FFCP PHASE1:Hg19::chr4:26322673..26322684,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3516 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5724 | |||
|TSSclassifier=strong | |||
|UniProt=D6RE93 | |||
|association_with_transcript=-302bp_to_ENST00000505958_5end | |||
|description=CAGE_peak_11_at_RBPJ_5end | |||
|id=chr4:26322673..26322684,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.16e-17!42;CL:0000766!2.62e-15!76;CL:0000860!2.01e-14!45;CL:0002009!2.56e-14!65;CL:0002194!4.03e-13!63;CL:0000576!4.03e-13!63;CL:0000040!4.03e-13!63;CL:0000559!4.03e-13!63;CL:0000557!5.04e-13!71;CL:0000839!1.90e-11!70;CL:0000738!1.60e-08!140;CL:0000763!1.97e-08!112;CL:0000049!1.97e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.57e-12;6!CL:0002397;1.57e-12;6!CL:0000860;8.43e-12;33!CL:0002057;8.43e-12;33!CL:0000576;4.84e-11;48!CL:0000840;1.35e-10;5!CL:0000094;1.80e-09;8!CL:0000056;4.20e-09;4!CL:0000081;7.81e-09;11!CL:0000766;1.57e-08;69!CL:0000473;1.32e-07;39!CL:0000234;1.32e-07;39!CL:0002582;1.97e-07;3!CL:0000135;3.63e-07;3!CL:0000388;3.63e-07;3!CL:0000515;4.84e-07;3!CL:0000990;7.48e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.07e-19,72;CL:0000860,4.46e-18,42;CL:0002057,4.46e-18,42;CL:0002009,7.04e-18,61;CL:0000557,1.25e-15,67;CL:0002194,2.42e-15,59;CL:0000576,2.42e-15,59;CL:0000040,2.42e-15,59;CL:0000559,2.42e-15,59;CL:0000473,4.64e-15,48;CL:0000234,4.64e-15,48;CL:0000763,2.10e-13,108;CL:0000049,2.10e-13,108;CL:0000839,5.02e-13,66;CL:0000738,4.45e-12,136;CL:0000840,1.39e-10,5;CL:0001029,1.39e-10,5;CL:0000034,5.60e-10,441;CL:0000048,8.49e-10,427;CL:0000988,9.15e-10,177;CL:0000094,9.87e-10,8;CL:0000515,1.05e-09,4;CL:0000723,2.04e-09,433;CL:0000081,3.51e-09,11;CL:0000037,1.32e-08,168;CL:0002087,3.44e-08,115;CL:0002032,4.68e-08,161;CL:0000837,4.68e-08,161;CL:0002393,4.88e-08,9;CL:0002397,4.88e-08,9;CL:0002320,5.42e-08,361;CL:0000134,6.84e-08,354;CL:0002031,9.44e-08,120;CL:0000135,3.59e-07,3;CL:0000388,3.59e-07,3;CL:0002582,4.73e-07,3;CL:0000990,7.62e-07,8;CL:0000219,7.84e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.09e-13;42!CL:0000515;4.20e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.78e-15!102;UBERON:0003061!9.78e-15!102;UBERON:0002204!3.55e-14!167;UBERON:0004765!6.79e-14!101;UBERON:0001434!6.79e-14!101;UBERON:0002371!2.21e-12!80;UBERON:0002193!4.75e-12!112;UBERON:0001474!1.54e-11!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.63e-07;3!UBERON:0000043;3.63e-07;3!UBERON:0007845;3.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.05e-19,167;UBERON:0002390,2.96e-18,98;UBERON:0003061,2.96e-18,98;UBERON:0002371,3.87e-17,76;UBERON:0001434,1.15e-15,100;UBERON:0002193,1.17e-15,108;UBERON:0001474,2.74e-15,82;UBERON:0004765,3.23e-13,90;UBERON:0002405,1.55e-12,93;UBERON:0000926,2.22e-08,315;UBERON:0004120,2.22e-08,315;UBERON:0006603,2.22e-08,315;UBERON:0003081,6.75e-08,203;UBERON:0002384,7.80e-08,371;UBERON:0007846,3.59e-07,3;UBERON:0000043,3.59e-07,3;UBERON:0007845,3.59e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0.436882744260345,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0.612002073732759,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,1.96682138424452,0.383829398097213,1.23852898652861,0,0,0,0,0,0,1.66198622559563,3.40925560699241,2.17010870715852,0.447830948479849,0.647787332037959,0.515151135268373,1.59938062657521,0.377875943688809,1.4555043671269,0.929716147622738,1.6446715520873,1.54853185447552,1.1507695692886,1.5369642391746,1.41889337933151,0,1.29096936716765,1.35426486594342,0.941211697713023,0,0.674170453335254,0.918251677112708,0.962787081228281,0.639337125799041,0.989553900560148,2.19410023383795,2.55734850319616,0.870627715885752,1.13477044938228,0.622822248995575,1.00499466102697,0.521482918420201,1.95469960234605,0,1.10483290796269,1.58231193720442,1.05627643155971,1.4882300997553,1.25795187305026,0.673971786878971,0.750884464207532,0,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.557052284425868,0,0,0,0.512365278902701,0.650296737799391,0,0,0,0.14828656316206,0,0,0.226618685395132,0,1.37450978193052,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