64;UBERON:0001015,5.30e-10,64;UBERON:0000383,5.30e-10,64;UBERON:0000486,7.30e-10,83;UBERON:0004237,5.15e-08,10;UBERON:0004695,5.15e-08,10;UBERON:0002111,5.15e-08,10;UBERON:0004178,5.15e-08,10;UBERON:0001637,9.06e-08,42;UBERON:0003509,9.06e-08,42;UBERON:0004572,9.06e-08,42;UBERON:0005256,1.03e-07,122;UBERON:0000412,1.07e-07,3;UBERON:0001992,1.07e-07,3;UBERON:0003210,1.39e-07,3 | |||
|phase1_expression=1.45342703416445,0.428201047781966,0.704772020479856,0,0,0,0,0,0,0.737201809504527,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,3.61616716814386,0.730310090387373,2.43966399395253,0.246242116153576,0.408001382488506,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.378139268656271,0.443458794925128,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0.140450806702248,0,0.491337269247072,0,0,0,0,0,0.673344455816265,0.125118519871964,0.277064115484183,0.877955241761676,0.30648779579902,0.150238058906597,0.680593098960126,0.179389635688862,0.427114777637135,0,0,0,0,0.558350568994769,0.337552664482532,0.0974370051611986,0,0,0,0,0.705264687593482,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,6.90674606762403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57351715447788,0,0,0,0,0,0,5.77325368101093,0.231860809950154,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,1.12131084345361,0.87192013766656,17.0144823104604,0.646358578788889,0,0,0,0,0,0,0.532844358032199,0,0,0,0.325736184293735,0,0,2.41151501647669,3.48613383440118,0.799783929456456,0,0,0,0.239624855491583,0,1.42636905040718,2.75084482668401,0.821905290201534,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.601892199455438,0,0,0,0.737476674166813,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,1.69630663182921,1.24293207719189,4.18848495670427,11.9428518712233,1.62694529843943,0,0,0,0.114814448164607,0,0,0,0.462092022626489,0,0,0.316654886678627,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.462145851343933,0,0.413509717453592,0.429680979473094,0.290033387828457,0.767039646744908,0.0890320356467374,0,0,0,0,0,0,1.3940745403212,0,1.06461206063404,0,1.66791797193528,0.286249773483982,1.116475108079,0,0,0,0,1.27281299170375,0,0.359744915166629,0.54907405947211,0.589062011728432,1.2130948894399,0,0.842516912477962,0,0.487426979262569,0,0.136499911407986,0.424216295861138,0,1.65409603063837,1.32687795048244,0,0,0,0.202910376962704,0,0.845086807596724,0.286822704408103,0,0,1.77380532035299,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0,0,0.0986434056369336,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64450309576101,1.39100228192093,0,0,0,0,0,0,0,0,0,0,0,2.03856309110421,1.77824838730966,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709048640765013,0.576911008668165,0.337017719270924,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6656339884601,0,0,0,0,0,0,1.72844298240254,1.95952416065645,0,0.082092520749339,0.851940108927109,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,1.24349760466224,0.147855149989634,0.955780602982214,0.449803112163605,0.776314784381297,3.7323558705677,0.797525143673985,0,0.601030435988874,0,3.25496586563729,0.181848659202559,0.966695013382396,0.464033759878494,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0.706756583783524,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,3.4517996303005,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0.0679697329768317,0,0,2.00216523405724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@DGKG | |||
}} |
Revision as of 23:05, 21 January 2014
Short description: | p4@DGKG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DGKG_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000482566_5end |
EntrezGene: | DGKG |
HGNC: | 2853 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 4.02e-16 | 3 |
vascular associated smooth muscle cell | 4.06e-13 | 32 |
smooth muscle cell | 2.31e-11 | 43 |
smooth muscle myoblast | 2.31e-11 | 43 |
muscle precursor cell | 2.62e-11 | 58 |
myoblast | 2.62e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.62e-11 | 58 |
subcutaneous preadipocyte | 1.49e-10 | 2 |
preadipocyte | 3.03e-10 | 12 |
muscle cell | 4.00e-10 | 55 |
electrically responsive cell | 6.69e-09 | 61 |
electrically active cell | 6.69e-09 | 61 |
aortic smooth muscle cell | 5.15e-08 | 10 |
hair follicle dermal papilla cell | 1.07e-07 | 3 |
stem cell of epidermis | 1.07e-07 | 3 |
leptomeningeal cell | 1.39e-07 | 3 |
mesodermal cell | 9.16e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.72e-12 | 78 |
somite | 4.62e-12 | 71 |
presomitic mesoderm | 4.62e-12 | 71 |
presumptive segmental plate | 4.62e-12 | 71 |
dermomyotome | 4.62e-12 | 71 |
trunk paraxial mesoderm | 4.62e-12 | 71 |
paraxial mesoderm | 7.52e-12 | 72 |
presumptive paraxial mesoderm | 7.52e-12 | 72 |
dense mesenchyme tissue | 1.21e-11 | 73 |
skeletal muscle tissue | 2.08e-10 | 62 |
striated muscle tissue | 2.08e-10 | 62 |
myotome | 2.08e-10 | 62 |
systemic artery | 2.72e-10 | 33 |
systemic arterial system | 2.72e-10 | 33 |
muscle tissue | 5.30e-10 | 64 |
musculature | 5.30e-10 | 64 |
musculature of body | 5.30e-10 | 64 |
multilaminar epithelium | 7.30e-10 | 83 |
blood vessel smooth muscle | 5.15e-08 | 10 |
arterial system smooth muscle | 5.15e-08 | 10 |
artery smooth muscle tissue | 5.15e-08 | 10 |
aorta smooth muscle tissue | 5.15e-08 | 10 |
artery | 9.06e-08 | 42 |
arterial blood vessel | 9.06e-08 | 42 |
arterial system | 9.06e-08 | 42 |
trunk mesenchyme | 1.03e-07 | 122 |
dermal papilla | 1.07e-07 | 3 |
papillary layer of dermis | 1.07e-07 | 3 |
blood-cerebrospinal fluid barrier | 1.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 1.33e-11 | 4 |
cell type benign neoplasm | 1.44e-07 | 3 |
leiomyoma | 1.44e-07 | 3 |