,1.20964045934839,0.802320587350522,0.434473211648397,0,0,0,0.722878304769133,0.50133791063589,1.01392563272577,0,0,0,0.221729397462564,0.175669571386252,0.654895377488563,0,0,12.6573483525327,10.0995247633575,8.50930947320737,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0.496971951695318,0,1.19168262731897,0,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0,2.49728061464256,0,0.597794722207204,0.939475989150119,0.485618833104395,0.98315564691574,0.204154171254893,2.08818339430006,0.413303124703062,1.18800285728205,0,0,0,2.35670559535693,1.87677779807946,0.831192346452549,0.438977620880838,0.30648779579902,0.45071417671979,0,0.179389635688862,0.427114777637135,0,0.900273288253207,0.103052529238439,0,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0.0920498986422993,0.323292113637624,0,0.10075209822764,0,0,0,0,1.34171076742555,0.132529768321485,1.04574548582567,0.207322110030741,0.756962552626885,0.36497735907583,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0.891786973732369,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0.560655421726804,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,2.85273810081437,2.31650090668127,1.84928690295345,1.96967059563885,0,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0,0,1.27587750330633,0,2.99161459204025,2.90090859405225,0,0,0.271265023699736,0,0.356857977594324,0,0,0.300946099727719,0,0,0,0.737476674166813,0.434418072340414,0.391602314925481,2.05886054286514,1.03384013061444,1.72571360654893,0.853820462427555,0,0,0,0,0.920771839728375,0,0,0,0.321707842287215,0,0.616838775210622,0.710246901252508,2.05317890034523,1.03850885836724,2.09178681227927,0,0,0,0.574072240823034,0.910455840033585,0.655622074797121,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0.366277859273374,0.330037999682352,0,0,0,1.06337790121334,0.154048617114644,0.15350367472613,0.275673144969061,0,0.145016693914229,0.170453254832202,0.178064071293475,0,0,0.255225424989168,0,0.464845549297286,6.2962469366128,0,0,0,2.60979897622522,0.18532421910392,0.429374660225974,0,0.316379424718726,0,0.255897791311334,0.855877976067841,0,0,0.539617372749944,0.274537029736055,0.589062011728432,0,0,0,0,0.243713489631284,0,0.409499734223957,0.282810863907425,0,0,0,1.75380354101505,1.15755106853338,1.31178950409327,0,0.30982349809975,0,0.143411352204052,0,0.35667105148125,1.06428319221179,2.32218398827431,4.61012850143863,1.51789269506286,0.349934720244983,0,0,0,0.188287601553558,0.43050537267123,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0,1.94541993357815,1.08006287447623,0,7.47768497892312,0,0,0,0.144269212976445,0.213425530045242,0,0.399158742865633,0.191505370132367,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0.851692475380653,1.03051603426729,0,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0.33307196799782,0,0,0.439524537815682,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0,0.538651809526579,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,1.77912677208373,0.988511511572023,1.77517314159274,1.01101699471016,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| |||
|short_description=p11@RBPJ | |||
}} |
Revision as of 00:34, 22 January 2014
Short description: | p11@RBPJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RBPJ_5end |
Coexpression cluster: | NA |
Association with transcript: | -302bp_to_ENST00000505958_5end |
EntrezGene: | RBPJ |
HGNC: | 5724 |
UniProt: | D6RE93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 8.05e-19 | 167 |
hematopoietic system | 2.96e-18 | 98 |
blood island | 2.96e-18 | 98 |
bone marrow | 3.87e-17 | 76 |
skeletal system | 1.15e-15 | 100 |
hemolymphoid system | 1.17e-15 | 108 |
bone element | 2.74e-15 | 82 |
skeletal element | 3.23e-13 | 90 |
immune system | 1.55e-12 | 93 |
mesoderm | 2.22e-08 | 315 |
mesoderm-derived structure | 2.22e-08 | 315 |
presumptive mesoderm | 2.22e-08 | 315 |
lateral plate mesoderm | 6.75e-08 | 203 |
connective tissue | 7.80e-08 | 371 |
dense regular connective tissue | 3.59e-07 | 3 |
tendon | 3.59e-07 | 3 |
regular connective tissue | 3.59e-07 | 3 |